RNA–Protein interactions for RNA: ENST00000642137.1

LINC00339-213, long intergenic non-protein coding RNA 339, humanhuman

BASIC

Gene LINC00339, Length 222 nt, Biotype transcribed processed pseudogene, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00339-213ENST00000642137 FAM90A12PA8MX19 464 aa10.3□□□□□ -0.76
LINC00339-213ENST00000642137 FAM90A5PA8MXJ8 464 aa10.3□□□□□ -0.76
LINC00339-213ENST00000642137 FAM90A23PA8MXZ1 464 aa10.3□□□□□ -0.76
LINC00339-213ENST00000642137 H3BUI4 141 aa10.3□□□□□ -0.76
LINC00339-213ENST00000642137 CHRM2P08172 466 aa10.3□□□□□ -0.76
LINC00339-213ENST00000642137 FAM90A15PP0C7V4 464 aa10.3□□□□□ -0.76
LINC00339-213ENST00000642137 FAM90A13PP0C7W8 464 aa10.3□□□□□ -0.76
LINC00339-213ENST00000642137 FAM90A14PP0C7W9 464 aa10.3□□□□□ -0.76
LINC00339-213ENST00000642137 FAM90A24PP0C7X0 464 aa10.3□□□□□ -0.76
LINC00339-213ENST00000642137 SLC25A16P16260 332 aa10.3□□□□□ -0.76
LINC00339-213ENST00000642137 LMO1P25800 156 aa10.3□□□□□ -0.76
LINC00339-213ENST00000642137 PRDX2P32119 198 aa10.3□□□□□ -0.76
LINC00339-213ENST00000642137 RBM11P57052 281 aaKnown RBP10.3□□□□□ -0.76
LINC00339-213ENST00000642137 RPS27AP62979 156 aaKnown RBP10.3□□□□□ -0.76
LINC00339-213ENST00000642137 MPV17LQ2QL34 196 aa10.3□□□□□ -0.76
LINC00339-213ENST00000642137 AVPI1Q5T686 147 aa10.3□□□□□ -0.76
LINC00339-213ENST00000642137 STUMQ69YW2 141 aa10.3□□□□□ -0.76
LINC00339-213ENST00000642137 Q6P435 159 aa10.3□□□□□ -0.76
LINC00339-213ENST00000642137 DCDC5Q6ZRR9 648 aa10.3□□□□□ -0.76
LINC00339-213ENST00000642137 FAM89BQ8N5H3 189 aa10.3□□□□□ -0.76
LINC00339-213ENST00000642137 OR5T2Q8NGG2 359 aa10.3□□□□□ -0.76
LINC00339-213ENST00000642137 OR5H6Q8NGV6 325 aa10.3□□□□□ -0.76
LINC00339-213ENST00000642137 FAM46BQ96A09 425 aa10.3□□□□□ -0.76
LINC00339-213ENST00000642137 Q96M66 194 aa10.3□□□□□ -0.76
LINC00339-213ENST00000642137 TMEM246Q9BRR3 403 aa10.3□□□□□ -0.76
LINC00339-213ENST00000642137 TMEM59Q9BXS4 323 aa10.3□□□□□ -0.76
LINC00339-213ENST00000642137 SELENOIQ9C0D9 397 aa10.3□□□□□ -0.76
LINC00339-213ENST00000642137 SLIRPQ9GZT3 109 aaKnown RBP10.3□□□□□ -0.76
LINC00339-213ENST00000642137 NXF2Q9GZY0 626 aaKnown RBP10.3□□□□□ -0.76
LINC00339-213ENST00000642137 LPAR5Q9H1C0 372 aa10.3□□□□□ -0.76
LINC00339-213ENST00000642137 KCNK15Q9H427 330 aa10.3□□□□□ -0.76
LINC00339-213ENST00000642137 KAAG1Q9UBP8 84 aa10.3□□□□□ -0.76
LINC00339-213ENST00000642137 A3GALT2U3KPV4 340 aa10.3□□□□□ -0.76
LINC00339-213ENST00000642137 FBN2P35556 2912 aa10.3□□□□□ -0.76
LINC00339-213ENST00000642137 IGKV1D-17A0A075B6S4 117 aa10.29□□□□□ -0.76
LINC00339-213ENST00000642137 METTL21EPA6NDL7 271 aa10.29□□□□□ -0.76
LINC00339-213ENST00000642137 DEGS1O15121 323 aa10.29□□□□□ -0.76
LINC00339-213ENST00000642137 GYPAP02724 150 aa10.29□□□□□ -0.76
LINC00339-213ENST00000642137 AMY2BP19961 511 aa10.29□□□□□ -0.76
LINC00339-213ENST00000642137 NR4A2P43354 598 aa10.29□□□□□ -0.76
LINC00339-213ENST00000642137 ART1P52961 327 aa10.29□□□□□ -0.76
LINC00339-213ENST00000642137 PIGYQ3MUY2 71 aa10.29□□□□□ -0.76
LINC00339-213ENST00000642137 Q5PR19 223 aa10.29□□□□□ -0.76
LINC00339-213ENST00000642137 ZNF788Q6ZQV5 615 aa10.29□□□□□ -0.76
LINC00339-213ENST00000642137 SLC36A1Q7Z2H8 476 aa10.29□□□□□ -0.76
LINC00339-213ENST00000642137 SPICQ8N5J4 248 aa10.29□□□□□ -0.76
LINC00339-213ENST00000642137 LGALS14Q8TCE9 139 aa10.29□□□□□ -0.76
LINC00339-213ENST00000642137 SDSLQ96GA7 329 aa10.29□□□□□ -0.76
LINC00339-213ENST00000642137 MED30Q96HR3 178 aa10.29□□□□□ -0.76
LINC00339-213ENST00000642137 DCUN1D5Q9BTE7 237 aa10.29□□□□□ -0.76
LINC00339-213ENST00000642137 BPESC1Q9GZL8 116 aa10.29□□□□□ -0.76
LINC00339-213ENST00000642137 ABCG5Q9H222 651 aa10.29□□□□□ -0.76
LINC00339-213ENST00000642137 MMP27Q9H306 513 aa10.29□□□□□ -0.76
LINC00339-213ENST00000642137 ZNF665Q9H7R5 613 aa10.29□□□□□ -0.76
LINC00339-213ENST00000642137 IFT22Q9H7X7 185 aa10.29□□□□□ -0.76
LINC00339-213ENST00000642137 IL36RNQ9UBH0 155 aa10.29□□□□□ -0.76
LINC00339-213ENST00000642137 COMMD3Q9UBI1 195 aa10.29□□□□□ -0.76
LINC00339-213ENST00000642137 MIOXQ9UGB7 285 aa10.29□□□□□ -0.76
LINC00339-213ENST00000642137 OR14J1Q9UGF5 321 aa10.29□□□□□ -0.76
LINC00339-213ENST00000642137 ZNF222Q9UK12 451 aa10.29□□□□□ -0.76
LINC00339-213ENST00000642137 IGHV4-30-2A0A087WSY4 118 aa10.28□□□□□ -0.76
LINC00339-213ENST00000642137 ISPDA4D126 451 aa10.28□□□□□ -0.76
LINC00339-213ENST00000642137 GEMIN2O14893 280 aaKnown RBP10.28□□□□□ -0.76
LINC00339-213ENST00000642137 OR2H2O95918 312 aa10.28□□□□□ -0.76
LINC00339-213ENST00000642137 HAND1O96004 215 aa10.28□□□□□ -0.76
LINC00339-213ENST00000642137 DUSP1P28562 367 aa10.28□□□□□ -0.76
LINC00339-213ENST00000642137 GABRA2P47869 451 aa10.28□□□□□ -0.76
LINC00339-213ENST00000642137 PITPNBP48739 271 aa10.28□□□□□ -0.76
LINC00339-213ENST00000642137 EFNB2P52799 333 aa10.28□□□□□ -0.76
LINC00339-213ENST00000642137 SNU13P55769 128 aaKnown RBP10.28□□□□□ -0.76
LINC00339-213ENST00000642137 PLA2G7Q13093 441 aa10.28□□□□□ -0.76
LINC00339-213ENST00000642137 PDCD1Q15116 288 aa10.28□□□□□ -0.76
LINC00339-213ENST00000642137 TAF9Q16594 264 aa10.28□□□□□ -0.76
LINC00339-213ENST00000642137 CNPY1Q3B7I2 92 aa10.28□□□□□ -0.76
LINC00339-213ENST00000642137 KRTAP1-3Q8IUG1 177 aa10.28□□□□□ -0.76
LINC00339-213ENST00000642137 ZNF561Q8N587 486 aa10.28□□□□□ -0.76
LINC00339-213ENST00000642137 CD177Q8N6Q3 437 aa10.28□□□□□ -0.76
LINC00339-213ENST00000642137 CHST4Q8NCG5 386 aa10.28□□□□□ -0.76
LINC00339-213ENST00000642137 MCFD2Q8NI22 146 aa10.28□□□□□ -0.76
LINC00339-213ENST00000642137 RAB40AQ8WXH6 277 aa10.28□□□□□ -0.76
LINC00339-213ENST00000642137 SNX22Q96L94 193 aa10.28□□□□□ -0.76
LINC00339-213ENST00000642137 CCL13Q99616 98 aa10.28□□□□□ -0.76
LINC00339-213ENST00000642137 PATZ1Q9HBE1 687 aaKnown RBP10.28□□□□□ -0.76
LINC00339-213ENST00000642137 PCDHB10Q9UN67 800 aa10.28□□□□□ -0.76
LINC00339-213ENST00000642137 MAB21L2Q9Y586 359 aa10.28□□□□□ -0.76
LINC00339-213ENST00000642137 A0A0A6YYH2 397 aa10.27□□□□□ -0.77
LINC00339-213ENST00000642137 NKX6-3A6NJ46 265 aa10.27□□□□□ -0.77
LINC00339-213ENST00000642137 A6NJ64 397 aa10.27□□□□□ -0.77
LINC00339-213ENST00000642137 CEACAM18A8MTB9 384 aa10.27□□□□□ -0.77
LINC00339-213ENST00000642137 SIGLEC5O15389 551 aa10.27□□□□□ -0.77
LINC00339-213ENST00000642137 ADAM20O43506 726 aa10.27□□□□□ -0.77
LINC00339-213ENST00000642137 SCGNO76038 276 aa10.27□□□□□ -0.77
LINC00339-213ENST00000642137 APOA1P02647 267 aa10.27□□□□□ -0.77
LINC00339-213ENST00000642137 GLAP06280 429 aa10.27□□□□□ -0.77
LINC00339-213ENST00000642137 WNT2P09544 360 aa10.27□□□□□ -0.77
LINC00339-213ENST00000642137 ZNF44P15621 663 aa10.27□□□□□ -0.77
LINC00339-213ENST00000642137 FUT3P21217 361 aa10.27□□□□□ -0.77
LINC00339-213ENST00000642137 GABRR1P24046 479 aa10.27□□□□□ -0.77
LINC00339-213ENST00000642137 VEGFCP49767 419 aa10.27□□□□□ -0.77
LINC00339-213ENST00000642137 COL10A1Q03692 680 aa10.27□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms