RNA–Protein interactions for RNA: ENST00000636020.1

CLN6-212, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 2

Gene CLN6, Length 894 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-212ENST00000636020 ISYNA1Q9NPH2 558 aa14.13□□□□□ -0.15
CLN6-212ENST00000636020 IL20Q9NYY1 176 aa14.13□□□□□ -0.15
CLN6-212ENST00000636020 UBE2J1Q9Y385 318 aaPredicted RBP14.13□□□□□ -0.15
CLN6-212ENST00000636020 AP4M1O00189 453 aa14.12□□□□□ -0.15
CLN6-212ENST00000636020 NCK1P16333 377 aa14.12□□□□□ -0.15
CLN6-212ENST00000636020 CDK2P24941 298 aa14.12□□□□□ -0.15
CLN6-212ENST00000636020 GSTT1P30711 240 aa14.12□□□□□ -0.15
CLN6-212ENST00000636020 ASPHD1Q5U4P2 390 aa14.12□□□□□ -0.15
CLN6-212ENST00000636020 OR56B4Q8NH76 319 aa14.12□□□□□ -0.15
CLN6-212ENST00000636020 DDB2Q92466 427 aa14.12□□□□□ -0.15
CLN6-212ENST00000636020 SPATA25Q9BR10 227 aa14.12□□□□□ -0.15
CLN6-212ENST00000636020 C19orf73Q9NVV2 129 aa14.12□□□□□ -0.15
CLN6-212ENST00000636020 DNAJB9Q9UBS3 223 aa14.12□□□□□ -0.15
CLN6-212ENST00000636020 ENPP5Q9UJA9 477 aa14.12□□□□□ -0.15
CLN6-212ENST00000636020 PIGLQ9Y2B2 252 aa14.12□□□□□ -0.15
CLN6-212ENST00000636020 F8VVB4 439 aa14.11□□□□□ -0.15
CLN6-212ENST00000636020 F8VWA3 439 aa14.11□□□□□ -0.15
CLN6-212ENST00000636020 TOR1AO14656 332 aa14.11□□□□□ -0.15
CLN6-212ENST00000636020 GSC2O15499 205 aa14.11□□□□□ -0.15
CLN6-212ENST00000636020 IGHA1P01876 353 aa14.11□□□□□ -0.15
CLN6-212ENST00000636020 IGHV4-30-4P0DP06 118 aa14.11□□□□□ -0.15
CLN6-212ENST00000636020 TMEM11P17152 192 aa14.11□□□□□ -0.15
CLN6-212ENST00000636020 PEX2P28328 305 aa14.11□□□□□ -0.15
CLN6-212ENST00000636020 GDNFP39905 211 aa14.11□□□□□ -0.15
CLN6-212ENST00000636020 HNF4GQ14541 408 aa14.11□□□□□ -0.15
CLN6-212ENST00000636020 GRK1Q15835 563 aa14.11□□□□□ -0.15
CLN6-212ENST00000636020 ARPINQ7Z6K5 226 aa14.11□□□□□ -0.15
CLN6-212ENST00000636020 TRAPPC6BQ86SZ2 158 aa14.11□□□□□ -0.15
CLN6-212ENST00000636020 ANGPTL5Q86XS5 388 aa14.11□□□□□ -0.15
CLN6-212ENST00000636020 FAM71E2Q8N5Q1 922 aa14.11□□□□□ -0.15
CLN6-212ENST00000636020 IL17DQ8TAD2 202 aa14.11□□□□□ -0.15
CLN6-212ENST00000636020 TRMT10AQ8TBZ6 339 aaKnown RBP14.11□□□□□ -0.15
CLN6-212ENST00000636020 THEM6Q8WUY1 208 aa14.11□□□□□ -0.15
CLN6-212ENST00000636020 GON7Q9BXV9 100 aa14.11□□□□□ -0.15
CLN6-212ENST00000636020 CHST6Q9GZX3 395 aa14.11□□□□□ -0.15
CLN6-212ENST00000636020 SAR1AQ9NR31 198 aa14.11□□□□□ -0.15
CLN6-212ENST00000636020 A8MZ25 164 aa14.1□□□□□ -0.15
CLN6-212ENST00000636020 NME4O00746 187 aa14.1□□□□□ -0.15
CLN6-212ENST00000636020 CCDC22O60826 627 aa14.1□□□□□ -0.15
CLN6-212ENST00000636020 IGLV3-1P01715 115 aa14.1□□□□□ -0.15
CLN6-212ENST00000636020 LYNP07948 512 aa14.1□□□□□ -0.15
CLN6-212ENST00000636020 OR8U8P0C7N1 319 aa14.1□□□□□ -0.15
CLN6-212ENST00000636020 PRRX1P54821 245 aa14.1□□□□□ -0.15
CLN6-212ENST00000636020 IL24Q13007 206 aa14.1□□□□□ -0.15
CLN6-212ENST00000636020 HES1Q14469 280 aa14.1□□□□□ -0.15
CLN6-212ENST00000636020 MAPRE2Q15555 327 aa14.1□□□□□ -0.15
CLN6-212ENST00000636020 ASRGL1Q7L266 308 aa14.1□□□□□ -0.15
CLN6-212ENST00000636020 OTOSQ8NHW6 89 aa14.1□□□□□ -0.15
CLN6-212ENST00000636020 GAL3ST2Q9H3Q3 398 aa14.1□□□□□ -0.15
CLN6-212ENST00000636020 SEBOXQ9HB31 216 aaPredicted RBP14.1□□□□□ -0.15
CLN6-212ENST00000636020 PCDHB16Q9NRJ7 776 aa14.1□□□□□ -0.15
CLN6-212ENST00000636020 EBAG9O00559 213 aa14.09□□□□□ -0.15
CLN6-212ENST00000636020 PSPNO60542 156 aa14.09□□□□□ -0.15
CLN6-212ENST00000636020 ERP29P30040 261 aaKnown RBP14.09□□□□□ -0.15
CLN6-212ENST00000636020 GPR12P47775 334 aa14.09□□□□□ -0.15
CLN6-212ENST00000636020 NUDT2P50583 147 aa14.09□□□□□ -0.15
CLN6-212ENST00000636020 SRSF7Q16629 238 aaKnown RBP eCLIP14.09□□□□□ -0.15
CLN6-212ENST00000636020 ZSCAN26Q16670 478 aa14.09□□□□□ -0.15
CLN6-212ENST00000636020 TMEM42Q69YG0 159 aa14.09□□□□□ -0.15
CLN6-212ENST00000636020 Q8N1Y9 231 aa14.09□□□□□ -0.15
CLN6-212ENST00000636020 OR1N2Q8NGR9 330 aa14.09□□□□□ -0.15
CLN6-212ENST00000636020 RP9Q8TA86 221 aaKnown RBP14.09□□□□□ -0.15
CLN6-212ENST00000636020 LINC00476Q8WZB0 136 aa14.09□□□□□ -0.15
CLN6-212ENST00000636020 RPEQ96AT9 228 aa14.09□□□□□ -0.15
CLN6-212ENST00000636020 PKIBQ9C010 78 aa14.09□□□□□ -0.15
CLN6-212ENST00000636020 MED20Q9H944 212 aa14.09□□□□□ -0.15
CLN6-212ENST00000636020 GPR84Q9NQS5 396 aa14.09□□□□□ -0.15
CLN6-212ENST00000636020 GPR173Q9NS66 373 aa14.09□□□□□ -0.15
CLN6-212ENST00000636020 MTCH1Q9NZJ7 389 aa14.09□□□□□ -0.15
CLN6-212ENST00000636020 ACOD1A6NK06 481 aa14.08□□□□□ -0.16
CLN6-212ENST00000636020 MGST3O14880 152 aa14.08□□□□□ -0.16
CLN6-212ENST00000636020 SAP30O75446 220 aa14.08□□□□□ -0.16
CLN6-212ENST00000636020 IGHG4P01861 327 aa14.08□□□□□ -0.16
CLN6-212ENST00000636020 IFNA6P05013 189 aa14.08□□□□□ -0.16
CLN6-212ENST00000636020 GABRR1P24046 479 aa14.08□□□□□ -0.16
CLN6-212ENST00000636020 POU3F4P49335 361 aa14.08□□□□□ -0.16
CLN6-212ENST00000636020 P2RX3P56373 397 aa14.08□□□□□ -0.16
CLN6-212ENST00000636020 CFHR3Q02985 330 aa14.08□□□□□ -0.16
CLN6-212ENST00000636020 RBM39Q14498 530 aaKnown RBP14.08□□□□□ -0.16
CLN6-212ENST00000636020 CLVS2Q5SYC1 327 aa14.08□□□□□ -0.16
CLN6-212ENST00000636020 UTF1Q5T230 341 aa14.08□□□□□ -0.16
CLN6-212ENST00000636020 SLX4IPQ5VYV7 408 aa14.08□□□□□ -0.16
CLN6-212ENST00000636020 COMMD2Q86X83 199 aa14.08□□□□□ -0.16
CLN6-212ENST00000636020 RNF148Q8N7C7 305 aa14.08□□□□□ -0.16
CLN6-212ENST00000636020 ZNF454Q8N9F8 522 aa14.08□□□□□ -0.16
CLN6-212ENST00000636020 OR51E1Q8TCB6 317 aa14.08□□□□□ -0.16
CLN6-212ENST00000636020 DCUN1D4Q92564 292 aa14.08□□□□□ -0.16
CLN6-212ENST00000636020 CORO2AQ92828 525 aa14.08□□□□□ -0.16
CLN6-212ENST00000636020 TOMM40LQ969M1 308 aa14.08□□□□□ -0.16
CLN6-212ENST00000636020 RCN3Q96D15 328 aa14.08□□□□□ -0.16
CLN6-212ENST00000636020 TEAD3Q99594 435 aa14.08□□□□□ -0.16
CLN6-212ENST00000636020 TSSK6Q9BXA6 273 aa14.08□□□□□ -0.16
CLN6-212ENST00000636020 MRGBPQ9NV56 204 aa14.08□□□□□ -0.16
CLN6-212ENST00000636020 FAM206AQ9NX38 181 aa14.08□□□□□ -0.16
CLN6-212ENST00000636020 KLHDC2Q9Y2U9 406 aa14.08□□□□□ -0.16
CLN6-212ENST00000636020 TNCP24821 2201 aa14.08□□□□□ -0.16
CLN6-212ENST00000636020 A0A087X0M5 115 aa14.07□□□□□ -0.16
CLN6-212ENST00000636020 A0A1B0GX30 115 aa14.07□□□□□ -0.16
CLN6-212ENST00000636020 A0A1W2PPI3 338 aa14.07□□□□□ -0.16
CLN6-212ENST00000636020 I3L521 148 aa14.07□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms