RNA–Protein interactions for RNA: ENST00000640388.1

ATM-230, Transcript of ATM serine/threonine kinase, humanhuman

TSL 5 BASIC

Gene ATM, Length 578 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATM-230ENST00000640388 CERS2Q96G23 380 aa1.81□□□□□ -2.12
ATM-230ENST00000640388 CEP170P1Q96L14 293 aa1.81□□□□□ -2.12
ATM-230ENST00000640388 KLF6Q99612 283 aaPredicted RBP1.81□□□□□ -2.12
ATM-230ENST00000640388 ROGDIQ9GZN7 287 aa1.81□□□□□ -2.12
ATM-230ENST00000640388 GAL3ST2Q9H3Q3 398 aa1.81□□□□□ -2.12
ATM-230ENST00000640388 TPK1Q9H3S4 243 aa1.81□□□□□ -2.12
ATM-230ENST00000640388 HAUS4Q9H6D7 363 aa1.81□□□□□ -2.12
ATM-230ENST00000640388 ZC4H2Q9NQZ6 224 aa1.81□□□□□ -2.12
ATM-230ENST00000640388 CLN6Q9NWW5 311 aa1.81□□□□□ -2.12
ATM-230ENST00000640388 SLC25A37Q9NYZ2 338 aa1.81□□□□□ -2.12
ATM-230ENST00000640388 HS3ST2Q9Y278 367 aa1.81□□□□□ -2.12
ATM-230ENST00000640388 STK38LQ9Y2H1 464 aa1.81□□□□□ -2.12
ATM-230ENST00000640388 BZW2Q9Y6E2 419 aaKnown RBP1.81□□□□□ -2.12
ATM-230ENST00000640388 LRP1Q07954 4544 aaKnown RBP1.81□□□□□ -2.12
ATM-230ENST00000640388 NUP214P35658 2090 aaPredicted RBP1.8□□□□□ -2.12
ATM-230ENST00000640388 ANKRD12Q6UB98 2062 aa1.8□□□□□ -2.12
ATM-230ENST00000640388 SPRR5A0A1B0GTR4 108 aa1.8□□□□□ -2.12
ATM-230ENST00000640388 A0A1B0GVI7 797 aa1.8□□□□□ -2.12
ATM-230ENST00000640388 TSPAN11A1L157 253 aa1.8□□□□□ -2.12
ATM-230ENST00000640388 H0YHG0 523 aa1.8□□□□□ -2.12
ATM-230ENST00000640388 H3BNH8 94 aa1.8□□□□□ -2.12
ATM-230ENST00000640388 PEX7O00628 323 aa1.8□□□□□ -2.12
ATM-230ENST00000640388 XKRYO14609 159 aa1.8□□□□□ -2.12
ATM-230ENST00000640388 PPP1R2P9O14990 202 aa1.8□□□□□ -2.12
ATM-230ENST00000640388 XRCC2O43543 280 aa1.8□□□□□ -2.12
ATM-230ENST00000640388 KDELR3O43731 214 aa1.8□□□□□ -2.12
ATM-230ENST00000640388 DEDDO75618 318 aa1.8□□□□□ -2.12
ATM-230ENST00000640388 LSM8O95777 96 aaKnown RBP1.8□□□□□ -2.12
ATM-230ENST00000640388 PAHP00439 452 aa1.8□□□□□ -2.12
ATM-230ENST00000640388 HBE1P02100 147 aa1.8□□□□□ -2.12
ATM-230ENST00000640388 MBP02144 154 aa1.8□□□□□ -2.12
ATM-230ENST00000640388 IFNW1P05000 195 aa1.8□□□□□ -2.12
ATM-230ENST00000640388 GKN3PP0CG01 181 aa1.8□□□□□ -2.12
ATM-230ENST00000640388 IGHV3-43DP0DP04 118 aa1.8□□□□□ -2.12
ATM-230ENST00000640388 CTSEP14091 401 aa1.8□□□□□ -2.12
ATM-230ENST00000640388 FOLR1P15328 257 aa1.8□□□□□ -2.12
ATM-230ENST00000640388 ZNF250P15622 560 aa1.8□□□□□ -2.12
ATM-230ENST00000640388 ZNF30P17039 623 aa1.8□□□□□ -2.12
ATM-230ENST00000640388 OMGP23515 440 aa1.8□□□□□ -2.12
ATM-230ENST00000640388 LOXP28300 417 aaPredicted RBP1.8□□□□□ -2.12
ATM-230ENST00000640388 BTCP35070 178 aa1.8□□□□□ -2.12
ATM-230ENST00000640388 NMUP48645 174 aa1.8□□□□□ -2.12
ATM-230ENST00000640388 RORCP51449 518 aa1.8□□□□□ -2.12
ATM-230ENST00000640388 CRISP3P54108 245 aa1.8□□□□□ -2.12
ATM-230ENST00000640388 TAS2R39P59534 338 aa1.8□□□□□ -2.12
ATM-230ENST00000640388 RPS21P63220 83 aaKnown RBP1.8□□□□□ -2.12
ATM-230ENST00000640388 SMARCB1Q12824 385 aa1.8□□□□□ -2.12
ATM-230ENST00000640388 CDH17Q12864 832 aa1.8□□□□□ -2.12
ATM-230ENST00000640388 AQP6Q13520 282 aa1.8□□□□□ -2.12
ATM-230ENST00000640388 KIAA0087Q14695 138 aa1.8□□□□□ -2.12
ATM-230ENST00000640388 OR7A5Q15622 319 aa1.8□□□□□ -2.12
ATM-230ENST00000640388 ZNHIT3Q15649 155 aaPredicted RBP1.8□□□□□ -2.12
ATM-230ENST00000640388 VAMP3Q15836 100 aa1.8□□□□□ -2.12
ATM-230ENST00000640388 SNRNP35Q16560 246 aaKnown RBP1.8□□□□□ -2.12
ATM-230ENST00000640388 TAF9Q16594 264 aa1.8□□□□□ -2.12
ATM-230ENST00000640388 FAM83EQ2M2I3 478 aa1.8□□□□□ -2.12
ATM-230ENST00000640388 RPEL1Q2QD12 228 aa1.8□□□□□ -2.12
ATM-230ENST00000640388 FBXL19-AS1Q494R0 122 aa1.8□□□□□ -2.12
ATM-230ENST00000640388 TMEM255AQ5JRV8 349 aa1.8□□□□□ -2.12
ATM-230ENST00000640388 COA6Q5JTJ3 125 aaKnown RBP1.8□□□□□ -2.12
ATM-230ENST00000640388 ULK3Q6PHR2 472 aa1.8□□□□□ -2.12
ATM-230ENST00000640388 CNIH2Q6PI25 160 aa1.8□□□□□ -2.12
ATM-230ENST00000640388 NPSR1Q6W5P4 371 aa1.8□□□□□ -2.12
ATM-230ENST00000640388 SLC35D2Q76EJ3 337 aa1.8□□□□□ -2.12
ATM-230ENST00000640388 SNX31Q8N9S9 440 aa1.8□□□□□ -2.12
ATM-230ENST00000640388 OR2A1Q8NGT9 310 aa1.8□□□□□ -2.12
ATM-230ENST00000640388 CCL4L1Q8NHW4 92 aa1.8□□□□□ -2.12
ATM-230ENST00000640388 ZNF596Q8TC21 504 aa1.8□□□□□ -2.12
ATM-230ENST00000640388 MCOLN3Q8TDD5 553 aa1.8□□□□□ -2.12
ATM-230ENST00000640388 PATE1Q8WXA2 126 aa1.8□□□□□ -2.12
ATM-230ENST00000640388 SEH1LQ96EE3 360 aa1.8□□□□□ -2.12
ATM-230ENST00000640388 P2RX4Q99571 388 aa1.8□□□□□ -2.12
ATM-230ENST00000640388 SIKE1Q9BRV8 207 aa1.8□□□□□ -2.12
ATM-230ENST00000640388 RTBDNQ9BSG5 229 aaPredicted RBP1.8□□□□□ -2.12
ATM-230ENST00000640388 PIGUQ9H490 435 aa1.8□□□□□ -2.12
ATM-230ENST00000640388 DYRK4Q9NR20 520 aa1.8□□□□□ -2.12
ATM-230ENST00000640388 CCL28Q9NRJ3 127 aa1.8□□□□□ -2.12
ATM-230ENST00000640388 TRAPPC4Q9Y296 219 aa1.8□□□□□ -2.12
ATM-230ENST00000640388 RCL1Q9Y2P8 373 aaKnown RBP1.8□□□□□ -2.12
ATM-230ENST00000640388 KCNE3Q9Y6H6 103 aa1.8□□□□□ -2.12
ATM-230ENST00000640388 SYNE2Q8WXH0 6885 aaKnown RBP1.8□□□□□ -2.12
ATM-230ENST00000640388 SPTBP11277 2137 aa1.79□□□□□ -2.12
ATM-230ENST00000640388 KIR2DL5BA0A0G2JN68 375 aa1.79□□□□□ -2.12
ATM-230ENST00000640388 KIR2DL5BA0A0G2JPC4 375 aa1.79□□□□□ -2.12
ATM-230ENST00000640388 LOC100506127A0A0U1RQW1 187 aa1.79□□□□□ -2.12
ATM-230ENST00000640388 ZNF816-ZNF321PA0A0X1KG74 233 aa1.79□□□□□ -2.12
ATM-230ENST00000640388 SLC5A10A0PJK1 596 aa1.79□□□□□ -2.12
ATM-230ENST00000640388 C5orf63A6NC05 138 aa1.79□□□□□ -2.12
ATM-230ENST00000640388 SLC22A20A6NK97 555 aa1.79□□□□□ -2.12
ATM-230ENST00000640388 SMKR1H3BMG3 65 aa1.79□□□□□ -2.12
ATM-230ENST00000640388 PSMD11O00231 422 aa1.79□□□□□ -2.12
ATM-230ENST00000640388 CYTH3O43739 400 aa1.79□□□□□ -2.12
ATM-230ENST00000640388 FKBP6O75344 327 aa1.79□□□□□ -2.12
ATM-230ENST00000640388 SPAG7O75391 227 aa1.79□□□□□ -2.12
ATM-230ENST00000640388 HSBP1O75506 76 aa1.79□□□□□ -2.12
ATM-230ENST00000640388 SRP72O76094 671 aaKnown RBP1.79□□□□□ -2.12
ATM-230ENST00000640388 FARS2O95363 451 aaKnown RBP1.79□□□□□ -2.12
ATM-230ENST00000640388 CSF3P09919 207 aa1.79□□□□□ -2.12
ATM-230ENST00000640388 ACSM4P0C7M7 580 aa1.79□□□□□ -2.12
ATM-230ENST00000640388 GFAPP14136 432 aa1.79□□□□□ -2.12
Retrieved 100 of 20,778 RNA–protein pairs in 70.7 ms