RNA–Protein interactions for RNA: ENST00000636610.1

CACNA1A-228, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

TSL 5

Gene CACNA1A, Length 3,011 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-228ENST00000636610 NSG1A0A0A6YYJ2 146 aa12.17□□□□□ -0.46
CACNA1A-228ENST00000636610 FAM24AA6NFZ4 105 aa12.17□□□□□ -0.46
CACNA1A-228ENST00000636610 EIF3GO75821 320 aaKnown RBP eCLIP12.17□□□□□ -0.46
CACNA1A-228ENST00000636610 CARD18P57730 90 aa12.17□□□□□ -0.46
CACNA1A-228ENST00000636610 IL34Q6ZMJ4 242 aa12.17□□□□□ -0.46
CACNA1A-228ENST00000636610 AAED1Q7RTV5 226 aa12.17□□□□□ -0.46
CACNA1A-228ENST00000636610 MAFAQ8NHW3 353 aaPredicted RBP12.17□□□□□ -0.46
CACNA1A-228ENST00000636610 NUDT16L1Q9BRJ7 211 aaKnown RBP12.17□□□□□ -0.46
CACNA1A-228ENST00000636610 IGHV1-45A0A0A0MS14 117 aa12.16□□□□□ -0.46
CACNA1A-228ENST00000636610 ARPC4-TTLL3A0A0A6YYG9 625 aa12.16□□□□□ -0.46
CACNA1A-228ENST00000636610 A0A0U1RQV5 110 aa12.16□□□□□ -0.46
CACNA1A-228ENST00000636610 LINC01387J3KSC0 135 aa12.16□□□□□ -0.46
CACNA1A-228ENST00000636610 DKK1O94907 266 aa12.16□□□□□ -0.46
CACNA1A-228ENST00000636610 PDGFBP01127 241 aaPredicted RBP12.16□□□□□ -0.46
CACNA1A-228ENST00000636610 COX6A1P12074 109 aa12.16□□□□□ -0.46
CACNA1A-228ENST00000636610 SULT1A2P50226 295 aa12.16□□□□□ -0.46
CACNA1A-228ENST00000636610 PSG4Q00888 419 aa12.16□□□□□ -0.46
CACNA1A-228ENST00000636610 EIF5AL1Q6IS14 154 aaKnown RBP12.16□□□□□ -0.46
CACNA1A-228ENST00000636610 OPN5Q6U736 354 aa12.16□□□□□ -0.46
CACNA1A-228ENST00000636610 Q6ZPA2 131 aa12.16□□□□□ -0.46
CACNA1A-228ENST00000636610 SLC16A14Q7RTX9 510 aa12.16□□□□□ -0.46
CACNA1A-228ENST00000636610 OR1F12Q8NHA8 337 aa12.16□□□□□ -0.46
CACNA1A-228ENST00000636610 SAP25Q8TEE9 199 aa12.16□□□□□ -0.46
CACNA1A-228ENST00000636610 TP53RKQ96S44 253 aa12.16□□□□□ -0.46
CACNA1A-228ENST00000636610 NECAP2Q9NVZ3 263 aa12.16□□□□□ -0.46
CACNA1A-228ENST00000636610 CRIM1Q9NZV1 1036 aa12.16□□□□□ -0.46
CACNA1A-228ENST00000636610 IGLV3-32A0A0A0MS00 114 aa12.16□□□□□ -0.46
CACNA1A-228ENST00000636610 A0A1W2PPE3 182 aa12.16□□□□□ -0.46
CACNA1A-228ENST00000636610 A0A1W2PPH5 198 aa12.16□□□□□ -0.46
CACNA1A-228ENST00000636610 K7ESF4 209 aa12.16□□□□□ -0.46
CACNA1A-228ENST00000636610 KLF7O75840 302 aaPredicted RBP12.16□□□□□ -0.46
CACNA1A-228ENST00000636610 CST7O76096 145 aa12.16□□□□□ -0.46
CACNA1A-228ENST00000636610 AADACP22760 399 aa12.16□□□□□ -0.46
CACNA1A-228ENST00000636610 PPP1CCP36873 323 aaKnown RBP12.16□□□□□ -0.46
CACNA1A-228ENST00000636610 KCNMB1Q16558 191 aa12.16□□□□□ -0.46
CACNA1A-228ENST00000636610 TMEM268Q5VZI3 342 aa12.16□□□□□ -0.46
CACNA1A-228ENST00000636610 BTNL8Q6UX41 500 aa12.16□□□□□ -0.46
CACNA1A-228ENST00000636610 GPR137CQ8N3F9 429 aa12.16□□□□□ -0.46
CACNA1A-228ENST00000636610 RARRES2Q99969 163 aa12.16□□□□□ -0.46
CACNA1A-228ENST00000636610 PISDQ9UG56 409 aa12.16□□□□□ -0.46
CACNA1A-228ENST00000636610 CTSDP07339 412 aaPredicted RBP12.16□□□□□ -0.46
CACNA1A-228ENST00000636610 ZNF44P15621 663 aa12.16□□□□□ -0.46
CACNA1A-228ENST00000636610 POLR2GP62487 172 aaKnown RBP eCLIP12.16□□□□□ -0.46
CACNA1A-228ENST00000636610 IZUMO4Q1ZYL8 232 aa12.16□□□□□ -0.46
CACNA1A-228ENST00000636610 AWAT1Q58HT5 328 aa12.16□□□□□ -0.46
CACNA1A-228ENST00000636610 ADAM5Q6NVV9 412 aa12.16□□□□□ -0.46
CACNA1A-228ENST00000636610 RNF138Q8WVD3 245 aa12.16□□□□□ -0.46
CACNA1A-228ENST00000636610 NAT6Q93015 286 aa12.16□□□□□ -0.46
CACNA1A-228ENST00000636610 TMEM54Q969K7 222 aa12.16□□□□□ -0.46
CACNA1A-228ENST00000636610 RGCCQ9H4X1 137 aa12.16□□□□□ -0.46
CACNA1A-228ENST00000636610 DNAJB11Q9UBS4 358 aa12.16□□□□□ -0.46
CACNA1A-228ENST00000636610 ZDHHC8Q9ULC8 765 aa12.16□□□□□ -0.46
CACNA1A-228ENST00000636610 PUS1Q9Y606 427 aaKnown RBP eCLIP12.16□□□□□ -0.46
CACNA1A-228ENST00000636610 TRAV39A0A0B4J263 110 aa12.15□□□□□ -0.46
CACNA1A-228ENST00000636610 H3BP45 60 aa12.15□□□□□ -0.46
CACNA1A-228ENST00000636610 FOXG1P55316 489 aaPredicted RBP12.15□□□□□ -0.46
CACNA1A-228ENST00000636610 DSCR4P56555 118 aaPredicted RBP12.15□□□□□ -0.46
CACNA1A-228ENST00000636610 FAM24BQ8N5W8 94 aa12.15□□□□□ -0.46
CACNA1A-228ENST00000636610 SLC35G3Q8N808 338 aa12.15□□□□□ -0.46
CACNA1A-228ENST00000636610 ZFP62Q8NB50 900 aaPredicted RBP12.15□□□□□ -0.46
CACNA1A-228ENST00000636610 ADPRHL1Q8NDY3 354 aa12.15□□□□□ -0.46
CACNA1A-228ENST00000636610 TM2D1Q9BX74 207 aa12.15□□□□□ -0.46
CACNA1A-228ENST00000636610 NAA60Q9H7X0 242 aa12.15□□□□□ -0.46
CACNA1A-228ENST00000636610 COLCA2A8K830 154 aa12.15□□□□□ -0.46
CACNA1A-228ENST00000636610 JTBO76095 146 aa12.15□□□□□ -0.46
CACNA1A-228ENST00000636610 TLE1Q04724 770 aa12.15□□□□□ -0.46
CACNA1A-228ENST00000636610 FAM189A2Q15884 450 aa12.15□□□□□ -0.46
CACNA1A-228ENST00000636610 GUK1Q16774 197 aa12.15□□□□□ -0.46
CACNA1A-228ENST00000636610 P4HA3Q7Z4N8 544 aa12.15□□□□□ -0.46
CACNA1A-228ENST00000636610 SKA3Q8IX90 412 aa12.15□□□□□ -0.46
CACNA1A-228ENST00000636610 OSR2Q8N2R0 312 aa12.15□□□□□ -0.46
CACNA1A-228ENST00000636610 NANPQ8TBE9 248 aa12.15□□□□□ -0.46
CACNA1A-228ENST00000636610 BIN3Q9NQY0 253 aa12.15□□□□□ -0.46
CACNA1A-228ENST00000636610 EDARQ9UNE0 448 aa12.15□□□□□ -0.46
CACNA1A-228ENST00000636610 A0A1W2PPE2 198 aa12.14□□□□□ -0.47
CACNA1A-228ENST00000636610 NKX2-6A6NCS4 301 aa12.14□□□□□ -0.47
CACNA1A-228ENST00000636610 EIF1BO60739 113 aaKnown RBP12.14□□□□□ -0.47
CACNA1A-228ENST00000636610 FBP1P09467 338 aa12.14□□□□□ -0.47
CACNA1A-228ENST00000636610 ZNF806P0C7X5 589 aa12.14□□□□□ -0.47
CACNA1A-228ENST00000636610 CHATP28329 748 aa12.14□□□□□ -0.47
CACNA1A-228ENST00000636610 HERV-K104P61576 105 aa12.14□□□□□ -0.47
CACNA1A-228ENST00000636610 TMEM187Q14656 261 aa12.14□□□□□ -0.47
CACNA1A-228ENST00000636610 TSC22D1Q15714 1073 aa12.14□□□□□ -0.47
CACNA1A-228ENST00000636610 C10orf128Q5T292 105 aa12.14□□□□□ -0.47
CACNA1A-228ENST00000636610 FAM27BQ5VT28 67 aa12.14□□□□□ -0.47
CACNA1A-228ENST00000636610 SFT2D1Q8WV19 159 aa12.14□□□□□ -0.47
CACNA1A-228ENST00000636610 ZNF488Q96MN9 340 aa12.14□□□□□ -0.47
CACNA1A-228ENST00000636610 FOXD3Q9UJU5 478 aaPredicted RBP12.14□□□□□ -0.47
CACNA1A-228ENST00000636610 SIT1Q9Y3P8 196 aa12.14□□□□□ -0.47
CACNA1A-228ENST00000636610 LAMA5O15230 3695 aa12.14□□□□□ -0.47
CACNA1A-228ENST00000636610 C9J4A7 227 aa12.14□□□□□ -0.47
CACNA1A-228ENST00000636610 SYNGR3O43761 229 aa12.14□□□□□ -0.47
CACNA1A-228ENST00000636610 S100A6P06703 90 aa12.14□□□□□ -0.47
CACNA1A-228ENST00000636610 RD3LP0DJH9 198 aa12.14□□□□□ -0.47
CACNA1A-228ENST00000636610 LYL1P12980 280 aa12.14□□□□□ -0.47
CACNA1A-228ENST00000636610 PRR18Q8N4B5 295 aa12.14□□□□□ -0.47
CACNA1A-228ENST00000636610 OR10D3Q8NH80 312 aa12.14□□□□□ -0.47
CACNA1A-228ENST00000636610 SAT2Q96F10 170 aaPredicted RBP12.14□□□□□ -0.47
CACNA1A-228ENST00000636610 USB1Q9BQ65 265 aaKnown RBP12.14□□□□□ -0.47
CACNA1A-228ENST00000636610 GHRLQ9UBU3 117 aa12.14□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 49.5 ms