RNA–Protein interactions for RNA: ENST00000641587.1

PHGDH-222, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 566 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-222ENST00000641587 NDUFA7O95182 113 aa8.29□□□□□ -1.08
PHGDH-222ENST00000641587 ATF1P18846 271 aa8.29□□□□□ -1.08
PHGDH-222ENST00000641587 CA6P23280 308 aa8.29□□□□□ -1.08
PHGDH-222ENST00000641587 SOX6P35712 828 aa8.29□□□□□ -1.08
PHGDH-222ENST00000641587 PITPNBP48739 271 aa8.29□□□□□ -1.08
PHGDH-222ENST00000641587 CAV3P56539 151 aa8.29□□□□□ -1.08
PHGDH-222ENST00000641587 OR10A3P58181 314 aa8.29□□□□□ -1.08
PHGDH-222ENST00000641587 CNPY1Q3B7I2 92 aa8.29□□□□□ -1.08
PHGDH-222ENST00000641587 ZNF404Q494X3 552 aa8.29□□□□□ -1.08
PHGDH-222ENST00000641587 DMRTC1Q5HYR2 192 aa8.29□□□□□ -1.08
PHGDH-222ENST00000641587 DDI2Q5TDH0 399 aa8.29□□□□□ -1.08
PHGDH-222ENST00000641587 GPR157Q5UAW9 335 aa8.29□□□□□ -1.08
PHGDH-222ENST00000641587 UTS2BQ765I0 119 aa8.29□□□□□ -1.08
PHGDH-222ENST00000641587 TPRA1Q86W33 373 aa8.29□□□□□ -1.08
PHGDH-222ENST00000641587 ZDHHC23Q8IYP9 409 aa8.29□□□□□ -1.08
PHGDH-222ENST00000641587 JAGN1Q8N5M9 183 aa8.29□□□□□ -1.08
PHGDH-222ENST00000641587 DNAAF1Q8NEP3 725 aa8.29□□□□□ -1.08
PHGDH-222ENST00000641587 OR8B3Q8NGG8 313 aa8.29□□□□□ -1.08
PHGDH-222ENST00000641587 OR51A2Q8NGJ7 313 aa8.29□□□□□ -1.08
PHGDH-222ENST00000641587 OR8S1Q8NH09 359 aa8.29□□□□□ -1.08
PHGDH-222ENST00000641587 ITFG2Q969R8 447 aa8.29□□□□□ -1.08
PHGDH-222ENST00000641587 HIST1H2AAQ96QV6 131 aa8.29□□□□□ -1.08
PHGDH-222ENST00000641587 OR8B2Q96RD0 313 aa8.29□□□□□ -1.08
PHGDH-222ENST00000641587 GPER1Q99527 375 aa8.29□□□□□ -1.08
PHGDH-222ENST00000641587 PCGF1Q9BSM1 259 aa8.29□□□□□ -1.08
PHGDH-222ENST00000641587 ADAT1Q9BUB4 502 aaKnown RBP8.29□□□□□ -1.08
PHGDH-222ENST00000641587 TMEM138Q9NPI0 162 aa8.29□□□□□ -1.08
PHGDH-222ENST00000641587 MIOXQ9UGB7 285 aa8.29□□□□□ -1.08
PHGDH-222ENST00000641587 SLC7A11Q9UPY5 501 aa8.29□□□□□ -1.08
PHGDH-222ENST00000641587 AK6Q9Y3D8 172 aaKnown RBP8.29□□□□□ -1.08
PHGDH-222ENST00000641587 RNF114Q9Y508 228 aa8.29□□□□□ -1.08
PHGDH-222ENST00000641587 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP8.28□□□□□ -1.08
PHGDH-222ENST00000641587 FAM230AA0A1W2PPH8 454 aa8.28□□□□□ -1.08
PHGDH-222ENST00000641587 MEGF11A6BM72 1044 aa8.28□□□□□ -1.08
PHGDH-222ENST00000641587 CST4P01036 141 aa8.28□□□□□ -1.08
PHGDH-222ENST00000641587 IGHV4-59P01825 116 aa8.28□□□□□ -1.08
PHGDH-222ENST00000641587 IGFBP3P17936 291 aaPredicted RBP8.28□□□□□ -1.08
PHGDH-222ENST00000641587 PRKACBP22694 351 aa8.28□□□□□ -1.08
PHGDH-222ENST00000641587 AZGP1P25311 298 aaKnown RBP8.28□□□□□ -1.08
PHGDH-222ENST00000641587 RPS19P39019 145 aaKnown RBP8.28□□□□□ -1.08
PHGDH-222ENST00000641587 OR8G1Q15617 311 aa8.28□□□□□ -1.08
PHGDH-222ENST00000641587 UBE2V2Q15819 145 aa8.28□□□□□ -1.08
PHGDH-222ENST00000641587 WDR25Q64LD2 544 aaPredicted RBP8.28□□□□□ -1.08
PHGDH-222ENST00000641587 GLT8D1Q68CQ7 371 aa8.28□□□□□ -1.08
PHGDH-222ENST00000641587 ZNF841Q6ZN19 808 aa8.28□□□□□ -1.08
PHGDH-222ENST00000641587 LRRTM1Q86UE6 522 aa8.28□□□□□ -1.08
PHGDH-222ENST00000641587 NKAIN3Q8N8D7 197 aa8.28□□□□□ -1.08
PHGDH-222ENST00000641587 OR8G5Q8NG78 346 aa8.28□□□□□ -1.08
PHGDH-222ENST00000641587 LINC01006Q8NI28 216 aa8.28□□□□□ -1.08
PHGDH-222ENST00000641587 FAM110DQ8TAY7 271 aaPredicted RBP8.28□□□□□ -1.08
PHGDH-222ENST00000641587 RFT1Q96AA3 541 aa8.28□□□□□ -1.08
PHGDH-222ENST00000641587 BORCS8Q96FH0 119 aa8.28□□□□□ -1.08
PHGDH-222ENST00000641587 TECTBQ96PL2 329 aa8.28□□□□□ -1.08
PHGDH-222ENST00000641587 SPACA5Q96QH8 159 aa8.28□□□□□ -1.08
PHGDH-222ENST00000641587 TBX15Q96SF7 602 aa8.28□□□□□ -1.08
PHGDH-222ENST00000641587 MICU1Q9BPX6 476 aa8.28□□□□□ -1.08
PHGDH-222ENST00000641587 PPP1R3EQ9H7J1 279 aa8.28□□□□□ -1.08
PHGDH-222ENST00000641587 PLGRKTQ9HBL7 147 aa8.28□□□□□ -1.08
PHGDH-222ENST00000641587 ABCB9Q9NP78 766 aa8.28□□□□□ -1.08
PHGDH-222ENST00000641587 TMEM100Q9NV29 134 aa8.28□□□□□ -1.08
PHGDH-222ENST00000641587 MRPL15Q9P015 296 aaKnown RBP8.28□□□□□ -1.08
PHGDH-222ENST00000641587 CTSZQ9UBR2 303 aa8.28□□□□□ -1.08
PHGDH-222ENST00000641587 CLN8Q9UBY8 286 aa8.28□□□□□ -1.08
PHGDH-222ENST00000641587 MPC1Q9Y5U8 109 aa8.28□□□□□ -1.08
PHGDH-222ENST00000641587 V9GY05 133 aa8.28□□□□□ -1.08
PHGDH-222ENST00000641587 CENPVL3A0A0U1RRI6 287 aa8.27□□□□□ -1.09
PHGDH-222ENST00000641587 GPR137BO60478 399 aa8.27□□□□□ -1.09
PHGDH-222ENST00000641587 PRB2P02812 416 aaPredicted RBP8.27□□□□□ -1.09
PHGDH-222ENST00000641587 MMP9P14780 707 aa8.27□□□□□ -1.09
PHGDH-222ENST00000641587 ZNF182P17025 639 aaPredicted RBP8.27□□□□□ -1.09
PHGDH-222ENST00000641587 CFHR2P36980 270 aa8.27□□□□□ -1.09
PHGDH-222ENST00000641587 RORCP51449 518 aa8.27□□□□□ -1.09
PHGDH-222ENST00000641587 PSMD7P51665 324 aa8.27□□□□□ -1.09
PHGDH-222ENST00000641587 PROK1P58294 105 aa8.27□□□□□ -1.09
PHGDH-222ENST00000641587 TAF9Q16594 264 aa8.27□□□□□ -1.09
PHGDH-222ENST00000641587 DGUOKQ16854 277 aa8.27□□□□□ -1.09
PHGDH-222ENST00000641587 IDNKQ5T6J7 187 aa8.27□□□□□ -1.09
PHGDH-222ENST00000641587 HES5Q5TA89 166 aa8.27□□□□□ -1.09
PHGDH-222ENST00000641587 PRAMEF6Q5VXH4 476 aa8.27□□□□□ -1.09
PHGDH-222ENST00000641587 TMEM42Q69YG0 159 aa8.27□□□□□ -1.09
PHGDH-222ENST00000641587 SFXN4Q6P4A7 337 aa8.27□□□□□ -1.09
PHGDH-222ENST00000641587 LHFPL2Q6ZUX7 228 aa8.27□□□□□ -1.09
PHGDH-222ENST00000641587 NLRC3Q7RTR2 1065 aa8.27□□□□□ -1.09
PHGDH-222ENST00000641587 PNLDC1Q8NA58 520 aaKnown RBP8.27□□□□□ -1.09
PHGDH-222ENST00000641587 OR52N4Q8NGI2 321 aa8.27□□□□□ -1.09
PHGDH-222ENST00000641587 OR13G1Q8NGZ3 307 aa8.27□□□□□ -1.09
PHGDH-222ENST00000641587 DYNC2LI1Q8TCX1 351 aa8.27□□□□□ -1.09
PHGDH-222ENST00000641587 SLC25A46Q96AG3 418 aa8.27□□□□□ -1.09
PHGDH-222ENST00000641587 SPSB1Q96BD6 273 aa8.27□□□□□ -1.09
PHGDH-222ENST00000641587 CPNE2Q96FN4 548 aaPredicted RBP8.27□□□□□ -1.09
PHGDH-222ENST00000641587 NKX3-1Q99801 234 aaPredicted RBP8.27□□□□□ -1.09
PHGDH-222ENST00000641587 RTL8AQ9BWD3 113 aa8.27□□□□□ -1.09
PHGDH-222ENST00000641587 SLC22A4Q9H015 551 aa8.27□□□□□ -1.09
PHGDH-222ENST00000641587 SMURF1Q9HCE7 757 aa8.27□□□□□ -1.09
PHGDH-222ENST00000641587 CCDC59Q9P031 241 aaKnown RBP8.27□□□□□ -1.09
PHGDH-222ENST00000641587 DAPK2Q9UIK4 370 aa8.27□□□□□ -1.09
PHGDH-222ENST00000641587 NOP16Q9Y3C1 178 aaKnown RBP8.27□□□□□ -1.09
PHGDH-222ENST00000641587 DNAH3Q8TD57 4116 aa8.27□□□□□ -1.09
PHGDH-222ENST00000641587 IGKV1-9A0A0C4DH69 117 aa8.26□□□□□ -1.09
PHGDH-222ENST00000641587 A0A0U1RQK1 487 aa8.26□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms