RNA–Protein interactions for RNA: ENSMUST00000108531.7

Nup88-203, Transcript of Nuclear pore complex protein Nup88, mousemouse

TSL 1 (best) BASIC

Gene Nup88, Length 2,453 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Nup88-203ENSMUST00000108531 AF067061O70616 171 aa11.41□□□□□ -0.58
Nup88-203ENSMUST00000108531 Zfp2P08043 459 aa11.41□□□□□ -0.58
Nup88-203ENSMUST00000108531 Itga5P11688 1053 aa11.41□□□□□ -0.58
Nup88-203ENSMUST00000108531 SftpcP21841 193 aa11.41□□□□□ -0.58
Nup88-203ENSMUST00000108531 PdgfbP31240 241 aa11.41□□□□□ -0.58
Nup88-203ENSMUST00000108531 Upk2P38575 184 aa11.41□□□□□ -0.58
Nup88-203ENSMUST00000108531 Srsf3P84104 164 aaKnown RBP11.41□□□□□ -0.58
Nup88-203ENSMUST00000108531 Trim63Q38HM4 350 aa11.41□□□□□ -0.58
Nup88-203ENSMUST00000108531 Gm1673Q3UR78 90 aa11.41□□□□□ -0.58
Nup88-203ENSMUST00000108531 Tmem211Q3UUA0 195 aa11.41□□□□□ -0.58
Nup88-203ENSMUST00000108531 Irgm1Q60766 409 aa11.41□□□□□ -0.58
Nup88-203ENSMUST00000108531 Nxph1Q61200 271 aa11.41□□□□□ -0.58
Nup88-203ENSMUST00000108531 Svs6Q64356 99 aa11.41□□□□□ -0.58
Nup88-203ENSMUST00000108531 Ceacam14Q78Y72 263 aa11.41□□□□□ -0.58
Nup88-203ENSMUST00000108531 Mfsd8Q8BH31 519 aa11.41□□□□□ -0.58
Nup88-203ENSMUST00000108531 Entpd8Q8K0L2 497 aa11.41□□□□□ -0.58
Nup88-203ENSMUST00000108531 Nt5mQ8VCE6 220 aa11.41□□□□□ -0.58
Nup88-203ENSMUST00000108531 SelenosQ9BCZ4 190 aa11.41□□□□□ -0.58
Nup88-203ENSMUST00000108531 Rtl8bQ9D1F0 113 aa11.41□□□□□ -0.58
Nup88-203ENSMUST00000108531 Tmem50bQ9D1X9 158 aa11.41□□□□□ -0.58
Nup88-203ENSMUST00000108531 HrgQ9ESB3 525 aa11.41□□□□□ -0.58
Nup88-203ENSMUST00000108531 Syt9Q9R0N9 491 aa11.41□□□□□ -0.58
Nup88-203ENSMUST00000108531 Cxcl15Q9WVL7 167 aa11.41□□□□□ -0.58
Nup88-203ENSMUST00000108531 Adamts20P59511 1906 aa11.41□□□□□ -0.58
Nup88-203ENSMUST00000108531 Arid1aA2BH40 2283 aaKnown RBP11.41□□□□□ -0.58
Nup88-203ENSMUST00000108531 Trav12n-2A0A075B626 113 aa11.41□□□□□ -0.58
Nup88-203ENSMUST00000108531 Mex3aG3UYU0 520 aaKnown RBP11.41□□□□□ -0.58
Nup88-203ENSMUST00000108531 Gm21721J3QMK7 227 aa11.41□□□□□ -0.58
Nup88-203ENSMUST00000108531 Klk1b3P00756 261 aa11.41□□□□□ -0.58
Nup88-203ENSMUST00000108531 Supt4h1aP63271 117 aa11.41□□□□□ -0.58
Nup88-203ENSMUST00000108531 JPT1P97825 154 aaKnown RBP11.41□□□□□ -0.58
Nup88-203ENSMUST00000108531 Cbx5Q61686 191 aaKnown RBP11.41□□□□□ -0.58
Nup88-203ENSMUST00000108531 Tra2aQ6PFR5 281 aaKnown RBP11.41□□□□□ -0.58
Nup88-203ENSMUST00000108531 Olfr1477Q7TQQ7 315 aa11.41□□□□□ -0.58
Nup88-203ENSMUST00000108531 Cbln2Q8BGU2 224 aa11.41□□□□□ -0.58
Nup88-203ENSMUST00000108531 Plekha1Q8BUL6 383 aa11.41□□□□□ -0.58
Nup88-203ENSMUST00000108531 Defb36Q8K3U4 67 aa11.41□□□□□ -0.58
Nup88-203ENSMUST00000108531 St8sia6Q8K4T1 398 aa11.41□□□□□ -0.58
Nup88-203ENSMUST00000108531 Olfr1324Q8VEU7 332 aa11.41□□□□□ -0.58
Nup88-203ENSMUST00000108531 Olfr559Q8VH14 318 aa11.41□□□□□ -0.58
Nup88-203ENSMUST00000108531 Edem1Q925U4 652 aa11.41□□□□□ -0.58
Nup88-203ENSMUST00000108531 Exosc8Q9D753 276 aaKnown RBP11.41□□□□□ -0.58
Nup88-203ENSMUST00000108531 Dnajc4Q9D844 244 aa11.41□□□□□ -0.58
Nup88-203ENSMUST00000108531 Znf319Q9ERR8 581 aa11.41□□□□□ -0.58
Nup88-203ENSMUST00000108531 LitafQ9JLJ0 161 aa11.41□□□□□ -0.58
Nup88-203ENSMUST00000108531 Tex101Q9JMI7 250 aa11.41□□□□□ -0.58
Nup88-203ENSMUST00000108531 Hebp2Q9WU63 205 aa11.41□□□□□ -0.58
Nup88-203ENSMUST00000108531 Gm5493S4R2D1 92 aa11.41□□□□□ -0.58
Nup88-203ENSMUST00000108531 Trbv15A0A0A6YYE3 115 aa11.4□□□□□ -0.58
Nup88-203ENSMUST00000108531 Pusl1A2ADA5 291 aa11.4□□□□□ -0.58
Nup88-203ENSMUST00000108531 Gm20834J3QM72 227 aa11.4□□□□□ -0.58
Nup88-203ENSMUST00000108531 Bmi1P25916 324 aa11.4□□□□□ -0.58
Nup88-203ENSMUST00000108531 Rab3cP62823 227 aa11.4□□□□□ -0.58
Nup88-203ENSMUST00000108531 Rasd2P63032 266 aa11.4□□□□□ -0.58
Nup88-203ENSMUST00000108531 Shc1P98083 579 aa11.4□□□□□ -0.58
Nup88-203ENSMUST00000108531 Tmem69Q3KQJ0 245 aa11.4□□□□□ -0.58
Nup88-203ENSMUST00000108531 HgsnatQ3UDW8 656 aa11.4□□□□□ -0.58
Nup88-203ENSMUST00000108531 Zfp772Q3UQL6 416 aa11.4□□□□□ -0.58
Nup88-203ENSMUST00000108531 Bahd1Q497V6 772 aa11.4□□□□□ -0.58
Nup88-203ENSMUST00000108531 Olfr10Q60883 311 aa11.4□□□□□ -0.58
Nup88-203ENSMUST00000108531 Pias2Q8C5D8 621 aa11.4□□□□□ -0.58
Nup88-203ENSMUST00000108531 Adhfe1Q8R0N6 465 aa11.4□□□□□ -0.58
Nup88-203ENSMUST00000108531 Olfr488Q8VG02 314 aa11.4□□□□□ -0.58
Nup88-203ENSMUST00000108531 Olfr1132Q8VG97 308 aa11.4□□□□□ -0.58
Nup88-203ENSMUST00000108531 Olfr340Q8VGL0 312 aa11.4□□□□□ -0.58
Nup88-203ENSMUST00000108531 Plekhf2Q91WB4 249 aa11.4□□□□□ -0.58
Nup88-203ENSMUST00000108531 Mrps28Q9CY16 186 aa11.4□□□□□ -0.58
Nup88-203ENSMUST00000108531 Wdr4Q9EP82 413 aa11.4□□□□□ -0.58
Nup88-203ENSMUST00000108531 Nat8Q9JIY7 227 aa11.4□□□□□ -0.58
Nup88-203ENSMUST00000108531 Ackr1Q9QUI6 334 aa11.4□□□□□ -0.58
Nup88-203ENSMUST00000108531 Gm16368A0A1Y7VNG9 144 aa11.4□□□□□ -0.59
Nup88-203ENSMUST00000108531 Mtg2A2AFK4 405 aa11.4□□□□□ -0.59
Nup88-203ENSMUST00000108531 Fam98cE9PYD1 344 aa11.4□□□□□ -0.59
Nup88-203ENSMUST00000108531 Gm8020F6WLE9 229 aa11.4□□□□□ -0.59
Nup88-203ENSMUST00000108531 Trav13d-3J3QMG8 112 aa11.4□□□□□ -0.59
Nup88-203ENSMUST00000108531 GamtO35969 236 aa11.4□□□□□ -0.59
Nup88-203ENSMUST00000108531 Igh-VJ558P01758 117 aa11.4□□□□□ -0.59
Nup88-203ENSMUST00000108531 GlulP15105 373 aa11.4□□□□□ -0.59
Nup88-203ENSMUST00000108531 Slc38a11Q3USY0 453 aa11.4□□□□□ -0.59
Nup88-203ENSMUST00000108531 Hsf5Q5ND04 624 aa11.4□□□□□ -0.59
Nup88-203ENSMUST00000108531 Gnb3Q61011 340 aa11.4□□□□□ -0.59
Nup88-203ENSMUST00000108531 Znf250Q7TNU6 535 aa11.4□□□□□ -0.59
Nup88-203ENSMUST00000108531 Fam57bQ7TNV1 275 aa11.4□□□□□ -0.59
Nup88-203ENSMUST00000108531 Dtx3Q80V91 347 aa11.4□□□□□ -0.59
Nup88-203ENSMUST00000108531 Paqr7Q80ZE4 345 aa11.4□□□□□ -0.59
Nup88-203ENSMUST00000108531 Clec2hQ8C1T8 218 aa11.4□□□□□ -0.59
Nup88-203ENSMUST00000108531 Olfr1309Q8VF83 320 aa11.4□□□□□ -0.59
Nup88-203ENSMUST00000108531 Olfr350Q8VFP8 312 aa11.4□□□□□ -0.59
Nup88-203ENSMUST00000108531 Olfr497Q8VG08 314 aa11.4□□□□□ -0.59
Nup88-203ENSMUST00000108531 1700025F22RikQ9D9Y7 111 aa11.4□□□□□ -0.59
Nup88-203ENSMUST00000108531 GlceQ9EPS3 618 aa11.4□□□□□ -0.59
Nup88-203ENSMUST00000108531 Csnk1eQ9JMK2 416 aaKnown RBP11.4□□□□□ -0.59
Nup88-203ENSMUST00000108531 Tex38A2A8T7 201 aa11.39□□□□□ -0.59
Nup88-203ENSMUST00000108531 Znf551B2RUI1 696 aa11.39□□□□□ -0.59
Nup88-203ENSMUST00000108531 Fbxw25F7C9P2 466 aa11.39□□□□□ -0.59
Nup88-203ENSMUST00000108531 Wnt2bO70283 389 aa11.39□□□□□ -0.59
Nup88-203ENSMUST00000108531 Ntsr1O88319 424 aa11.39□□□□□ -0.59
Nup88-203ENSMUST00000108531 Nme1P15532 152 aaKnown RBP11.39□□□□□ -0.59
Nup88-203ENSMUST00000108531 Atp4bP50992 294 aa11.39□□□□□ -0.59
Nup88-203ENSMUST00000108531 Spatc1Q148B6 480 aa11.39□□□□□ -0.59
Retrieved 100 of 22,080 RNA–protein pairs in 30.6 ms