RNA–Protein interactions for RNA: ENST00000641891.1

PHGDH-229, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 2,175 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-229ENST00000641891 RBM39Q14498 530 aaKnown RBP14.58□□□□□ -0.08
PHGDH-229ENST00000641891 FAM209AQ5JX71 171 aa14.58□□□□□ -0.08
PHGDH-229ENST00000641891 DHRS11Q6UWP2 260 aa14.58□□□□□ -0.08
PHGDH-229ENST00000641891 OR1K1Q8NGR3 316 aa14.58□□□□□ -0.08
PHGDH-229ENST00000641891 SLC25A32Q9H2D1 315 aa14.58□□□□□ -0.08
PHGDH-229ENST00000641891 C3orf80F5H4A9 247 aa14.57□□□□□ -0.08
PHGDH-229ENST00000641891 WISP2O76076 250 aa14.57□□□□□ -0.08
PHGDH-229ENST00000641891 FUT3P21217 361 aa14.57□□□□□ -0.08
PHGDH-229ENST00000641891 FCGR2CP31995 323 aa14.57□□□□□ -0.08
PHGDH-229ENST00000641891 PIGPP57054 158 aa14.57□□□□□ -0.08
PHGDH-229ENST00000641891 PLP2Q04941 152 aa14.57□□□□□ -0.08
PHGDH-229ENST00000641891 IGFBP7Q16270 282 aa14.57□□□□□ -0.08
PHGDH-229ENST00000641891 CEACAM21Q3KPI0 293 aa14.57□□□□□ -0.08
PHGDH-229ENST00000641891 SGPP2Q8IWX5 399 aa14.57□□□□□ -0.08
PHGDH-229ENST00000641891 ZDHHC11Q9H8X9 412 aa14.57□□□□□ -0.08
PHGDH-229ENST00000641891 C12orf4Q9NQ89 552 aa14.57□□□□□ -0.08
PHGDH-229ENST00000641891 ASPMQ8IZT6 3477 aa14.57□□□□□ -0.08
PHGDH-229ENST00000641891 LOC400499M0QZD8 3231 aa14.57□□□□□ -0.08
PHGDH-229ENST00000641891 CDRT15L2A8MXV6 281 aa14.57□□□□□ -0.08
PHGDH-229ENST00000641891 CST4P01036 141 aa14.57□□□□□ -0.08
PHGDH-229ENST00000641891 ZNF728P0DKX0 622 aa14.57□□□□□ -0.08
PHGDH-229ENST00000641891 WT1P19544 449 aaPredicted RBP14.57□□□□□ -0.08
PHGDH-229ENST00000641891 TNFSF10P50591 281 aa14.57□□□□□ -0.08
PHGDH-229ENST00000641891 CCL11P51671 97 aa14.57□□□□□ -0.08
PHGDH-229ENST00000641891 S100A10P60903 97 aa14.57□□□□□ -0.08
PHGDH-229ENST00000641891 SP6Q3SY56 376 aa14.57□□□□□ -0.08
PHGDH-229ENST00000641891 PRSS54Q6PEW0 395 aa14.57□□□□□ -0.08
PHGDH-229ENST00000641891 GLRX5Q86SX6 157 aa14.57□□□□□ -0.08
PHGDH-229ENST00000641891 MDP1Q86V88 176 aa14.57□□□□□ -0.08
PHGDH-229ENST00000641891 FOXRED2Q8IWF2 684 aa14.57□□□□□ -0.08
PHGDH-229ENST00000641891 ZNF286AQ9HBT8 521 aa14.57□□□□□ -0.08
PHGDH-229ENST00000641891 PCDHB16Q9NRJ7 776 aa14.57□□□□□ -0.08
PHGDH-229ENST00000641891 C1orf123Q9NWV4 160 aa14.57□□□□□ -0.08
PHGDH-229ENST00000641891 COQ3Q9NZJ6 369 aa14.57□□□□□ -0.08
PHGDH-229ENST00000641891 MTCH1Q9NZJ7 389 aa14.57□□□□□ -0.08
PHGDH-229ENST00000641891 CD300LBA8K4G0 201 aa14.56□□□□□ -0.08
PHGDH-229ENST00000641891 IL15RAQ13261 267 aa14.56□□□□□ -0.08
PHGDH-229ENST00000641891 CLN3Q13286 438 aa14.56□□□□□ -0.08
PHGDH-229ENST00000641891 PHLDA2Q53GA4 152 aa14.56□□□□□ -0.08
PHGDH-229ENST00000641891 FBXW9Q5XUX1 488 aa14.56□□□□□ -0.08
PHGDH-229ENST00000641891 TMEM178AQ8NBL3 297 aa14.56□□□□□ -0.08
PHGDH-229ENST00000641891 BCL2L2Q92843 193 aaPredicted RBP14.56□□□□□ -0.08
PHGDH-229ENST00000641891 PIK3IP1Q96FE7 263 aa14.56□□□□□ -0.08
PHGDH-229ENST00000641891 ZSCAN5BA6NJL1 495 aa14.56□□□□□ -0.08
PHGDH-229ENST00000641891 A8MXK9 166 aa14.56□□□□□ -0.08
PHGDH-229ENST00000641891 HSPB6O14558 160 aa14.56□□□□□ -0.08
PHGDH-229ENST00000641891 SYNGR1O43759 233 aa14.56□□□□□ -0.08
PHGDH-229ENST00000641891 FGF2P09038 288 aa14.56□□□□□ -0.08
PHGDH-229ENST00000641891 ZP3P21754 424 aa14.56□□□□□ -0.08
PHGDH-229ENST00000641891 APLNRP35414 380 aa14.56□□□□□ -0.08
PHGDH-229ENST00000641891 SPATA46Q5T0L3 261 aa14.56□□□□□ -0.08
PHGDH-229ENST00000641891 MYPOPQ86VE0 399 aaPredicted RBP14.56□□□□□ -0.08
PHGDH-229ENST00000641891 BVESQ8NE79 360 aa14.56□□□□□ -0.08
PHGDH-229ENST00000641891 FDCSPQ8NFU4 85 aa14.56□□□□□ -0.08
PHGDH-229ENST00000641891 EXTL1Q92935 676 aa14.56□□□□□ -0.08
PHGDH-229ENST00000641891 MRPL24Q96A35 216 aaKnown RBP14.56□□□□□ -0.08
PHGDH-229ENST00000641891 BARX1Q9HBU1 254 aaPredicted RBP14.56□□□□□ -0.08
PHGDH-229ENST00000641891 TNRC6AQ8NDV7 1962 aaKnown RBP14.55□□□□□ -0.08
PHGDH-229ENST00000641891 DOCK7Q96N67 2140 aa14.55□□□□□ -0.08
PHGDH-229ENST00000641891 A0A1W2PR80 420 aa14.55□□□□□ -0.08
PHGDH-229ENST00000641891 GLI4P10075 376 aa14.55□□□□□ -0.08
PHGDH-229ENST00000641891 LYL1P12980 280 aa14.55□□□□□ -0.08
PHGDH-229ENST00000641891 DUSP1P28562 367 aa14.55□□□□□ -0.08
PHGDH-229ENST00000641891 SNTB1Q13884 538 aaKnown RBP14.55□□□□□ -0.08
PHGDH-229ENST00000641891 IAH1Q2TAA2 248 aaPredicted RBP14.55□□□□□ -0.08
PHGDH-229ENST00000641891 IGSF11Q5DX21 431 aa14.55□□□□□ -0.08
PHGDH-229ENST00000641891 Q8NFD4 153 aa14.55□□□□□ -0.08
PHGDH-229ENST00000641891 OR11L1Q8NGX0 322 aa14.55□□□□□ -0.08
PHGDH-229ENST00000641891 ZNF488Q96MN9 340 aa14.55□□□□□ -0.08
PHGDH-229ENST00000641891 CYTL1Q9NRR1 136 aa14.55□□□□□ -0.08
PHGDH-229ENST00000641891 SESN1Q9Y6P5 492 aa14.55□□□□□ -0.08
PHGDH-229ENST00000641891 OR5AC1P0C628 307 aa14.54□□□□□ -0.08
PHGDH-229ENST00000641891 SOX8P57073 446 aa14.54□□□□□ -0.08
PHGDH-229ENST00000641891 FGF12P61328 243 aa14.54□□□□□ -0.08
PHGDH-229ENST00000641891 TMEM211Q6ICI0 200 aa14.54□□□□□ -0.08
PHGDH-229ENST00000641891 GCNT2Q8N0V5 402 aa14.54□□□□□ -0.08
PHGDH-229ENST00000641891 ASCL3Q9NQ33 180 aa14.54□□□□□ -0.08
PHGDH-229ENST00000641891 CELA3BP08861 270 aa14.54□□□□□ -0.08
PHGDH-229ENST00000641891 AADACP22760 399 aa14.54□□□□□ -0.08
PHGDH-229ENST00000641891 TUSC1Q2TAM9 212 aa14.54□□□□□ -0.08
PHGDH-229ENST00000641891 PLEKHN1Q494U1 663 aaPredicted RBP14.54□□□□□ -0.08
PHGDH-229ENST00000641891 ABCA11PQ4W5N1 156 aa14.54□□□□□ -0.08
PHGDH-229ENST00000641891 GGNBP1Q5YKI7 109 aa14.54□□□□□ -0.08
PHGDH-229ENST00000641891 ELP2Q6IA86 826 aa14.54□□□□□ -0.08
PHGDH-229ENST00000641891 TMEM200AQ86VY9 491 aa14.54□□□□□ -0.08
PHGDH-229ENST00000641891 SLC30A7Q8NEW0 376 aa14.54□□□□□ -0.08
PHGDH-229ENST00000641891 OR5L1Q8NGL2 311 aa14.54□□□□□ -0.08
PHGDH-229ENST00000641891 SUN5Q8TC36 379 aa14.54□□□□□ -0.08
PHGDH-229ENST00000641891 PHYHIPLQ96FC7 376 aa14.54□□□□□ -0.08
PHGDH-229ENST00000641891 NAA60Q9H7X0 242 aa14.54□□□□□ -0.08
PHGDH-229ENST00000641891 IL32P24001 234 aa14.53□□□□□ -0.08
PHGDH-229ENST00000641891 NUP62P37198 522 aaPredicted RBP14.53□□□□□ -0.08
PHGDH-229ENST00000641891 OR2T2Q6IF00 324 aa14.53□□□□□ -0.08
PHGDH-229ENST00000641891 HAGHLQ6PII5 290 aaPredicted RBP14.53□□□□□ -0.08
PHGDH-229ENST00000641891 P4HA3Q7Z4N8 544 aa14.53□□□□□ -0.08
PHGDH-229ENST00000641891 SREK1IP1Q8N9Q2 155 aaPredicted RBP14.53□□□□□ -0.08
PHGDH-229ENST00000641891 BOLLQ8N9W6 283 aaKnown RBP14.53□□□□□ -0.08
PHGDH-229ENST00000641891 RTN4IP1Q8WWV3 396 aaPredicted RBP14.53□□□□□ -0.08
PHGDH-229ENST00000641891 OR5P3Q8WZ94 311 aa14.53□□□□□ -0.08
PHGDH-229ENST00000641891 NUP50Q9UKX7 468 aa14.53□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 50.4 ms