RNA–Protein interactions for RNA: ENST00000627371.1

PTCD3-220, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 5 BASIC

Gene PTCD3, Length 210 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-220ENST00000627371 PSMB9P28065 219 aa16.82■□□□□ 0.28
PTCD3-220ENST00000627371 PTGFRP43088 359 aa16.82■□□□□ 0.28
PTCD3-220ENST00000627371 CAV3P56539 151 aa16.82■□□□□ 0.28
PTCD3-220ENST00000627371 FABP5Q01469 135 aa16.82■□□□□ 0.28
PTCD3-220ENST00000627371 ZNF146Q15072 292 aa16.82■□□□□ 0.28
PTCD3-220ENST00000627371 CHRFAM7AQ494W8 412 aa16.82■□□□□ 0.28
PTCD3-220ENST00000627371 SPIN3Q5JUX0 258 aa16.82■□□□□ 0.28
PTCD3-220ENST00000627371 ASCL4Q6XD76 172 aa16.82■□□□□ 0.28
PTCD3-220ENST00000627371 BTN2A1Q7KYR7 527 aa16.82■□□□□ 0.28
PTCD3-220ENST00000627371 C1QL2Q7Z5L3 287 aa16.82■□□□□ 0.28
PTCD3-220ENST00000627371 TMEM185AQ8NFB2 350 aa16.82■□□□□ 0.28
PTCD3-220ENST00000627371 NUDT16L1Q9BRJ7 211 aaKnown RBP16.82■□□□□ 0.28
PTCD3-220ENST00000627371 PPIL3Q9H2H8 161 aaKnown RBP16.82■□□□□ 0.28
PTCD3-220ENST00000627371 C7orf69Q9H7B7 122 aa16.82■□□□□ 0.28
PTCD3-220ENST00000627371 TCF7L1Q9HCS4 588 aa16.82■□□□□ 0.28
PTCD3-220ENST00000627371 METRNQ9UJH8 293 aa16.82■□□□□ 0.28
PTCD3-220ENST00000627371 KIR2DS1A0A191URI9 304 aa16.81■□□□□ 0.28
PTCD3-220ENST00000627371 MEGF11A6BM72 1044 aa16.81■□□□□ 0.28
PTCD3-220ENST00000627371 CCRL2O00421 344 aa16.81■□□□□ 0.28
PTCD3-220ENST00000627371 CHRM2P08172 466 aa16.81■□□□□ 0.28
PTCD3-220ENST00000627371 MTNR1BP49286 362 aa16.81■□□□□ 0.28
PTCD3-220ENST00000627371 BMXP51813 675 aa16.81■□□□□ 0.28
PTCD3-220ENST00000627371 PAX8Q06710 450 aa16.81■□□□□ 0.28
PTCD3-220ENST00000627371 ELP2Q6IA86 826 aa16.81■□□□□ 0.28
PTCD3-220ENST00000627371 IL17RELQ6ZVW7 336 aa16.81■□□□□ 0.28
PTCD3-220ENST00000627371 LYPD6Q86Y78 171 aa16.81■□□□□ 0.28
PTCD3-220ENST00000627371 JAGN1Q8N5M9 183 aa16.81■□□□□ 0.28
PTCD3-220ENST00000627371 BEX2Q9BXY8 128 aa16.81■□□□□ 0.28
PTCD3-220ENST00000627371 ZNF696Q9H7X3 374 aa16.81■□□□□ 0.28
PTCD3-220ENST00000627371 RPUSD1Q9UJJ7 312 aaKnown RBP16.81■□□□□ 0.28
PTCD3-220ENST00000627371 NAV3Q8IVL0 2385 aa16.81■□□□□ 0.28
PTCD3-220ENST00000627371 ARL6IP5O75915 188 aa16.8■□□□□ 0.28
PTCD3-220ENST00000627371 HAND1O96004 215 aa16.8■□□□□ 0.28
PTCD3-220ENST00000627371 AVPP01185 164 aa16.8■□□□□ 0.28
PTCD3-220ENST00000627371 CALCBP10092 127 aa16.8■□□□□ 0.28
PTCD3-220ENST00000627371 SRMP19623 302 aa16.8■□□□□ 0.28
PTCD3-220ENST00000627371 FGF12P61328 243 aa16.8■□□□□ 0.28
PTCD3-220ENST00000627371 COL10A1Q03692 680 aa16.8■□□□□ 0.28
PTCD3-220ENST00000627371 RSU1Q15404 277 aa16.8■□□□□ 0.28
PTCD3-220ENST00000627371 CD200R1LQ6Q8B3 271 aa16.8■□□□□ 0.28
PTCD3-220ENST00000627371 C1orf229Q6ZS94 237 aaPredicted RBP16.8■□□□□ 0.28
PTCD3-220ENST00000627371 LRRTM1Q86UE6 522 aa16.8■□□□□ 0.28
PTCD3-220ENST00000627371 DCTN5Q9BTE1 182 aa16.8■□□□□ 0.28
PTCD3-220ENST00000627371 MRI1Q9BV20 369 aa16.8■□□□□ 0.28
PTCD3-220ENST00000627371 FAM234AQ9H0X4 552 aa16.8■□□□□ 0.28
PTCD3-220ENST00000627371 CNTD2Q9H8S5 307 aa16.8■□□□□ 0.28
PTCD3-220ENST00000627371 ELL3Q9HB65 397 aaPredicted RBP16.8■□□□□ 0.28
PTCD3-220ENST00000627371 IL36GQ9NZH8 169 aa16.8■□□□□ 0.28
PTCD3-220ENST00000627371 OPN4Q9UHM6 478 aa16.8■□□□□ 0.28
PTCD3-220ENST00000627371 GLS2Q9UI32 602 aa16.8■□□□□ 0.28
PTCD3-220ENST00000627371 NF1P21359 2839 aa16.8■□□□□ 0.28
PTCD3-220ENST00000627371 C2CD3Q4AC94 2353 aa16.79■□□□□ 0.28
PTCD3-220ENST00000627371 A0A087WXM4 84 aa16.79■□□□□ 0.28
PTCD3-220ENST00000627371 CDRT1O95170 752 aa16.79■□□□□ 0.28
PTCD3-220ENST00000627371 LIPFP07098 398 aa16.79■□□□□ 0.28
PTCD3-220ENST00000627371 NDUFB7P17568 137 aa16.79■□□□□ 0.28
PTCD3-220ENST00000627371 ADRA2CP18825 462 aa16.79■□□□□ 0.28
PTCD3-220ENST00000627371 CAPZA1P52907 286 aa16.79■□□□□ 0.28
PTCD3-220ENST00000627371 SNU13P55769 128 aaKnown RBP16.79■□□□□ 0.28
PTCD3-220ENST00000627371 SYT6Q5T7P8 510 aaPredicted RBP16.79■□□□□ 0.28
PTCD3-220ENST00000627371 TEX29Q8N6K0 151 aa16.79■□□□□ 0.28
PTCD3-220ENST00000627371 Q8NFD4 153 aa16.79■□□□□ 0.28
PTCD3-220ENST00000627371 TSPAN14Q8NG11 270 aa16.79■□□□□ 0.28
PTCD3-220ENST00000627371 C8orf46Q8TAG6 207 aa16.79■□□□□ 0.28
PTCD3-220ENST00000627371 S100A13Q99584 98 aa16.79■□□□□ 0.28
PTCD3-220ENST00000627371 UQCC2Q9BRT2 126 aa16.79■□□□□ 0.28
PTCD3-220ENST00000627371 SLITRK2Q9H156 845 aa16.79■□□□□ 0.28
PTCD3-220ENST00000627371 METTL9Q9H1A3 318 aa16.79■□□□□ 0.28
PTCD3-220ENST00000627371 GSTK1Q9Y2Q3 226 aa16.79■□□□□ 0.28
PTCD3-220ENST00000627371 AUP1Q9Y679 476 aa16.79■□□□□ 0.28
PTCD3-220ENST00000627371 K7N7A8 449 aa16.78■□□□□ 0.28
PTCD3-220ENST00000627371 ZNF737O75373 536 aa16.78■□□□□ 0.28
PTCD3-220ENST00000627371 TK1P04183 234 aa16.78■□□□□ 0.28
PTCD3-220ENST00000627371 GALP22466 123 aa16.78■□□□□ 0.28
PTCD3-220ENST00000627371 DUSP1P28562 367 aa16.78■□□□□ 0.28
PTCD3-220ENST00000627371 NEDD8Q15843 81 aa16.78■□□□□ 0.28
PTCD3-220ENST00000627371 ASCC1Q8N9N2 400 aaKnown RBP16.78■□□□□ 0.28
PTCD3-220ENST00000627371 LY6G5BQ8NDX9 201 aa16.78■□□□□ 0.28
PTCD3-220ENST00000627371 OR10K1Q8NGX5 313 aa16.78■□□□□ 0.28
PTCD3-220ENST00000627371 H1FXQ92522 213 aaKnown RBP16.78■□□□□ 0.28
PTCD3-220ENST00000627371 MUL1Q969V5 352 aa16.78■□□□□ 0.28
PTCD3-220ENST00000627371 DMRTB1Q96MA1 342 aa16.78■□□□□ 0.28
PTCD3-220ENST00000627371 EXOSC4Q9NPD3 245 aaKnown RBP16.78■□□□□ 0.28
PTCD3-220ENST00000627371 ING4Q9UNL4 249 aa16.78■□□□□ 0.28
PTCD3-220ENST00000627371 MRPS28Q9Y2Q9 187 aaKnown RBP16.78■□□□□ 0.28
PTCD3-220ENST00000627371 TRDV1A0A1B0GX56 115 aa16.77■□□□□ 0.28
PTCD3-220ENST00000627371 SH2D1BO14796 132 aa16.77■□□□□ 0.28
PTCD3-220ENST00000627371 ZNF780AO75290 641 aaPredicted RBP16.77■□□□□ 0.28
PTCD3-220ENST00000627371 PPIAL4GP0DN37 164 aa16.77■□□□□ 0.28
PTCD3-220ENST00000627371 HOXB4P17483 251 aaPredicted RBP16.77■□□□□ 0.28
PTCD3-220ENST00000627371 SRD5A1P18405 259 aa16.77■□□□□ 0.28
PTCD3-220ENST00000627371 CALRP27797 417 aaKnown RBP16.77■□□□□ 0.28
PTCD3-220ENST00000627371 GLT8D1Q68CQ7 371 aa16.77■□□□□ 0.28
PTCD3-220ENST00000627371 OR4D6Q8NGJ1 314 aa16.77■□□□□ 0.28
PTCD3-220ENST00000627371 OR51T1Q8NGJ9 327 aa16.77■□□□□ 0.28
PTCD3-220ENST00000627371 FOXRED1Q96CU9 486 aaPredicted RBP16.77■□□□□ 0.28
PTCD3-220ENST00000627371 SNX22Q96L94 193 aa16.77■□□□□ 0.28
PTCD3-220ENST00000627371 MXRA5Q9NR99 2828 aa16.77■□□□□ 0.27
PTCD3-220ENST00000627371 CUBNO60494 3623 aa16.77■□□□□ 0.27
PTCD3-220ENST00000627371 TRBV23-1A0A0A0MS06 115 aa16.76■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 59.5 ms