RNA–Protein interactions for RNA: ENSMUST00000027127.13

Sf3b1-201, Transcript of Splicing factor 3B subunit 1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Sf3b1, Length 6,195 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Sf3b1-201ENSMUST00000027127 Thoc3Q8VE80 351 aa7.54□□□□□ -1.2
Sf3b1-201ENSMUST00000027127 Olfr1388Q8VFA3 311 aa7.54□□□□□ -1.2
Sf3b1-201ENSMUST00000027127 Spsb1Q9D5L7 273 aa7.54□□□□□ -1.2
Sf3b1-201ENSMUST00000027127 Cts8Q9JI81 333 aa7.54□□□□□ -1.2
Sf3b1-201ENSMUST00000027127 Tbl1xQ9QXE7 527 aa7.54□□□□□ -1.2
Sf3b1-201ENSMUST00000027127 Tet2Q4JK59 1912 aaKnown RBP7.54□□□□□ -1.2
Sf3b1-201ENSMUST00000027127 Mesp2O08574 370 aa7.53□□□□□ -1.2
Sf3b1-201ENSMUST00000027127 Dhrs3O88876 302 aa7.53□□□□□ -1.2
Sf3b1-201ENSMUST00000027127 Ceacam19Q3TQ88 271 aa7.53□□□□□ -1.2
Sf3b1-201ENSMUST00000027127 Bbs12Q5SUD9 708 aa7.53□□□□□ -1.2
Sf3b1-201ENSMUST00000027127 Jagn1Q5XKN4 183 aa7.53□□□□□ -1.2
Sf3b1-201ENSMUST00000027127 Krt33bQ61897 404 aa7.53□□□□□ -1.2
Sf3b1-201ENSMUST00000027127 Vmn1r222Q8R269 308 aa7.53□□□□□ -1.2
Sf3b1-201ENSMUST00000027127 Olfr1217Q8VGG1 304 aa7.53□□□□□ -1.2
Sf3b1-201ENSMUST00000027127 Olfr790Q8VGJ3 322 aa7.53□□□□□ -1.2
Sf3b1-201ENSMUST00000027127 Arrdc1Q99KN1 434 aa7.53□□□□□ -1.2
Sf3b1-201ENSMUST00000027127 Hcfc1r1Q9CYQ5 120 aa7.53□□□□□ -1.2
Sf3b1-201ENSMUST00000027127 Tsc22d4Q9EQN3 387 aa7.53□□□□□ -1.2
Sf3b1-201ENSMUST00000027127 Six6Q9QZ28 246 aa7.53□□□□□ -1.2
Sf3b1-201ENSMUST00000027127 Olfr785A0A0N4SVC3 312 aa7.53□□□□□ -1.2
Sf3b1-201ENSMUST00000027127 C2cd6E9Q152 557 aa7.53□□□□□ -1.2
Sf3b1-201ENSMUST00000027127 Zfp760E9QAF5 666 aa7.53□□□□□ -1.2
Sf3b1-201ENSMUST00000027127 Zfp616J3QN14 987 aa7.53□□□□□ -1.2
Sf3b1-201ENSMUST00000027127 Tgfbr3O88393 850 aa7.53□□□□□ -1.2
Sf3b1-201ENSMUST00000027127 Il4P07750 140 aa7.53□□□□□ -1.2
Sf3b1-201ENSMUST00000027127 H1f0P10922 194 aaKnown RBP7.53□□□□□ -1.2
Sf3b1-201ENSMUST00000027127 NodalP43021 354 aa7.53□□□□□ -1.2
Sf3b1-201ENSMUST00000027127 Olfr5Q60889 312 aa7.53□□□□□ -1.2
Sf3b1-201ENSMUST00000027127 Lefty1Q64280 368 aa7.53□□□□□ -1.2
Sf3b1-201ENSMUST00000027127 Olfr578Q8VH17 313 aa7.53□□□□□ -1.2
Sf3b1-201ENSMUST00000027127 Rwdd3Q8VIL2 267 aa7.53□□□□□ -1.2
Sf3b1-201ENSMUST00000027127 Hsbp1Q9CQZ1 76 aa7.53□□□□□ -1.2
Sf3b1-201ENSMUST00000027127 Znf593Q9DB42 134 aaKnown RBP7.53□□□□□ -1.2
Sf3b1-201ENSMUST00000027127 Galnt16Q9JJ61 558 aa7.53□□□□□ -1.2
Sf3b1-201ENSMUST00000027127 Akip1Q9JJR5 212 aa7.53□□□□□ -1.2
Sf3b1-201ENSMUST00000027127 Insl6Q9QY05 191 aa7.53□□□□□ -1.2
Sf3b1-201ENSMUST00000027127 EdarQ9R187 448 aa7.53□□□□□ -1.2
Sf3b1-201ENSMUST00000027127 Mapk7Q9WVS8 806 aa7.53□□□□□ -1.2
Sf3b1-201ENSMUST00000027127 Vmn1r167G3UW71 315 aa7.53□□□□□ -1.2
Sf3b1-201ENSMUST00000027127 Gm2075J3QMW5 144 aa7.53□□□□□ -1.2
Sf3b1-201ENSMUST00000027127 Gm3633L7N233 213 aa7.53□□□□□ -1.2
Sf3b1-201ENSMUST00000027127 Gm9611L7N476 213 aa7.53□□□□□ -1.2
Sf3b1-201ENSMUST00000027127 Agr2O88312 175 aa7.53□□□□□ -1.2
Sf3b1-201ENSMUST00000027127 Rac3P60764 192 aa7.53□□□□□ -1.2
Sf3b1-201ENSMUST00000027127 LipnQ3U4B4 400 aa7.53□□□□□ -1.2
Sf3b1-201ENSMUST00000027127 Fbxo7Q3U7U3 523 aa7.53□□□□□ -1.2
Sf3b1-201ENSMUST00000027127 BB287469Q3UT53 144 aa7.53□□□□□ -1.2
Sf3b1-201ENSMUST00000027127 Prss43Q76HL1 382 aa7.53□□□□□ -1.2
Sf3b1-201ENSMUST00000027127 Stk35Q80ZW0 539 aa7.53□□□□□ -1.2
Sf3b1-201ENSMUST00000027127 Seh1lQ8R2U0 360 aa7.53□□□□□ -1.2
Sf3b1-201ENSMUST00000027127 Rbms1Q91W59 403 aaKnown RBP7.53□□□□□ -1.2
Sf3b1-201ENSMUST00000027127 Nudcd2Q9CQ48 157 aa7.53□□□□□ -1.2
Sf3b1-201ENSMUST00000027127 C1galt1c1Q9JMG2 316 aa7.53□□□□□ -1.2
Sf3b1-201ENSMUST00000027127 Hsf4Q9R0L1 492 aa7.53□□□□□ -1.2
Sf3b1-201ENSMUST00000027127 Plp2Q9R1Q7 152 aa7.53□□□□□ -1.2
Sf3b1-201ENSMUST00000027127 Ak3Q9WTP7 227 aa7.53□□□□□ -1.2
Sf3b1-201ENSMUST00000027127 Arl3Q9WUL7 182 aa7.53□□□□□ -1.2
Sf3b1-201ENSMUST00000027127 Gm6576F6YTZ4 274 aa7.53□□□□□ -1.2
Sf3b1-201ENSMUST00000027127 Gm21833J3QPK1 500 aa7.53□□□□□ -1.2
Sf3b1-201ENSMUST00000027127 BC117090L7N257 96 aa7.53□□□□□ -1.2
Sf3b1-201ENSMUST00000027127 Atf6bO35451 699 aa7.53□□□□□ -1.2
Sf3b1-201ENSMUST00000027127 P01638 115 aa7.53□□□□□ -1.2
Sf3b1-201ENSMUST00000027127 Atf1P81269 269 aaKnown RBP7.53□□□□□ -1.2
Sf3b1-201ENSMUST00000027127 Slc2a9Q3T9X0 538 aa7.53□□□□□ -1.2
Sf3b1-201ENSMUST00000027127 Znf511Q6P0X2 227 aa7.53□□□□□ -1.2
Sf3b1-201ENSMUST00000027127 Cdk3Q80YP0 303 aa7.53□□□□□ -1.2
Sf3b1-201ENSMUST00000027127 BmperQ8CJ69 685 aa7.53□□□□□ -1.2
Sf3b1-201ENSMUST00000027127 NosipQ9D6T0 301 aaKnown RBP7.53□□□□□ -1.2
Sf3b1-201ENSMUST00000027127 Tmem225Q9D9S2 230 aa7.53□□□□□ -1.2
Sf3b1-201ENSMUST00000027127 Gal3st1Q9JHE4 423 aa7.53□□□□□ -1.2
Sf3b1-201ENSMUST00000027127 Rad1Q9QWZ1 280 aa7.53□□□□□ -1.2
Sf3b1-201ENSMUST00000027127 Anxa10Q9QZ10 324 aa7.53□□□□□ -1.2
Sf3b1-201ENSMUST00000027127 Olfr110A2RT31 317 aa7.53□□□□□ -1.2
Sf3b1-201ENSMUST00000027127 Dpy19l1A6X919 746 aa7.53□□□□□ -1.2
Sf3b1-201ENSMUST00000027127 Gm572B1ARY8 399 aa7.53□□□□□ -1.2
Sf3b1-201ENSMUST00000027127 Olfr1410E9PYK6 323 aa7.53□□□□□ -1.2
Sf3b1-201ENSMUST00000027127 Vmn1r174E9PYW5 313 aa7.53□□□□□ -1.2
Sf3b1-201ENSMUST00000027127 Muc13P19467 573 aa7.53□□□□□ -1.2
Sf3b1-201ENSMUST00000027127 Rag2P21784 527 aa7.53□□□□□ -1.2
Sf3b1-201ENSMUST00000027127 Cldn18P56857 264 aa7.53□□□□□ -1.2
Sf3b1-201ENSMUST00000027127 Snai2P97469 269 aa7.53□□□□□ -1.2
Sf3b1-201ENSMUST00000027127 Ccdc106Q3ULM0 279 aa7.53□□□□□ -1.2
Sf3b1-201ENSMUST00000027127 Rpl35Q6ZWV7 123 aaKnown RBP7.53□□□□□ -1.2
Sf3b1-201ENSMUST00000027127 Olfr111Q7TRK1 317 aa7.53□□□□□ -1.2
Sf3b1-201ENSMUST00000027127 Pqlc2Q8C4N4 293 aa7.53□□□□□ -1.2
Sf3b1-201ENSMUST00000027127 Chrnb4Q8R493 495 aa7.53□□□□□ -1.2
Sf3b1-201ENSMUST00000027127 St3gal6Q8VIB3 329 aa7.53□□□□□ -1.2
Sf3b1-201ENSMUST00000027127 Snu13Q9D0T1 128 aaKnown RBP7.53□□□□□ -1.2
Sf3b1-201ENSMUST00000027127 Riox1Q9JJF3 603 aa7.53□□□□□ -1.2
Sf3b1-201ENSMUST00000027127 Mmp17Q9R0S3 578 aa7.53□□□□□ -1.2
Sf3b1-201ENSMUST00000027127 Cx3cr1Q9Z0D9 354 aa7.53□□□□□ -1.2
Sf3b1-201ENSMUST00000027127 Olfr721-ps1A0A140T8T9 324 aa7.52□□□□□ -1.2
Sf3b1-201ENSMUST00000027127 Gm14444A2ARW3 426 aa7.52□□□□□ -1.2
Sf3b1-201ENSMUST00000027127 Slc18b1D3Z5L6 459 aa7.52□□□□□ -1.2
Sf3b1-201ENSMUST00000027127 AF067061O70616 171 aa7.52□□□□□ -1.2
Sf3b1-201ENSMUST00000027127 Sod1P08228 154 aaKnown RBP7.52□□□□□ -1.2
Sf3b1-201ENSMUST00000027127 UcnP81615 122 aa7.52□□□□□ -1.2
Sf3b1-201ENSMUST00000027127 Olfr1106Q7TR57 312 aa7.52□□□□□ -1.2
Sf3b1-201ENSMUST00000027127 Olfr205Q7TS37 305 aa7.52□□□□□ -1.2
Sf3b1-201ENSMUST00000027127 Znf574Q8BY46 900 aa7.52□□□□□ -1.2
Retrieved 100 of 22,080 RNA–protein pairs in 29.6 ms