RNA–Protein interactions for RNA: ENST00000623007.3

LDB3-208, Transcript of LIM domain binding 3, humanhuman

TSL 1 (best) BASIC

Gene LDB3, Length 1,664 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB3-208ENST00000623007 KIR2DS1A0A191URI9 304 aa14□□□□□ -0.17
LDB3-208ENST00000623007 GOSR2O14653 212 aa14□□□□□ -0.17
LDB3-208ENST00000623007 BCL3P20749 454 aa14□□□□□ -0.17
LDB3-208ENST00000623007 KITLGP21583 273 aa14□□□□□ -0.17
LDB3-208ENST00000623007 GCH1P30793 250 aa14□□□□□ -0.17
LDB3-208ENST00000623007 MDH2P40926 338 aaKnown RBP14□□□□□ -0.17
LDB3-208ENST00000623007 GLP1RP43220 463 aa14□□□□□ -0.17
LDB3-208ENST00000623007 KIR2DS4P43632 304 aa14□□□□□ -0.17
LDB3-208ENST00000623007 PRSS12P56730 875 aa14□□□□□ -0.17
LDB3-208ENST00000623007 KIR2DS1Q14954 304 aa14□□□□□ -0.17
LDB3-208ENST00000623007 MBNL2Q5VZF2 373 aaKnown RBP14□□□□□ -0.17
LDB3-208ENST00000623007 HAGHLQ6PII5 290 aaPredicted RBP14□□□□□ -0.17
LDB3-208ENST00000623007 DHRS11Q6UWP2 260 aa14□□□□□ -0.17
LDB3-208ENST00000623007 SEM1Q6ZVN7 128 aa14□□□□□ -0.17
LDB3-208ENST00000623007 OR5M8Q8NGP6 311 aa14□□□□□ -0.17
LDB3-208ENST00000623007 MARCH1Q8TCQ1 289 aa14□□□□□ -0.17
LDB3-208ENST00000623007 SLAMF9Q96A28 289 aa14□□□□□ -0.17
LDB3-208ENST00000623007 SULT4A1Q9BR01 284 aa14□□□□□ -0.17
LDB3-208ENST00000623007 TMEM100Q9NV29 134 aa14□□□□□ -0.17
LDB3-208ENST00000623007 TREM2Q9NZC2 230 aa14□□□□□ -0.17
LDB3-208ENST00000623007 COMMD9Q9P000 198 aa14□□□□□ -0.17
LDB3-208ENST00000623007 PIPOXQ9P0Z9 390 aa14□□□□□ -0.17
LDB3-208ENST00000623007 FAM215AQ9Y5M1 114 aa14□□□□□ -0.17
LDB3-208ENST00000623007 FAM186AA6NE01 2351 aa13.99□□□□□ -0.17
LDB3-208ENST00000623007 PPP3CBP16298 524 aa13.99□□□□□ -0.17
LDB3-208ENST00000623007 CA6P23280 308 aa13.99□□□□□ -0.17
LDB3-208ENST00000623007 CALCRP30988 508 aa13.99□□□□□ -0.17
LDB3-208ENST00000623007 FAM58AQ8N1B3 248 aa13.99□□□□□ -0.17
LDB3-208ENST00000623007 UXS1Q8NBZ7 420 aa13.99□□□□□ -0.17
LDB3-208ENST00000623007 BHLHE23Q8NDY6 225 aa13.99□□□□□ -0.17
LDB3-208ENST00000623007 OR8G5Q8NG78 346 aa13.99□□□□□ -0.17
LDB3-208ENST00000623007 MARS2Q96GW9 593 aaKnown RBP13.99□□□□□ -0.17
LDB3-208ENST00000623007 ADAT1Q9BUB4 502 aaKnown RBP13.99□□□□□ -0.17
LDB3-208ENST00000623007 ELOVL5Q9NYP7 299 aa13.99□□□□□ -0.17
LDB3-208ENST00000623007 MTCH1Q9NZJ7 389 aa13.99□□□□□ -0.17
LDB3-208ENST00000623007 GLS2Q9UI32 602 aa13.99□□□□□ -0.17
LDB3-208ENST00000623007 TP53TG5Q9Y2B4 290 aa13.99□□□□□ -0.17
LDB3-208ENST00000623007 SLC25A15Q9Y619 301 aa13.99□□□□□ -0.17
LDB3-208ENST00000623007 PIGBOS1A0A0B4J2F0 54 aa13.98□□□□□ -0.17
LDB3-208ENST00000623007 CD8AP01732 235 aa13.98□□□□□ -0.17
LDB3-208ENST00000623007 CTSDP07339 412 aaPredicted RBP13.98□□□□□ -0.17
LDB3-208ENST00000623007 CECR9P0C854 216 aa13.98□□□□□ -0.17
LDB3-208ENST00000623007 OR5H8P0DN80 308 aa13.98□□□□□ -0.17
LDB3-208ENST00000623007 UCP3P55916 312 aa13.98□□□□□ -0.17
LDB3-208ENST00000623007 PPP1R1AQ13522 171 aa13.98□□□□□ -0.17
LDB3-208ENST00000623007 OR8G1Q15617 311 aa13.98□□□□□ -0.17
LDB3-208ENST00000623007 SPIN3Q5JUX0 258 aa13.98□□□□□ -0.17
LDB3-208ENST00000623007 KLF14Q8TD94 323 aaPredicted RBP13.98□□□□□ -0.17
LDB3-208ENST00000623007 MRGPRFQ96AM1 343 aa13.98□□□□□ -0.17
LDB3-208ENST00000623007 CHIAQ9BZP6 476 aa13.98□□□□□ -0.17
LDB3-208ENST00000623007 OPN3Q9H1Y3 402 aaPredicted RBP13.98□□□□□ -0.17
LDB3-208ENST00000623007 CA10Q9NS85 328 aa13.98□□□□□ -0.17
LDB3-208ENST00000623007 ZNF629Q9UEG4 869 aaPredicted RBP13.98□□□□□ -0.17
LDB3-208ENST00000623007 RIF1Q5UIP0 2472 aaKnown RBP13.98□□□□□ -0.17
LDB3-208ENST00000623007 TRBV6-6A0A0A6YYG2 114 aa13.98□□□□□ -0.17
LDB3-208ENST00000623007 SFT2D2O95562 160 aa13.98□□□□□ -0.17
LDB3-208ENST00000623007 CELA3BP08861 270 aa13.98□□□□□ -0.17
LDB3-208ENST00000623007 AKR1C4P17516 323 aa13.98□□□□□ -0.17
LDB3-208ENST00000623007 NFYAP23511 347 aaPredicted RBP13.98□□□□□ -0.17
LDB3-208ENST00000623007 VAMP1P23763 118 aa13.98□□□□□ -0.17
LDB3-208ENST00000623007 NPBWR2P48146 333 aa13.98□□□□□ -0.17
LDB3-208ENST00000623007 RPS23P62266 143 aaKnown RBP13.98□□□□□ -0.17
LDB3-208ENST00000623007 AADACL3Q5VUY0 350 aa13.98□□□□□ -0.17
LDB3-208ENST00000623007 SHEQ5VZ18 495 aa13.98□□□□□ -0.17
LDB3-208ENST00000623007 LAMTOR1Q6IAA8 161 aa13.98□□□□□ -0.17
LDB3-208ENST00000623007 MRGPRGQ86SM5 289 aa13.98□□□□□ -0.17
LDB3-208ENST00000623007 OR13G1Q8NGZ3 307 aa13.98□□□□□ -0.17
LDB3-208ENST00000623007 EXTL1Q92935 676 aa13.98□□□□□ -0.17
LDB3-208ENST00000623007 RAB18Q9NP72 206 aa13.98□□□□□ -0.17
LDB3-208ENST00000623007 ZNF230Q9UIE0 474 aaPredicted RBP13.98□□□□□ -0.17
LDB3-208ENST00000623007 PURGQ9UJV8 347 aaKnown RBP13.98□□□□□ -0.17
LDB3-208ENST00000623007 SMLR1H3BR10 107 aa13.97□□□□□ -0.17
LDB3-208ENST00000623007 NOS1APO75052 506 aaPredicted RBP13.97□□□□□ -0.17
LDB3-208ENST00000623007 WISP2O76076 250 aa13.97□□□□□ -0.17
LDB3-208ENST00000623007 TOXO94900 526 aa13.97□□□□□ -0.17
LDB3-208ENST00000623007 TDGF1P3P51864 188 aa13.97□□□□□ -0.17
LDB3-208ENST00000623007 PSG7Q13046 419 aa13.97□□□□□ -0.17
LDB3-208ENST00000623007 IKZF1Q13422 519 aa13.97□□□□□ -0.17
LDB3-208ENST00000623007 MOB1BQ7L9L4 216 aa13.97□□□□□ -0.17
LDB3-208ENST00000623007 PIK3IP1Q96FE7 263 aa13.97□□□□□ -0.17
LDB3-208ENST00000623007 FAM210AQ96ND0 272 aa13.97□□□□□ -0.17
LDB3-208ENST00000623007 SYT3Q9BQG1 590 aa13.97□□□□□ -0.17
LDB3-208ENST00000623007 ZNF2Q9BSG1 426 aaPredicted RBP13.97□□□□□ -0.17
LDB3-208ENST00000623007 PDCD10Q9BUL8 212 aa13.97□□□□□ -0.17
LDB3-208ENST00000623007 CXXC4Q9H2H0 198 aa13.97□□□□□ -0.17
LDB3-208ENST00000623007 OR51B6Q9H340 312 aa13.97□□□□□ -0.17
LDB3-208ENST00000623007 C5orf66Q9H5L9 145 aa13.97□□□□□ -0.17
LDB3-208ENST00000623007 CHMP1AQ9HD42 196 aaPredicted RBP13.97□□□□□ -0.17
LDB3-208ENST00000623007 RTTNQ86VV8 2226 aa13.97□□□□□ -0.17
LDB3-208ENST00000623007 RFPL4AA6NLU0 287 aa13.96□□□□□ -0.17
LDB3-208ENST00000623007 RFPL4AL1F8VTS6 287 aa13.96□□□□□ -0.17
LDB3-208ENST00000623007 ATP6V1G1O75348 118 aa13.96□□□□□ -0.17
LDB3-208ENST00000623007 PGAM2P15259 253 aa13.96□□□□□ -0.17
LDB3-208ENST00000623007 PRKACAP17612 351 aa13.96□□□□□ -0.17
LDB3-208ENST00000623007 NPY4RP50391 375 aa13.96□□□□□ -0.17
LDB3-208ENST00000623007 H2BFSP57053 126 aa13.96□□□□□ -0.17
LDB3-208ENST00000623007 SGPP2Q8IWX5 399 aa13.96□□□□□ -0.17
LDB3-208ENST00000623007 FAM185AQ8N0U4 392 aa13.96□□□□□ -0.17
LDB3-208ENST00000623007 FGF23Q9GZV9 251 aaPredicted RBP13.96□□□□□ -0.17
LDB3-208ENST00000623007 PLSCR3Q9NRY6 295 aa13.96□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 58.3 ms