RNA–Protein interactions for RNA: ENST00000634363.1

SNRNP48-203, Transcript of small nuclear ribonucleoprotein U11/U12 subunit 48, humanhuman

TSL 2

Gene SNRNP48, Length 781 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP48-203ENST00000634363 IGKV1-27A0A075B6S5 117 aa12.79□□□□□ -0.36
SNRNP48-203ENST00000634363 DVL1O14640 695 aa12.79□□□□□ -0.36
SNRNP48-203ENST00000634363 DENRO43583 198 aaKnown RBP12.79□□□□□ -0.36
SNRNP48-203ENST00000634363 NXPH2O95156 264 aa12.79□□□□□ -0.36
SNRNP48-203ENST00000634363 MT-ND2P03891 347 aa12.79□□□□□ -0.36
SNRNP48-203ENST00000634363 HCKP08631 526 aa12.79□□□□□ -0.36
SNRNP48-203ENST00000634363 PGA5P0DJD9 388 aa12.79□□□□□ -0.36
SNRNP48-203ENST00000634363 RAB3AP20336 220 aa12.79□□□□□ -0.36
SNRNP48-203ENST00000634363 IER3P46695 156 aa12.79□□□□□ -0.36
SNRNP48-203ENST00000634363 POU3F4P49335 361 aa12.79□□□□□ -0.36
SNRNP48-203ENST00000634363 PPP3R1P63098 170 aa12.79□□□□□ -0.36
SNRNP48-203ENST00000634363 STUMQ69YW2 141 aa12.79□□□□□ -0.36
SNRNP48-203ENST00000634363 SLC25A26Q70HW3 274 aa12.79□□□□□ -0.36
SNRNP48-203ENST00000634363 PRSS48Q7RTY5 328 aa12.79□□□□□ -0.36
SNRNP48-203ENST00000634363 OR5T2Q8NGG2 359 aa12.79□□□□□ -0.36
SNRNP48-203ENST00000634363 ST8SIA4Q92187 359 aa12.79□□□□□ -0.36
SNRNP48-203ENST00000634363 CPNE2Q96FN4 548 aaPredicted RBP12.79□□□□□ -0.36
SNRNP48-203ENST00000634363 PGLYRP3Q96LB9 341 aa12.79□□□□□ -0.36
SNRNP48-203ENST00000634363 ZNF488Q96MN9 340 aa12.79□□□□□ -0.36
SNRNP48-203ENST00000634363 SIRPDQ9H106 197 aa12.79□□□□□ -0.36
SNRNP48-203ENST00000634363 DNTTIP1Q9H147 329 aa12.79□□□□□ -0.36
SNRNP48-203ENST00000634363 VWFP04275 2813 aa12.79□□□□□ -0.36
SNRNP48-203ENST00000634363 OR2AT4A6NND4 320 aa12.78□□□□□ -0.36
SNRNP48-203ENST00000634363 MAGEB3O15480 346 aa12.78□□□□□ -0.36
SNRNP48-203ENST00000634363 NOS1APO75052 506 aaPredicted RBP12.78□□□□□ -0.36
SNRNP48-203ENST00000634363 ALX3O95076 343 aa12.78□□□□□ -0.36
SNRNP48-203ENST00000634363 TSPAN15O95858 294 aa12.78□□□□□ -0.36
SNRNP48-203ENST00000634363 GABRA2P47869 451 aa12.78□□□□□ -0.36
SNRNP48-203ENST00000634363 RPL15P61313 204 aaKnown RBP12.78□□□□□ -0.36
SNRNP48-203ENST00000634363 ACSM1Q08AH1 577 aa12.78□□□□□ -0.36
SNRNP48-203ENST00000634363 IRF3Q14653 427 aa12.78□□□□□ -0.36
SNRNP48-203ENST00000634363 Q499Y3 187 aa12.78□□□□□ -0.36
SNRNP48-203ENST00000634363 ACP7Q6ZNF0 438 aa12.78□□□□□ -0.36
SNRNP48-203ENST00000634363 MKXQ8IYA7 352 aa12.78□□□□□ -0.36
SNRNP48-203ENST00000634363 OR13C5Q8NGS8 318 aa12.78□□□□□ -0.36
SNRNP48-203ENST00000634363 THRSPQ92748 146 aa12.78□□□□□ -0.36
SNRNP48-203ENST00000634363 SLAMF9Q96A28 289 aa12.78□□□□□ -0.36
SNRNP48-203ENST00000634363 CEP19Q96LK0 163 aa12.78□□□□□ -0.36
SNRNP48-203ENST00000634363 OR5M11Q96RB7 305 aa12.78□□□□□ -0.36
SNRNP48-203ENST00000634363 CCL13Q99616 98 aa12.78□□□□□ -0.36
SNRNP48-203ENST00000634363 NRIP2Q9BQI9 281 aa12.78□□□□□ -0.36
SNRNP48-203ENST00000634363 DPAGT1Q9H3H5 408 aa12.78□□□□□ -0.36
SNRNP48-203ENST00000634363 CNTD2Q9H8S5 307 aa12.78□□□□□ -0.36
SNRNP48-203ENST00000634363 TAS2R4Q9NYW5 299 aa12.78□□□□□ -0.36
SNRNP48-203ENST00000634363 KAAG1Q9UBP8 84 aa12.78□□□□□ -0.36
SNRNP48-203ENST00000634363 CKLFQ9UBR5 152 aa12.78□□□□□ -0.36
SNRNP48-203ENST00000634363 NDUFB3O43676 98 aa12.77□□□□□ -0.37
SNRNP48-203ENST00000634363 CLPXO76031 633 aa12.77□□□□□ -0.37
SNRNP48-203ENST00000634363 CD1AP06126 327 aa12.77□□□□□ -0.37
SNRNP48-203ENST00000634363 HSMCR30P0CW71 290 aa12.77□□□□□ -0.37
SNRNP48-203ENST00000634363 PROK1P58294 105 aa12.77□□□□□ -0.37
SNRNP48-203ENST00000634363 GABARAPL2P60520 117 aa12.77□□□□□ -0.37
SNRNP48-203ENST00000634363 PRB3Q04118 309 aaPredicted RBP12.77□□□□□ -0.37
SNRNP48-203ENST00000634363 IKZF1Q13422 519 aa12.77□□□□□ -0.37
SNRNP48-203ENST00000634363 LRRC10Q5BKY1 277 aa12.77□□□□□ -0.37
SNRNP48-203ENST00000634363 VMO1Q7Z5L0 202 aa12.77□□□□□ -0.37
SNRNP48-203ENST00000634363 Q8IYB0 196 aa12.77□□□□□ -0.37
SNRNP48-203ENST00000634363 BATF2Q8N1L9 274 aa12.77□□□□□ -0.37
SNRNP48-203ENST00000634363 PIP4P2Q8N4L2 257 aa12.77□□□□□ -0.37
SNRNP48-203ENST00000634363 FAM216BQ8N7L0 139 aa12.77□□□□□ -0.37
SNRNP48-203ENST00000634363 ANGPTL6Q8NI99 470 aa12.77□□□□□ -0.37
SNRNP48-203ENST00000634363 RFT1Q96AA3 541 aa12.77□□□□□ -0.37
SNRNP48-203ENST00000634363 MED30Q96HR3 178 aa12.77□□□□□ -0.37
SNRNP48-203ENST00000634363 ONECUT1Q9UBC0 465 aa12.77□□□□□ -0.37
SNRNP48-203ENST00000634363 LSM2Q9Y333 95 aaKnown RBP12.77□□□□□ -0.37
SNRNP48-203ENST00000634363 TRBV5-5A0A0J9YX44 114 aa12.76□□□□□ -0.37
SNRNP48-203ENST00000634363 A0A1W2PRD5 423 aa12.76□□□□□ -0.37
SNRNP48-203ENST00000634363 A0A1W2PRF3 423 aa12.76□□□□□ -0.37
SNRNP48-203ENST00000634363 A0A1W2PRM7 423 aa12.76□□□□□ -0.37
SNRNP48-203ENST00000634363 FCN3O75636 299 aa12.76□□□□□ -0.37
SNRNP48-203ENST00000634363 INMTO95050 263 aa12.76□□□□□ -0.37
SNRNP48-203ENST00000634363 ACAA1P09110 424 aaPredicted RBP12.76□□□□□ -0.37
SNRNP48-203ENST00000634363 PSG2P11465 335 aa12.76□□□□□ -0.37
SNRNP48-203ENST00000634363 MAPK3P27361 379 aaPredicted RBP12.76□□□□□ -0.37
SNRNP48-203ENST00000634363 ATPAF1Q5TC12 328 aaPredicted RBP12.76□□□□□ -0.37
SNRNP48-203ENST00000634363 GDPGP1Q6ZNW5 385 aa12.76□□□□□ -0.37
SNRNP48-203ENST00000634363 Q6ZSV7 163 aa12.76□□□□□ -0.37
SNRNP48-203ENST00000634363 FGFRL1Q8N441 504 aa12.76□□□□□ -0.37
SNRNP48-203ENST00000634363 OR5D18Q8NGL1 313 aa12.76□□□□□ -0.37
SNRNP48-203ENST00000634363 UFD1Q92890 307 aa12.76□□□□□ -0.37
SNRNP48-203ENST00000634363 SPACA5Q96QH8 159 aa12.76□□□□□ -0.37
SNRNP48-203ENST00000634363 OR14A2Q96R54 314 aa12.76□□□□□ -0.37
SNRNP48-203ENST00000634363 GPER1Q99527 375 aa12.76□□□□□ -0.37
SNRNP48-203ENST00000634363 MTCH1Q9NZJ7 389 aa12.76□□□□□ -0.37
SNRNP48-203ENST00000634363 RPUSD1Q9UJJ7 312 aaKnown RBP12.76□□□□□ -0.37
SNRNP48-203ENST00000634363 IGKV1D-17A0A075B6S4 117 aa12.75□□□□□ -0.37
SNRNP48-203ENST00000634363 BTBD17A6NE02 478 aa12.75□□□□□ -0.37
SNRNP48-203ENST00000634363 RFPL4AA6NLU0 287 aa12.75□□□□□ -0.37
SNRNP48-203ENST00000634363 RFPL4AL1F8VTS6 287 aa12.75□□□□□ -0.37
SNRNP48-203ENST00000634363 ECDO95905 644 aaPredicted RBP12.75□□□□□ -0.37
SNRNP48-203ENST00000634363 ERVK11-1P61568 191 aa12.75□□□□□ -0.37
SNRNP48-203ENST00000634363 RPS11P62280 158 aaKnown RBP eCLIP12.75□□□□□ -0.37
SNRNP48-203ENST00000634363 PDZK1IP1Q13113 114 aa12.75□□□□□ -0.37
SNRNP48-203ENST00000634363 DOC2BQ14184 412 aa12.75□□□□□ -0.37
SNRNP48-203ENST00000634363 KISS1Q15726 138 aa12.75□□□□□ -0.37
SNRNP48-203ENST00000634363 TBCEQ15813 527 aaPredicted RBP12.75□□□□□ -0.37
SNRNP48-203ENST00000634363 DHRS7BQ6IAN0 325 aaPredicted RBP12.75□□□□□ -0.37
SNRNP48-203ENST00000634363 ZNF529Q6P280 563 aa12.75□□□□□ -0.37
SNRNP48-203ENST00000634363 ZNF788Q6ZQV5 615 aa12.75□□□□□ -0.37
SNRNP48-203ENST00000634363 LDLRAD3Q86YD5 345 aa12.75□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms