RNA–Protein interactions for RNA: ENSMUST00000022220.12

Msh3-201, Transcript of DNA mismatch repair protein Msh3, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Msh3, Length 3,937 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Msh3-201ENSMUST00000022220 Rbmxl1Q91VM5 388 aaKnown RBP9.71□□□□□ -0.86
Msh3-201ENSMUST00000022220 IcaQ9DBD0 700 aa9.71□□□□□ -0.86
Msh3-201ENSMUST00000022220 Ccdc9bA3KGF9 545 aa9.7□□□□□ -0.86
Msh3-201ENSMUST00000022220 Gm4177D3YTX5 305 aa9.7□□□□□ -0.86
Msh3-201ENSMUST00000022220 BC048679D3YXE9 172 aa9.7□□□□□ -0.86
Msh3-201ENSMUST00000022220 Gm21863J3KMP8 111 aa9.7□□□□□ -0.86
Msh3-201ENSMUST00000022220 Vmn1r127K7N6J5 305 aa9.7□□□□□ -0.86
Msh3-201ENSMUST00000022220 Vmn1r142K7N6U0 305 aa9.7□□□□□ -0.86
Msh3-201ENSMUST00000022220 Vmn1r159K7N701 305 aa9.7□□□□□ -0.86
Msh3-201ENSMUST00000022220 Vmn1r122K7N726 305 aa9.7□□□□□ -0.86
Msh3-201ENSMUST00000022220 Tgfbr3O88393 850 aa9.7□□□□□ -0.86
Msh3-201ENSMUST00000022220 Igf2P09535 180 aa9.7□□□□□ -0.86
Msh3-201ENSMUST00000022220 Il5raP21183 415 aa9.7□□□□□ -0.86
Msh3-201ENSMUST00000022220 NodalP43021 354 aa9.7□□□□□ -0.86
Msh3-201ENSMUST00000022220 Defa-rs12P50716 91 aa9.7□□□□□ -0.86
Msh3-201ENSMUST00000022220 Lbx1P52955 282 aa9.7□□□□□ -0.86
Msh3-201ENSMUST00000022220 AbraclQ4KML4 81 aa9.7□□□□□ -0.86
Msh3-201ENSMUST00000022220 Foxs1Q61574 329 aa9.7□□□□□ -0.86
Msh3-201ENSMUST00000022220 Bud31Q6PGH1 103 aa9.7□□□□□ -0.86
Msh3-201ENSMUST00000022220 Tacstd2Q8BGV3 317 aa9.7□□□□□ -0.86
Msh3-201ENSMUST00000022220 Slc35e4Q8K3D6 351 aa9.7□□□□□ -0.86
Msh3-201ENSMUST00000022220 Olfr970Q8VFN3 311 aa9.7□□□□□ -0.86
Msh3-201ENSMUST00000022220 PccbQ99MN9 541 aa9.7□□□□□ -0.86
Msh3-201ENSMUST00000022220 Q9CWB7 115 aa9.7□□□□□ -0.86
Msh3-201ENSMUST00000022220 Mcts1Q9DB27 181 aa9.7□□□□□ -0.86
Msh3-201ENSMUST00000022220 Ppp1r17Q9Z2E4 159 aa9.7□□□□□ -0.86
Msh3-201ENSMUST00000022220 MpdzQ8VBX6 2055 aa9.7□□□□□ -0.86
Msh3-201ENSMUST00000022220 PrnA0A075B668 197 aa9.7□□□□□ -0.86
Msh3-201ENSMUST00000022220 A0A286YCQ8 80 aa9.7□□□□□ -0.86
Msh3-201ENSMUST00000022220 Ube2ql1A0PJN4 161 aa9.7□□□□□ -0.86
Msh3-201ENSMUST00000022220 Gm14692A2BH01 229 aa9.7□□□□□ -0.86
Msh3-201ENSMUST00000022220 Prrt1O35449 306 aa9.7□□□□□ -0.86
Msh3-201ENSMUST00000022220 Wisp1O54775 367 aa9.7□□□□□ -0.86
Msh3-201ENSMUST00000022220 PomcP01193 235 aa9.7□□□□□ -0.86
Msh3-201ENSMUST00000022220 Zfp13P10754 512 aa9.7□□□□□ -0.86
Msh3-201ENSMUST00000022220 GusbP12265 648 aa9.7□□□□□ -0.86
Msh3-201ENSMUST00000022220 StomP54116 284 aa9.7□□□□□ -0.86
Msh3-201ENSMUST00000022220 NfybP63139 207 aa9.7□□□□□ -0.86
Msh3-201ENSMUST00000022220 Nufip2Q5F2E7 692 aaKnown RBP9.7□□□□□ -0.86
Msh3-201ENSMUST00000022220 Epha5Q60629 876 aa9.7□□□□□ -0.86
Msh3-201ENSMUST00000022220 SrmQ64674 302 aa9.7□□□□□ -0.86
Msh3-201ENSMUST00000022220 Dzank1Q8C008 778 aa9.7□□□□□ -0.86
Msh3-201ENSMUST00000022220 Wdr77Q99J09 342 aa9.7□□□□□ -0.86
Msh3-201ENSMUST00000022220 Q9CRW3 126 aa9.7□□□□□ -0.86
Msh3-201ENSMUST00000022220 Trappc6bQ9D289 158 aa9.7□□□□□ -0.86
Msh3-201ENSMUST00000022220 Abhd5Q9DBL9 351 aa9.7□□□□□ -0.86
Msh3-201ENSMUST00000022220 Mmp1aQ9EPL5 464 aa9.7□□□□□ -0.86
Msh3-201ENSMUST00000022220 Zc3h8Q9JJ48 305 aaKnown RBP9.7□□□□□ -0.86
Msh3-201ENSMUST00000022220 Stard10Q9JMD3 291 aa9.7□□□□□ -0.86
Msh3-201ENSMUST00000022220 Ighv1-78A0A0G2JGN3 117 aa9.7□□□□□ -0.86
Msh3-201ENSMUST00000022220 Prr23a1G3UW32 258 aa9.7□□□□□ -0.86
Msh3-201ENSMUST00000022220 A630023A22RikJ3QP60 199 aa9.7□□□□□ -0.86
Msh3-201ENSMUST00000022220 Rasl12Q08AT1 266 aa9.7□□□□□ -0.86
Msh3-201ENSMUST00000022220 Rep15Q9D7T1 230 aa9.7□□□□□ -0.86
Msh3-201ENSMUST00000022220 Emc9Q9DB76 206 aa9.7□□□□□ -0.86
Msh3-201ENSMUST00000022220 Galnt16Q9JJ61 558 aa9.7□□□□□ -0.86
Msh3-201ENSMUST00000022220 Eif2s3xQ9Z0N1 472 aaKnown RBP9.7□□□□□ -0.86
Msh3-201ENSMUST00000022220 Eif2s3yQ9Z0N2 472 aa9.7□□□□□ -0.86
Msh3-201ENSMUST00000022220 Vamp5Q9Z2P8 102 aa9.7□□□□□ -0.86
Msh3-201ENSMUST00000022220 Lrp3E9Q1T6 790 aa9.69□□□□□ -0.86
Msh3-201ENSMUST00000022220 Ube2nP61089 152 aaKnown RBP9.69□□□□□ -0.86
Msh3-201ENSMUST00000022220 Gm1673Q3UR78 90 aa9.69□□□□□ -0.86
Msh3-201ENSMUST00000022220 Ankrd53Q3V0J4 497 aa9.69□□□□□ -0.86
Msh3-201ENSMUST00000022220 Psg26Q4KL65 475 aa9.69□□□□□ -0.86
Msh3-201ENSMUST00000022220 Arg1Q61176 323 aa9.69□□□□□ -0.86
Msh3-201ENSMUST00000022220 Taf9bQ6NZA9 249 aa9.69□□□□□ -0.86
Msh3-201ENSMUST00000022220 Impad1Q80V26 356 aa9.69□□□□□ -0.86
Msh3-201ENSMUST00000022220 TxnipQ8BG60 397 aa9.69□□□□□ -0.86
Msh3-201ENSMUST00000022220 C730034F03RikQ8BGL5 111 aa9.69□□□□□ -0.86
Msh3-201ENSMUST00000022220 Nob1Q8BW10 403 aa9.69□□□□□ -0.86
Msh3-201ENSMUST00000022220 1810024B03RikQ8BWE1 200 aa9.69□□□□□ -0.86
Msh3-201ENSMUST00000022220 Nhlrc2Q8BZW8 725 aa9.69□□□□□ -0.86
Msh3-201ENSMUST00000022220 Tmem198bQ8CFU0 350 aa9.69□□□□□ -0.86
Msh3-201ENSMUST00000022220 Syngr3Q8R191 229 aa9.69□□□□□ -0.86
Msh3-201ENSMUST00000022220 Fbxo36Q9CQ24 188 aa9.69□□□□□ -0.86
Msh3-201ENSMUST00000022220 SelenofQ9ERR7 162 aa9.69□□□□□ -0.86
Msh3-201ENSMUST00000022220 Reep6Q9JM62 201 aa9.69□□□□□ -0.86
Msh3-201ENSMUST00000022220 Prob1A0A087WR45 1010 aa9.69□□□□□ -0.86
Msh3-201ENSMUST00000022220 Lsm5P62322 91 aa9.69□□□□□ -0.86
Msh3-201ENSMUST00000022220 Bcl2l15Q08ED0 167 aa9.69□□□□□ -0.86
Msh3-201ENSMUST00000022220 McidasQ3UZ45 379 aa9.69□□□□□ -0.86
Msh3-201ENSMUST00000022220 Cdadc1Q8BMD5 523 aa9.69□□□□□ -0.86
Msh3-201ENSMUST00000022220 Arf2Q8BSL7 181 aa9.69□□□□□ -0.86
Msh3-201ENSMUST00000022220 Hbq1aQ8BYM1 145 aa9.69□□□□□ -0.86
Msh3-201ENSMUST00000022220 Galnt6Q8C7U7 622 aa9.69□□□□□ -0.86
Msh3-201ENSMUST00000022220 ShfQ8CG80 238 aa9.69□□□□□ -0.86
Msh3-201ENSMUST00000022220 Chrnb4Q8R493 495 aa9.69□□□□□ -0.86
Msh3-201ENSMUST00000022220 Abhd14bQ8VCR7 210 aa9.69□□□□□ -0.86
Msh3-201ENSMUST00000022220 Olfr828Q8VFM8 312 aa9.69□□□□□ -0.86
Msh3-201ENSMUST00000022220 Abhd3Q91ZH7 411 aa9.69□□□□□ -0.86
Msh3-201ENSMUST00000022220 CsprsQ99388 208 aa9.69□□□□□ -0.86
Msh3-201ENSMUST00000022220 2210010C04RikQ9CPN9 247 aaKnown RBP9.69□□□□□ -0.86
Msh3-201ENSMUST00000022220 Atp5sQ9CRA7 200 aa9.69□□□□□ -0.86
Msh3-201ENSMUST00000022220 Eef1akmt1Q9CY45 214 aa9.69□□□□□ -0.86
Msh3-201ENSMUST00000022220 CsQ9CZU6 464 aaKnown RBP9.69□□□□□ -0.86
Msh3-201ENSMUST00000022220 Samd8Q9DA37 478 aa9.69□□□□□ -0.86
Msh3-201ENSMUST00000022220 2410004P03RikA0A087WQY2 205 aa9.69□□□□□ -0.86
Msh3-201ENSMUST00000022220 Fndc7A2AED3 737 aa9.69□□□□□ -0.86
Msh3-201ENSMUST00000022220 Olfr1066A2AK62 313 aa9.69□□□□□ -0.86
Msh3-201ENSMUST00000022220 Birc7A2AWP0 285 aa9.69□□□□□ -0.86
Retrieved 100 of 22,080 RNA–protein pairs in 45.3 ms