RNA–Protein interactions for RNA: ENST00000212355.8

TGFBR3-201, Transcript of transforming growth factor beta receptor 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TGFBR3, Length 6,465 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFBR3-201ENST00000212355 RAB18Q9NP72 206 aa12.03□□□□□ -0.48
TGFBR3-201ENST00000212355 ANKRD20A5PA0PJZ0 165 aa12.03□□□□□ -0.48
TGFBR3-201ENST00000212355 BCL2L2Q92843 193 aaPredicted RBP12.03□□□□□ -0.48
TGFBR3-201ENST00000212355 SCMH1Q96GD3 660 aa12.03□□□□□ -0.48
TGFBR3-201ENST00000212355 VSTM2LQ96N03 204 aa12.03□□□□□ -0.48
TGFBR3-201ENST00000212355 GABRG3Q99928 467 aa12.03□□□□□ -0.48
TGFBR3-201ENST00000212355 TRAF4Q9BUZ4 470 aaPredicted RBP12.03□□□□□ -0.48
TGFBR3-201ENST00000212355 GPR27Q9NS67 375 aa12.03□□□□□ -0.48
TGFBR3-201ENST00000212355 KLHDC2Q9Y2U9 406 aa12.03□□□□□ -0.48
TGFBR3-201ENST00000212355 SPINT1O43278 529 aa12.03□□□□□ -0.48
TGFBR3-201ENST00000212355 CT55Q8WUE5 264 aa12.03□□□□□ -0.48
TGFBR3-201ENST00000212355 RPEQ96AT9 228 aa12.03□□□□□ -0.48
TGFBR3-201ENST00000212355 ZMAT5Q9UDW3 170 aaKnown RBP12.03□□□□□ -0.48
TGFBR3-201ENST00000212355 CELA2AP08217 269 aa12.02□□□□□ -0.48
TGFBR3-201ENST00000212355 NSUN5P2Q63ZY6 315 aa12.02□□□□□ -0.48
TGFBR3-201ENST00000212355 CLEC18BQ6UXF7 455 aa12.02□□□□□ -0.48
TGFBR3-201ENST00000212355 MVB12AQ96EY5 273 aa12.02□□□□□ -0.48
TGFBR3-201ENST00000212355 RBM38Q9H0Z9 239 aaKnown RBP12.02□□□□□ -0.48
TGFBR3-201ENST00000212355 TMSB15BA0A087X1C1 80 aa12.02□□□□□ -0.49
TGFBR3-201ENST00000212355 WNT5AP41221 380 aa12.02□□□□□ -0.49
TGFBR3-201ENST00000212355 CLLU1Q5K131 121 aa12.02□□□□□ -0.49
TGFBR3-201ENST00000212355 WFDC3Q8IUB2 231 aa12.02□□□□□ -0.49
TGFBR3-201ENST00000212355 TPRX1Q8N7U7 411 aa12.02□□□□□ -0.49
TGFBR3-201ENST00000212355 LPAR5Q9H1C0 372 aa12.02□□□□□ -0.49
TGFBR3-201ENST00000212355 CHST1O43916 411 aa12.02□□□□□ -0.49
TGFBR3-201ENST00000212355 CST4P01036 141 aa12.02□□□□□ -0.49
TGFBR3-201ENST00000212355 GAPTQ8N292 157 aa12.02□□□□□ -0.49
TGFBR3-201ENST00000212355 CLEC1BQ9P126 229 aa12.02□□□□□ -0.49
TGFBR3-201ENST00000212355 PCDHGA9Q9Y5G4 932 aaKnown RBP12.02□□□□□ -0.49
TGFBR3-201ENST00000212355 IGLV3-16A0A075B6K0 115 aa12.02□□□□□ -0.49
TGFBR3-201ENST00000212355 CDIPTO14735 213 aa12.02□□□□□ -0.49
TGFBR3-201ENST00000212355 MRPL24Q96A35 216 aaKnown RBP12.02□□□□□ -0.49
TGFBR3-201ENST00000212355 RREB1Q92766 1687 aa12.02□□□□□ -0.49
TGFBR3-201ENST00000212355 MKRN2OSH3BPM6 223 aa12.02□□□□□ -0.49
TGFBR3-201ENST00000212355 TMEM241Q24JQ0 296 aa12.02□□□□□ -0.49
TGFBR3-201ENST00000212355 SPEM1Q8N4L4 309 aa12.02□□□□□ -0.49
TGFBR3-201ENST00000212355 ASB13Q8WXK3 278 aa12.02□□□□□ -0.49
TGFBR3-201ENST00000212355 TTC9Q92623 222 aa12.02□□□□□ -0.49
TGFBR3-201ENST00000212355 TRIP12Q14669 1992 aaPredicted RBP12.02□□□□□ -0.49
TGFBR3-201ENST00000212355 ST8SIA5O15466 376 aa12.01□□□□□ -0.49
TGFBR3-201ENST00000212355 GPR3P46089 330 aa12.01□□□□□ -0.49
TGFBR3-201ENST00000212355 SLC25A1P53007 311 aa12.01□□□□□ -0.49
TGFBR3-201ENST00000212355 PP6455Q8WZ26 134 aa12.01□□□□□ -0.49
TGFBR3-201ENST00000212355 SNX22Q96L94 193 aa12.01□□□□□ -0.49
TGFBR3-201ENST00000212355 SOSTQ9BQB4 213 aa12.01□□□□□ -0.49
TGFBR3-201ENST00000212355 CCL28Q9NRJ3 127 aa12.01□□□□□ -0.49
TGFBR3-201ENST00000212355 PPIL1Q9Y3C6 166 aa12.01□□□□□ -0.49
TGFBR3-201ENST00000212355 LRRC3CA6NJW4 275 aa12.01□□□□□ -0.49
TGFBR3-201ENST00000212355 PNPP00491 289 aa12.01□□□□□ -0.49
TGFBR3-201ENST00000212355 CD40P25942 277 aa12.01□□□□□ -0.49
TGFBR3-201ENST00000212355 SLC35B1P78383 322 aa12.01□□□□□ -0.49
TGFBR3-201ENST00000212355 RSPO4Q2I0M5 234 aaPredicted RBP12.01□□□□□ -0.49
TGFBR3-201ENST00000212355 AWAT1Q58HT5 328 aa12.01□□□□□ -0.49
TGFBR3-201ENST00000212355 C19orf43Q9BQ61 176 aa12.01□□□□□ -0.49
TGFBR3-201ENST00000212355 SLC26A1Q9H2B4 701 aa12.01□□□□□ -0.49
TGFBR3-201ENST00000212355 IL36GQ9NZH8 169 aa12.01□□□□□ -0.49
TGFBR3-201ENST00000212355 TINAGQ9UJW2 476 aa12.01□□□□□ -0.49
TGFBR3-201ENST00000212355 ZNF137PP52743 207 aa12.01□□□□□ -0.49
TGFBR3-201ENST00000212355 RTP5Q14D33 572 aa12.01□□□□□ -0.49
TGFBR3-201ENST00000212355 ZNF260Q3ZCT1 412 aa12.01□□□□□ -0.49
TGFBR3-201ENST00000212355 EDARADDQ8WWZ3 215 aa12.01□□□□□ -0.49
TGFBR3-201ENST00000212355 PTP4A1Q93096 173 aa12.01□□□□□ -0.49
TGFBR3-201ENST00000212355 ZNF707Q96C28 371 aaPredicted RBP12.01□□□□□ -0.49
TGFBR3-201ENST00000212355 NUDT19A8MXV4 375 aa12.01□□□□□ -0.49
TGFBR3-201ENST00000212355 MPLP40238 635 aa12.01□□□□□ -0.49
TGFBR3-201ENST00000212355 RPEL1Q2QD12 228 aa12.01□□□□□ -0.49
TGFBR3-201ENST00000212355 RNF165Q6ZSG1 346 aa12.01□□□□□ -0.49
TGFBR3-201ENST00000212355 LYZL2Q7Z4W2 148 aa12.01□□□□□ -0.49
TGFBR3-201ENST00000212355 ARL6IP6Q8N6S5 226 aa12.01□□□□□ -0.49
TGFBR3-201ENST00000212355 RND1Q92730 232 aa12.01□□□□□ -0.49
TGFBR3-201ENST00000212355 STRCQ7RTU9 1775 aa12.01□□□□□ -0.49
TGFBR3-201ENST00000212355 MT-CO3P00414 261 aa12.01□□□□□ -0.49
TGFBR3-201ENST00000212355 MRPL54Q6P161 138 aaKnown RBP12.01□□□□□ -0.49
TGFBR3-201ENST00000212355 OR2C3Q8N628 320 aa12.01□□□□□ -0.49
TGFBR3-201ENST00000212355 ATP5SQ99766 215 aa12.01□□□□□ -0.49
TGFBR3-201ENST00000212355 TMEM147Q9BVK8 224 aa12.01□□□□□ -0.49
TGFBR3-201ENST00000212355 MRPS18BQ9Y676 258 aaKnown RBP12.01□□□□□ -0.49
TGFBR3-201ENST00000212355 CCL3P10147 92 aa12□□□□□ -0.49
TGFBR3-201ENST00000212355 HTR1DP28221 377 aa12□□□□□ -0.49
TGFBR3-201ENST00000212355 MOGAT3Q86VF5 341 aa12□□□□□ -0.49
TGFBR3-201ENST00000212355 ZDHHC22Q8N966 263 aa12□□□□□ -0.49
TGFBR3-201ENST00000212355 M1APQ8TC57 530 aa12□□□□□ -0.49
TGFBR3-201ENST00000212355 AAMDCQ9H7C9 122 aa12□□□□□ -0.49
TGFBR3-201ENST00000212355 TUSC1Q2TAM9 212 aa12□□□□□ -0.49
TGFBR3-201ENST00000212355 SLC35E4Q6ICL7 350 aa12□□□□□ -0.49
TGFBR3-201ENST00000212355 LOC389332A0A1B0GUA5 103 aa12□□□□□ -0.49
TGFBR3-201ENST00000212355 LILRA5A6NI73 299 aa12□□□□□ -0.49
TGFBR3-201ENST00000212355 GABRA1P14867 456 aa12□□□□□ -0.49
TGFBR3-201ENST00000212355 KCNJ3P48549 501 aa12□□□□□ -0.49
TGFBR3-201ENST00000212355 LGALSLQ3ZCW2 172 aaPredicted RBP12□□□□□ -0.49
TGFBR3-201ENST00000212355 PRR7Q8TB68 274 aa12□□□□□ -0.49
TGFBR3-201ENST00000212355 FAM210BQ96KR6 192 aa12□□□□□ -0.49
TGFBR3-201ENST00000212355 MS4A10Q96PG2 267 aa12□□□□□ -0.49
TGFBR3-201ENST00000212355 UBTD1Q9HAC8 227 aa12□□□□□ -0.49
TGFBR3-201ENST00000212355 PEBP1P30086 187 aaKnown RBP12□□□□□ -0.49
TGFBR3-201ENST00000212355 PRSS3P2Q8NHM4 247 aa12□□□□□ -0.49
TGFBR3-201ENST00000212355 TECRQ9NZ01 308 aaKnown RBP12□□□□□ -0.49
TGFBR3-201ENST00000212355 COL4A1P02462 1669 aa12□□□□□ -0.49
TGFBR3-201ENST00000212355 ADAMTSL3P82987 1691 aa12□□□□□ -0.49
TGFBR3-201ENST00000212355 LMX1BO60663 402 aa12□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms