RNA–Protein interactions for RNA: ENST00000011700.10

VPS13D-201, Transcript of vacuolar protein sorting 13 homolog D, humanhuman

TSL 1 (best)

Gene VPS13D, Length 10,969 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13D-201ENST00000011700 P2RY10O00398 339 aa5.44□□□□□ -1.54
VPS13D-201ENST00000011700 ZNF195O14628 629 aa5.44□□□□□ -1.54
VPS13D-201ENST00000011700 HOXB1P14653 301 aaPredicted RBP5.44□□□□□ -1.54
VPS13D-201ENST00000011700 TGFBR1P36897 503 aa5.44□□□□□ -1.54
VPS13D-201ENST00000011700 CDKN2AP42771 156 aaKnown RBP5.44□□□□□ -1.54
VPS13D-201ENST00000011700 RPL18Q07020 188 aaKnown RBP5.44□□□□□ -1.54
VPS13D-201ENST00000011700 COL19A1Q14993 1142 aa5.44□□□□□ -1.54
VPS13D-201ENST00000011700 INPP5JQ15735 1006 aaPredicted RBP5.44□□□□□ -1.54
VPS13D-201ENST00000011700 Q3ZCU0 254 aa5.44□□□□□ -1.54
VPS13D-201ENST00000011700 TTC32Q5I0X7 151 aa5.44□□□□□ -1.54
VPS13D-201ENST00000011700 NLGN4XQ8N0W4 816 aa5.44□□□□□ -1.54
VPS13D-201ENST00000011700 BCORP1Q8N888 145 aa5.44□□□□□ -1.54
VPS13D-201ENST00000011700 OR5C1Q8NGR4 320 aa5.44□□□□□ -1.54
VPS13D-201ENST00000011700 NEUROG1Q92886 237 aa5.44□□□□□ -1.54
VPS13D-201ENST00000011700 GPR61Q9BZJ8 451 aa5.44□□□□□ -1.54
VPS13D-201ENST00000011700 TMEM9BQ9NQ34 198 aa5.44□□□□□ -1.54
VPS13D-201ENST00000011700 UQCR10Q9UDW1 63 aa5.44□□□□□ -1.54
VPS13D-201ENST00000011700 FBXO45P0C2W1 286 aa5.44□□□□□ -1.54
VPS13D-201ENST00000011700 FABP4P15090 132 aa5.44□□□□□ -1.54
VPS13D-201ENST00000011700 SLC19A1P41440 591 aa5.44□□□□□ -1.54
VPS13D-201ENST00000011700 P2RX3P56373 397 aa5.44□□□□□ -1.54
VPS13D-201ENST00000011700 LDLRAD1Q5T700 205 aa5.44□□□□□ -1.54
VPS13D-201ENST00000011700 PARM1Q6UWI2 310 aa5.44□□□□□ -1.54
VPS13D-201ENST00000011700 TCF24Q7RTU0 167 aa5.44□□□□□ -1.54
VPS13D-201ENST00000011700 OR10G8Q8NGN5 311 aa5.44□□□□□ -1.54
VPS13D-201ENST00000011700 ASB5Q8WWX0 329 aa5.44□□□□□ -1.54
VPS13D-201ENST00000011700 GALNT14Q96FL9 552 aa5.44□□□□□ -1.54
VPS13D-201ENST00000011700 TRMT61AQ96FX7 289 aaKnown RBP5.44□□□□□ -1.54
VPS13D-201ENST00000011700 MS4A5Q9H3V2 200 aa5.44□□□□□ -1.54
VPS13D-201ENST00000011700 DSCAMO60469 2012 aa5.44□□□□□ -1.54
VPS13D-201ENST00000011700 CCSO14618 274 aa5.44□□□□□ -1.54
VPS13D-201ENST00000011700 SLC25A17O43808 307 aa5.44□□□□□ -1.54
VPS13D-201ENST00000011700 SMPD2O60906 423 aa5.44□□□□□ -1.54
VPS13D-201ENST00000011700 HBZP02008 142 aa5.44□□□□□ -1.54
VPS13D-201ENST00000011700 ATF1P18846 271 aa5.44□□□□□ -1.54
VPS13D-201ENST00000011700 TWIST1Q15672 202 aa5.44□□□□□ -1.54
VPS13D-201ENST00000011700 TUSC1Q2TAM9 212 aa5.44□□□□□ -1.54
VPS13D-201ENST00000011700 LYPD8Q6UX82 237 aa5.44□□□□□ -1.54
VPS13D-201ENST00000011700 OR6X1Q8NH79 312 aa5.44□□□□□ -1.54
VPS13D-201ENST00000011700 LHFPL5Q8TAF8 219 aa5.44□□□□□ -1.54
VPS13D-201ENST00000011700 C2CD4CQ8TF44 421 aa5.44□□□□□ -1.54
VPS13D-201ENST00000011700 CLEC5AQ9NY25 188 aa5.44□□□□□ -1.54
VPS13D-201ENST00000011700 SOX21Q9Y651 276 aaPredicted RBP5.44□□□□□ -1.54
VPS13D-201ENST00000011700 SIRPB1O00241 398 aa5.44□□□□□ -1.54
VPS13D-201ENST00000011700 HIST1H1DP16402 221 aaKnown RBP5.44□□□□□ -1.54
VPS13D-201ENST00000011700 SLC38A11Q08AI6 406 aa5.44□□□□□ -1.54
VPS13D-201ENST00000011700 TCTN3Q6NUS6 607 aa5.44□□□□□ -1.54
VPS13D-201ENST00000011700 RND1Q92730 232 aa5.44□□□□□ -1.54
VPS13D-201ENST00000011700 MRPL38Q96DV4 380 aaKnown RBP5.44□□□□□ -1.54
VPS13D-201ENST00000011700 TAS2R4Q9NYW5 299 aa5.44□□□□□ -1.54
VPS13D-201ENST00000011700 NTNG1Q9Y2I2 539 aa5.44□□□□□ -1.54
VPS13D-201ENST00000011700 TNFRSF1BP20333 461 aa5.43□□□□□ -1.54
VPS13D-201ENST00000011700 NMUP48645 174 aa5.43□□□□□ -1.54
VPS13D-201ENST00000011700 SEMG2Q02383 582 aa5.43□□□□□ -1.54
VPS13D-201ENST00000011700 ACKR1Q16570 336 aa5.43□□□□□ -1.54
VPS13D-201ENST00000011700 ZNF528Q3MIS6 628 aa5.43□□□□□ -1.54
VPS13D-201ENST00000011700 FBXL14Q8N1E6 418 aa5.43□□□□□ -1.54
VPS13D-201ENST00000011700 OR52B4Q8NGK2 314 aa5.43□□□□□ -1.54
VPS13D-201ENST00000011700 SNRNP40Q96DI7 357 aaKnown RBP5.43□□□□□ -1.54
VPS13D-201ENST00000011700 SFRP2Q96HF1 295 aa5.43□□□□□ -1.54
VPS13D-201ENST00000011700 RASL11BQ9BPW5 248 aa5.43□□□□□ -1.54
VPS13D-201ENST00000011700 NRIP2Q9BQI9 281 aa5.43□□□□□ -1.54
VPS13D-201ENST00000011700 UBTD1Q9HAC8 227 aa5.43□□□□□ -1.54
VPS13D-201ENST00000011700 TRBV5-4A0A0C4DH59 114 aa5.43□□□□□ -1.54
VPS13D-201ENST00000011700 LMX1BO60663 402 aa5.43□□□□□ -1.54
VPS13D-201ENST00000011700 PRSS56P0CW18 603 aa5.43□□□□□ -1.54
VPS13D-201ENST00000011700 CD1CP29017 333 aa5.43□□□□□ -1.54
VPS13D-201ENST00000011700 RPS27LQ71UM5 84 aaKnown RBP5.43□□□□□ -1.54
VPS13D-201ENST00000011700 ZNF740Q8NDX6 193 aa5.43□□□□□ -1.54
VPS13D-201ENST00000011700 RAB1CQ92928 201 aa5.43□□□□□ -1.54
VPS13D-201ENST00000011700 DERL3Q96Q80 235 aa5.43□□□□□ -1.54
VPS13D-201ENST00000011700 DUSP13Q9UII6 198 aa5.43□□□□□ -1.54
VPS13D-201ENST00000011700 GDF2Q9UK05 429 aaPredicted RBP5.43□□□□□ -1.54
VPS13D-201ENST00000011700 MUC4Q99102 2169 aa5.43□□□□□ -1.54
VPS13D-201ENST00000011700 C17orf51A8MQB3 221 aa5.43□□□□□ -1.54
VPS13D-201ENST00000011700 C21orf140B9A014 251 aa5.43□□□□□ -1.54
VPS13D-201ENST00000011700 C11orf94C9JXX5 98 aa5.43□□□□□ -1.54
VPS13D-201ENST00000011700 IGHA1P01876 353 aa5.43□□□□□ -1.54
VPS13D-201ENST00000011700 IGHA2P01877 340 aa5.43□□□□□ -1.54
VPS13D-201ENST00000011700 PNLIPP16233 465 aa5.43□□□□□ -1.54
VPS13D-201ENST00000011700 GABRG2P18507 467 aa5.43□□□□□ -1.54
VPS13D-201ENST00000011700 PQLC2Q6ZP29 291 aa5.43□□□□□ -1.54
VPS13D-201ENST00000011700 Q6ZSR9 355 aa5.43□□□□□ -1.54
VPS13D-201ENST00000011700 GMLQ99445 158 aa5.43□□□□□ -1.54
VPS13D-201ENST00000011700 MARCH5Q9NX47 278 aa5.43□□□□□ -1.54
VPS13D-201ENST00000011700 STARD10Q9Y365 291 aa5.43□□□□□ -1.54
VPS13D-201ENST00000011700 PITX3O75364 302 aa5.43□□□□□ -1.54
VPS13D-201ENST00000011700 FCRLBQ6BAA4 426 aa5.43□□□□□ -1.54
VPS13D-201ENST00000011700 TEPPQ6URK8 271 aa5.43□□□□□ -1.54
VPS13D-201ENST00000011700 SLC16A11Q8NCK7 471 aa5.43□□□□□ -1.54
VPS13D-201ENST00000011700 PACRGQ96M98 296 aaPredicted RBP5.43□□□□□ -1.54
VPS13D-201ENST00000011700 C19orf67A6NJJ6 358 aa5.43□□□□□ -1.54
VPS13D-201ENST00000011700 B4E171 279 aa5.43□□□□□ -1.54
VPS13D-201ENST00000011700 TMEM262E9PQX1 116 aa5.43□□□□□ -1.54
VPS13D-201ENST00000011700 RECKO95980 971 aa5.43□□□□□ -1.54
VPS13D-201ENST00000011700 ZNF121P58317 390 aaPredicted RBP5.43□□□□□ -1.54
VPS13D-201ENST00000011700 OLIG2Q13516 323 aa5.43□□□□□ -1.54
VPS13D-201ENST00000011700 LEXMQ3ZCV2 418 aa5.43□□□□□ -1.54
VPS13D-201ENST00000011700 GPRIN1Q7Z2K8 1008 aa5.43□□□□□ -1.54
VPS13D-201ENST00000011700 SCCPDHQ8NBX0 429 aa5.43□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms