RNA–Protein interactions for RNA: ENST00000641939.1

PHGDH-231, Transcript of phosphoglycerate dehydrogenase, human

Gene PHGDH, Length 540 nt, Biotype processed transcript, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PHGDH-231	ENST00000641939	RPS4Y2	Q8TD47	263 aa		12.31	□□□□□ -0.44
PHGDH-231	ENST00000641939	GPR148	Q8TDV2	347 aa		12.31	□□□□□ -0.44
PHGDH-231	ENST00000641939	FBLIM1	Q8WUP2	373 aa		12.31	□□□□□ -0.44
PHGDH-231	ENST00000641939	SSMEM1	Q8WWF3	244 aa		12.31	□□□□□ -0.44
PHGDH-231	ENST00000641939	RGP1	Q92546	391 aa	Predicted RBP	12.31	□□□□□ -0.44
PHGDH-231	ENST00000641939	SNX22	Q96L94	193 aa		12.31	□□□□□ -0.44
PHGDH-231	ENST00000641939	BABAM2	Q9NXR7	383 aa		12.31	□□□□□ -0.44
PHGDH-231	ENST00000641939	CNOT2	Q9NZN8	540 aa	Known RBP	12.31	□□□□□ -0.44
PHGDH-231	ENST00000641939	IL36RN	Q9UBH0	155 aa		12.31	□□□□□ -0.44
PHGDH-231	ENST00000641939	CLEC2D	Q9UHP7	191 aa		12.31	□□□□□ -0.44
PHGDH-231	ENST00000641939	POMT1	Q9Y6A1	747 aa		12.31	□□□□□ -0.44
PHGDH-231	ENST00000641939		A0A1W2PRD5	423 aa		12.3	□□□□□ -0.44
PHGDH-231	ENST00000641939		A0A1W2PRF3	423 aa		12.3	□□□□□ -0.44
PHGDH-231	ENST00000641939		A0A1W2PRM7	423 aa		12.3	□□□□□ -0.44
PHGDH-231	ENST00000641939	OGG1	O15527	345 aa		12.3	□□□□□ -0.44
PHGDH-231	ENST00000641939	ANGPTL7	O43827	346 aa		12.3	□□□□□ -0.44
PHGDH-231	ENST00000641939	KDM4B	O94953	1096 aa		12.3	□□□□□ -0.44
PHGDH-231	ENST00000641939	CD2	P06729	351 aa		12.3	□□□□□ -0.44
PHGDH-231	ENST00000641939	CFP	P27918	469 aa		12.3	□□□□□ -0.44
PHGDH-231	ENST00000641939	ZNF146	Q15072	292 aa		12.3	□□□□□ -0.44
PHGDH-231	ENST00000641939	KISS1	Q15726	138 aa		12.3	□□□□□ -0.44
PHGDH-231	ENST00000641939	SPIN3	Q5JUX0	258 aa		12.3	□□□□□ -0.44
PHGDH-231	ENST00000641939	LAIR2	Q6ISS4	152 aa		12.3	□□□□□ -0.44
PHGDH-231	ENST00000641939	LDLRAD3	Q86YD5	345 aa		12.3	□□□□□ -0.44
PHGDH-231	ENST00000641939	SAXO1	Q8IYX7	474 aa		12.3	□□□□□ -0.44
PHGDH-231	ENST00000641939	C3orf56	Q8N813	242 aa		12.3	□□□□□ -0.44
PHGDH-231	ENST00000641939	OR5D18	Q8NGL1	313 aa		12.3	□□□□□ -0.44
PHGDH-231	ENST00000641939	OR52N1	Q8NH53	320 aa		12.3	□□□□□ -0.44
PHGDH-231	ENST00000641939	TFAP2C	Q92754	450 aa		12.3	□□□□□ -0.44
PHGDH-231	ENST00000641939	SMIM19	Q96E16	107 aa		12.3	□□□□□ -0.44
PHGDH-231	ENST00000641939	RHOF	Q9HBH0	211 aa		12.3	□□□□□ -0.44
PHGDH-231	ENST00000641939	HMG20A	Q9NP66	347 aa		12.3	□□□□□ -0.44
PHGDH-231	ENST00000641939	TNFRSF19	Q9NS68	423 aa		12.3	□□□□□ -0.44
PHGDH-231	ENST00000641939	PLCXD1	Q9NUJ7	323 aa		12.3	□□□□□ -0.44
PHGDH-231	ENST00000641939	GLS2	Q9UI32	602 aa		12.3	□□□□□ -0.44
PHGDH-231	ENST00000641939	SF3B6	Q9Y3B4	125 aa	Known RBP	12.3	□□□□□ -0.44
PHGDH-231	ENST00000641939	IGKV1-12	A0A0C4DH73	117 aa		12.29	□□□□□ -0.44
PHGDH-231	ENST00000641939	hCG_1809904	A0A1W2PP81	198 aa		12.29	□□□□□ -0.44
PHGDH-231	ENST00000641939		A0A1W2PPE2	198 aa		12.29	□□□□□ -0.44
PHGDH-231	ENST00000641939		A0A1W2PR64	198 aa		12.29	□□□□□ -0.44
PHGDH-231	ENST00000641939		A0A1W2PRV1	198 aa		12.29	□□□□□ -0.44
PHGDH-231	ENST00000641939	TMEM82	A0PJX8	343 aa		12.29	□□□□□ -0.44
PHGDH-231	ENST00000641939	MEIOC	A2RUB1	952 aa		12.29	□□□□□ -0.44
PHGDH-231	ENST00000641939	MAGEB3	O15480	346 aa		12.29	□□□□□ -0.44
PHGDH-231	ENST00000641939	XPNPEP2	O43895	674 aa		12.29	□□□□□ -0.44
PHGDH-231	ENST00000641939	LALBA	P00709	142 aa		12.29	□□□□□ -0.44
PHGDH-231	ENST00000641939	IGKV1D-12	P01611	117 aa		12.29	□□□□□ -0.44
PHGDH-231	ENST00000641939	FBP1	P09467	338 aa		12.29	□□□□□ -0.44
PHGDH-231	ENST00000641939	CALCB	P10092	127 aa		12.29	□□□□□ -0.44
PHGDH-231	ENST00000641939	RAB3A	P20336	220 aa		12.29	□□□□□ -0.44
PHGDH-231	ENST00000641939	DUSP1	P28562	367 aa		12.29	□□□□□ -0.44
PHGDH-231	ENST00000641939	SOX2	P48431	317 aa		12.29	□□□□□ -0.44
PHGDH-231	ENST00000641939	SNU13	P55769	128 aa	Known RBP	12.29	□□□□□ -0.44
PHGDH-231	ENST00000641939	EDDM3B	P56851	147 aa		12.29	□□□□□ -0.44
PHGDH-231	ENST00000641939	ACSM1	Q08AH1	577 aa		12.29	□□□□□ -0.44
PHGDH-231	ENST00000641939	ZNF273	Q14593	569 aa		12.29	□□□□□ -0.44
PHGDH-231	ENST00000641939	HCP5	Q6MZN7	132 aa		12.29	□□□□□ -0.44
PHGDH-231	ENST00000641939	ZNF529	Q6P280	563 aa		12.29	□□□□□ -0.44
PHGDH-231	ENST00000641939	CRIP3	Q6Q6R5	217 aa		12.29	□□□□□ -0.44
PHGDH-231	ENST00000641939	C17orf107	Q6ZR85	190 aa		12.29	□□□□□ -0.44
PHGDH-231	ENST00000641939	GDPD3	Q7L5L3	318 aa		12.29	□□□□□ -0.44
PHGDH-231	ENST00000641939	PNKD	Q8N490	385 aa		12.29	□□□□□ -0.44
PHGDH-231	ENST00000641939	ZSCAN4	Q8NAM6	433 aa	Predicted RBP	12.29	□□□□□ -0.44
PHGDH-231	ENST00000641939	CPNE2	Q96FN4	548 aa	Predicted RBP	12.29	□□□□□ -0.44
PHGDH-231	ENST00000641939	CHIA	Q9BZP6	476 aa		12.29	□□□□□ -0.44
PHGDH-231	ENST00000641939	HEXA-AS1	Q9H8Q6	139 aa		12.29	□□□□□ -0.44
PHGDH-231	ENST00000641939	PSORS1C1	Q9UIG5	152 aa		12.29	□□□□□ -0.44
PHGDH-231	ENST00000641939	ZNF281	Q9Y2X9	895 aa		12.29	□□□□□ -0.44
PHGDH-231	ENST00000641939	SIRT4	Q9Y6E7	314 aa	Predicted RBP	12.29	□□□□□ -0.44
PHGDH-231	ENST00000641939	SH2D1B	O14796	132 aa		12.28	□□□□□ -0.44
PHGDH-231	ENST00000641939	CCL3L1	P16619	93 aa		12.28	□□□□□ -0.44
PHGDH-231	ENST00000641939	GABRR1	P24046	479 aa		12.28	□□□□□ -0.44
PHGDH-231	ENST00000641939	SAA4	P35542	130 aa		12.28	□□□□□ -0.44
PHGDH-231	ENST00000641939	IER3	P46695	156 aa		12.28	□□□□□ -0.44
PHGDH-231	ENST00000641939	ZP1	P60852	638 aa		12.28	□□□□□ -0.44
PHGDH-231	ENST00000641939	GRK1	Q15835	563 aa		12.28	□□□□□ -0.44
PHGDH-231	ENST00000641939	STX19	Q8N4C7	294 aa		12.28	□□□□□ -0.44
PHGDH-231	ENST00000641939	C11orf42	Q8N5U0	333 aa		12.28	□□□□□ -0.44
PHGDH-231	ENST00000641939	ZNF485	Q8NCK3	441 aa		12.28	□□□□□ -0.44
PHGDH-231	ENST00000641939	BPIFB6	Q8NFQ5	453 aa		12.28	□□□□□ -0.44
PHGDH-231	ENST00000641939	OR52N4	Q8NGI2	321 aa		12.28	□□□□□ -0.44
PHGDH-231	ENST00000641939	TMEM106A	Q96A25	262 aa		12.28	□□□□□ -0.44
PHGDH-231	ENST00000641939	DPAGT1	Q9H3H5	408 aa		12.28	□□□□□ -0.44
PHGDH-231	ENST00000641939	TAS2R4	Q9NYW5	299 aa		12.28	□□□□□ -0.44
PHGDH-231	ENST00000641939	GSTK1	Q9Y2Q3	226 aa		12.28	□□□□□ -0.44
PHGDH-231	ENST00000641939	PCDHGB5	Q9Y5G0	923 aa		12.28	□□□□□ -0.44
PHGDH-231	ENST00000641939	FAM181B	A6NEQ2	426 aa		12.27	□□□□□ -0.45
PHGDH-231	ENST00000641939	ERICH4	A6NGS2	130 aa		12.27	□□□□□ -0.45
PHGDH-231	ENST00000641939		H0YJX3	145 aa		12.27	□□□□□ -0.45
PHGDH-231	ENST00000641939	PSPN	O60542	156 aa		12.27	□□□□□ -0.45
PHGDH-231	ENST00000641939	PAH	P00439	452 aa		12.27	□□□□□ -0.45
PHGDH-231	ENST00000641939	IGHV4-59	P01825	116 aa		12.27	□□□□□ -0.45
PHGDH-231	ENST00000641939	CRYBA1	P05813	215 aa		12.27	□□□□□ -0.45
PHGDH-231	ENST00000641939	TMEM225B	P0DP42	221 aa		12.27	□□□□□ -0.45
PHGDH-231	ENST00000641939	DLX6	P56179	175 aa		12.27	□□□□□ -0.45
PHGDH-231	ENST00000641939	TAS2R43	P59537	309 aa		12.27	□□□□□ -0.45
PHGDH-231	ENST00000641939	ERVFRD-1	P60508	538 aa		12.27	□□□□□ -0.45
PHGDH-231	ENST00000641939	MEF2C	Q06413	473 aa	Predicted RBP	12.27	□□□□□ -0.45
PHGDH-231	ENST00000641939	EDDM3A	Q14507	147 aa		12.27	□□□□□ -0.45
PHGDH-231	ENST00000641939	DMKN	Q6E0U4	476 aa	Predicted RBP	12.27	□□□□□ -0.45

Retrieved 100 of 20,778 RNA–protein pairs in 59.1 ms