RNA–Protein interactions for RNA: ENSMUST00000027367.13

Ctdsp1-201, Transcript of Carboxy-terminal domain RNA polymerase II polypeptide A small phosphatase 1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ctdsp1, Length 2,876 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ctdsp1-201ENSMUST00000027367 Ccl20O89093 97 aa17.79■□□□□ 0.44
Ctdsp1-201ENSMUST00000027367 Hprt1P00493 218 aa17.79■□□□□ 0.44
Ctdsp1-201ENSMUST00000027367 Htr2aP35363 471 aa17.79■□□□□ 0.44
Ctdsp1-201ENSMUST00000027367 RpiaP47968 303 aa17.79■□□□□ 0.44
Ctdsp1-201ENSMUST00000027367 Ube2mP61082 183 aaKnown RBP17.79■□□□□ 0.44
Ctdsp1-201ENSMUST00000027367 Csrp2P97314 193 aaKnown RBP17.79■□□□□ 0.44
Ctdsp1-201ENSMUST00000027367 Scand1Q2M4I6 142 aa17.79■□□□□ 0.44
Ctdsp1-201ENSMUST00000027367 CiartQ3TQ03 375 aa17.79■□□□□ 0.44
Ctdsp1-201ENSMUST00000027367 Ceacam19Q3TQ88 271 aa17.79■□□□□ 0.44
Ctdsp1-201ENSMUST00000027367 Fbxo7Q3U7U3 523 aa17.79■□□□□ 0.44
Ctdsp1-201ENSMUST00000027367 CybaQ61462 192 aa17.79■□□□□ 0.44
Ctdsp1-201ENSMUST00000027367 Phox2aQ62066 280 aa17.79■□□□□ 0.44
Ctdsp1-201ENSMUST00000027367 Usf2Q64705 346 aaKnown RBP17.79■□□□□ 0.44
Ctdsp1-201ENSMUST00000027367 Olfr517Q7TRU4 314 aa17.79■□□□□ 0.44
Ctdsp1-201ENSMUST00000027367 Olfr314Q7TRZ7 330 aa17.79■□□□□ 0.44
Ctdsp1-201ENSMUST00000027367 Krt33aQ8K0Y2 404 aa17.79■□□□□ 0.44
Ctdsp1-201ENSMUST00000027367 Slc25a28Q8R0Z5 364 aa17.79■□□□□ 0.44
Ctdsp1-201ENSMUST00000027367 Olfr497Q8VG08 314 aa17.79■□□□□ 0.44
Ctdsp1-201ENSMUST00000027367 HaghQ99KB8 309 aa17.79■□□□□ 0.44
Ctdsp1-201ENSMUST00000027367 1700034E13RikQ9D2T6 108 aa17.79■□□□□ 0.44
Ctdsp1-201ENSMUST00000027367 Arfgap3Q9D8S3 523 aa17.79■□□□□ 0.44
Ctdsp1-201ENSMUST00000027367 Cmtm2aQ9DAR1 169 aa17.79■□□□□ 0.44
Ctdsp1-201ENSMUST00000027367 Mmp16Q9WTR0 607 aa17.79■□□□□ 0.44
Ctdsp1-201ENSMUST00000027367 Wdfy4E9Q2M9 3149 aa17.79■□□□□ 0.44
Ctdsp1-201ENSMUST00000027367 P01746 140 aa17.79■□□□□ 0.44
Ctdsp1-201ENSMUST00000027367 GdnfP48540 211 aa17.79■□□□□ 0.44
Ctdsp1-201ENSMUST00000027367 Hist1h2baP70696 127 aa17.79■□□□□ 0.44
Ctdsp1-201ENSMUST00000027367 Pon3Q62087 354 aa17.79■□□□□ 0.44
Ctdsp1-201ENSMUST00000027367 Pif1Q80SX8 650 aa17.79■□□□□ 0.44
Ctdsp1-201ENSMUST00000027367 Col5a1O88207 1838 aa17.78■□□□□ 0.44
Ctdsp1-201ENSMUST00000027367 Gm5678A0A1B0GRG8 277 aa17.78■□□□□ 0.44
Ctdsp1-201ENSMUST00000027367 CymB7ZWD6 379 aa17.78■□□□□ 0.44
Ctdsp1-201ENSMUST00000027367 Q149G0 166 aaKnown RBP17.78■□□□□ 0.44
Ctdsp1-201ENSMUST00000027367 Lin54Q571G4 749 aa17.78■□□□□ 0.44
Ctdsp1-201ENSMUST00000027367 Klhl24Q8BRG6 600 aa17.78■□□□□ 0.44
Ctdsp1-201ENSMUST00000027367 Spem2Q8C5U4 503 aa17.78■□□□□ 0.44
Ctdsp1-201ENSMUST00000027367 Olfr24Q8VFM9 313 aa17.78■□□□□ 0.44
Ctdsp1-201ENSMUST00000027367 Utp23Q9CX11 249 aaKnown RBP17.78■□□□□ 0.44
Ctdsp1-201ENSMUST00000027367 Tex37Q9DAG4 180 aa17.78■□□□□ 0.44
Ctdsp1-201ENSMUST00000027367 Zmat3O54836 290 aaKnown RBP17.78■□□□□ 0.44
Ctdsp1-201ENSMUST00000027367 SftpcP21841 193 aa17.78■□□□□ 0.44
Ctdsp1-201ENSMUST00000027367 Q8BN57 294 aa17.78■□□□□ 0.44
Ctdsp1-201ENSMUST00000027367 GcaQ8VC88 220 aa17.78■□□□□ 0.44
Ctdsp1-201ENSMUST00000027367 Defb8Q91V82 60 aa17.78■□□□□ 0.44
Ctdsp1-201ENSMUST00000027367 Tex12Q9CR81 123 aa17.78■□□□□ 0.44
Ctdsp1-201ENSMUST00000027367 Ccdc167Q9D162 97 aa17.78■□□□□ 0.44
Ctdsp1-201ENSMUST00000027367 PipoxQ9D826 390 aa17.78■□□□□ 0.44
Ctdsp1-201ENSMUST00000027367 Slc2a8Q9JIF3 477 aa17.78■□□□□ 0.44
Ctdsp1-201ENSMUST00000027367 Ndufaf3Q9JKL4 185 aa17.78■□□□□ 0.44
Ctdsp1-201ENSMUST00000027367 Pkd1l3Q2EG98 2201 aa17.78■□□□□ 0.44
Ctdsp1-201ENSMUST00000027367 Olfr1112A2ATA0 318 aa17.77■□□□□ 0.44
Ctdsp1-201ENSMUST00000027367 H3f3aP84244 136 aaKnown RBP17.77■□□□□ 0.44
Ctdsp1-201ENSMUST00000027367 Fbll1Q80WS3 314 aaKnown RBP17.77■□□□□ 0.44
Ctdsp1-201ENSMUST00000027367 Olfr1233Q8VGN0 305 aa17.77■□□□□ 0.44
Ctdsp1-201ENSMUST00000027367 Tstd3Q9D0B5 157 aa17.77■□□□□ 0.44
Ctdsp1-201ENSMUST00000027367 Mmp1aQ9EPL5 464 aa17.77■□□□□ 0.44
Ctdsp1-201ENSMUST00000027367 Vmn1r48Q9EQ52 302 aa17.77■□□□□ 0.44
Ctdsp1-201ENSMUST00000027367 Gm5493S4R2D1 92 aa17.77■□□□□ 0.44
Ctdsp1-201ENSMUST00000027367 Prune2Q52KR3 3084 aa17.77■□□□□ 0.44
Ctdsp1-201ENSMUST00000027367 Gm42517A0A1Y7VLQ2 374 aa17.77■□□□□ 0.44
Ctdsp1-201ENSMUST00000027367 Nrsn1P97799 196 aa17.77■□□□□ 0.44
Ctdsp1-201ENSMUST00000027367 Col9a1Q05722 921 aa17.77■□□□□ 0.44
Ctdsp1-201ENSMUST00000027367 Fbxw20Q5U467 468 aa17.77■□□□□ 0.44
Ctdsp1-201ENSMUST00000027367 Olfr107Q7TRK4 309 aa17.77■□□□□ 0.44
Ctdsp1-201ENSMUST00000027367 Slc25a44Q8BGF9 314 aa17.77■□□□□ 0.44
Ctdsp1-201ENSMUST00000027367 Klk14Q8CGR5 250 aa17.77■□□□□ 0.44
Ctdsp1-201ENSMUST00000027367 Tmem216Q9CQC4 141 aa17.77■□□□□ 0.44
Ctdsp1-201ENSMUST00000027367 Fkbp8O35465 402 aa17.77■□□□□ 0.43
Ctdsp1-201ENSMUST00000027367 TcapO70548 167 aa17.77■□□□□ 0.43
Ctdsp1-201ENSMUST00000027367 Tmem211Q3UUA0 195 aa17.77■□□□□ 0.43
Ctdsp1-201ENSMUST00000027367 Vmn1r72Q8K3N7 306 aa17.77■□□□□ 0.43
Ctdsp1-201ENSMUST00000027367 Rtn4ip1Q924D0 396 aa17.77■□□□□ 0.43
Ctdsp1-201ENSMUST00000027367 MmachcQ9CZD0 279 aa17.77■□□□□ 0.43
Ctdsp1-201ENSMUST00000027367 Eif2s3xQ9Z0N1 472 aaKnown RBP17.77■□□□□ 0.43
Ctdsp1-201ENSMUST00000027367 Eif2s3yQ9Z0N2 472 aa17.77■□□□□ 0.43
Ctdsp1-201ENSMUST00000027367 Gm12355A2A4X6 163 aa17.76■□□□□ 0.43
Ctdsp1-201ENSMUST00000027367 Olfr1214A2ATG3 311 aa17.76■□□□□ 0.43
Ctdsp1-201ENSMUST00000027367 Zfp456B2RUK9 458 aa17.76■□□□□ 0.43
Ctdsp1-201ENSMUST00000027367 Vmn1r167G3UW71 315 aa17.76■□□□□ 0.43
Ctdsp1-201ENSMUST00000027367 Gpr33O88416 339 aa17.76■□□□□ 0.43
Ctdsp1-201ENSMUST00000027367 Il6P08505 211 aa17.76■□□□□ 0.43
Ctdsp1-201ENSMUST00000027367 Irf1P15314 329 aa17.76■□□□□ 0.43
Ctdsp1-201ENSMUST00000027367 Crisp2P16563 243 aa17.76■□□□□ 0.43
Ctdsp1-201ENSMUST00000027367 Srsf3P84104 164 aaKnown RBP17.76■□□□□ 0.43
Ctdsp1-201ENSMUST00000027367 Gpr55Q3UJF0 327 aa17.76■□□□□ 0.43
Ctdsp1-201ENSMUST00000027367 Sft2d1Q5SSN7 159 aa17.76■□□□□ 0.43
Ctdsp1-201ENSMUST00000027367 Tas2r120Q7M721 295 aa17.76■□□□□ 0.43
Ctdsp1-201ENSMUST00000027367 Slc22a20Q80UJ1 556 aa17.76■□□□□ 0.43
Ctdsp1-201ENSMUST00000027367 Cggbp1Q8BHG9 167 aaKnown RBP17.76■□□□□ 0.43
Ctdsp1-201ENSMUST00000027367 Rasgef1bQ8JZL7 473 aa17.76■□□□□ 0.43
Ctdsp1-201ENSMUST00000027367 Olfr993Q8VF75 314 aa17.76■□□□□ 0.43
Ctdsp1-201ENSMUST00000027367 Snx18Q91ZR2 614 aa17.76■□□□□ 0.43
Ctdsp1-201ENSMUST00000027367 AspdhQ9DCQ2 287 aa17.76■□□□□ 0.43
Ctdsp1-201ENSMUST00000027367 Actl6aQ9Z2N8 429 aaKnown RBP17.76■□□□□ 0.43
Ctdsp1-201ENSMUST00000027367 Cep295Q8BQ48 2412 aa17.76■□□□□ 0.43
Ctdsp1-201ENSMUST00000027367 Olfr1218L7MU54 311 aa17.76■□□□□ 0.43
Ctdsp1-201ENSMUST00000027367 Fabp9O08716 132 aa17.76■□□□□ 0.43
Ctdsp1-201ENSMUST00000027367 Rnase2bO35292 155 aa17.76■□□□□ 0.43
Ctdsp1-201ENSMUST00000027367 CfdP03953 259 aa17.76■□□□□ 0.43
Ctdsp1-201ENSMUST00000027367 Srsf6Q3TWW8 339 aaKnown RBP17.76■□□□□ 0.43
Retrieved 100 of 22,080 RNA–protein pairs in 29 ms