RNA–Protein interactions for RNA: ENST00000622836.1

PCDHGC3-208, Transcript of protocadherin gamma subfamily C, 3, humanhuman

TSL 3

Gene PCDHGC3, Length 795 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGC3-208ENST00000622836 RNF144BQ7Z419 303 aa11.51□□□□□ -0.57
PCDHGC3-208ENST00000622836 PHC2Q8IXK0 858 aa11.51□□□□□ -0.57
PCDHGC3-208ENST00000622836 ZSCAN4Q8NAM6 433 aaPredicted RBP11.51□□□□□ -0.57
PCDHGC3-208ENST00000622836 ZNF485Q8NCK3 441 aa11.51□□□□□ -0.57
PCDHGC3-208ENST00000622836 OR4M1Q8NGD0 313 aa11.51□□□□□ -0.57
PCDHGC3-208ENST00000622836 ZDHHC16Q969W1 377 aa11.51□□□□□ -0.57
PCDHGC3-208ENST00000622836 CCDC90BQ9GZT6 254 aa11.51□□□□□ -0.57
PCDHGC3-208ENST00000622836 FAM234AQ9H0X4 552 aa11.51□□□□□ -0.57
PCDHGC3-208ENST00000622836 IL36RNQ9UBH0 155 aa11.51□□□□□ -0.57
PCDHGC3-208ENST00000622836 GSTK1Q9Y2Q3 226 aa11.51□□□□□ -0.57
PCDHGC3-208ENST00000622836 IGKV1-12A0A0C4DH73 117 aa11.5□□□□□ -0.57
PCDHGC3-208ENST00000622836 CENPVL3A0A0U1RRI6 287 aa11.5□□□□□ -0.57
PCDHGC3-208ENST00000622836 K7N7A8 449 aa11.5□□□□□ -0.57
PCDHGC3-208ENST00000622836 SH2D1BO14796 132 aa11.5□□□□□ -0.57
PCDHGC3-208ENST00000622836 KDM4BO94953 1096 aa11.5□□□□□ -0.57
PCDHGC3-208ENST00000622836 IGKV1D-12P01611 117 aa11.5□□□□□ -0.57
PCDHGC3-208ENST00000622836 EEF1B2P24534 225 aaKnown RBP11.5□□□□□ -0.57
PCDHGC3-208ENST00000622836 BAMBIQ13145 260 aa11.5□□□□□ -0.57
PCDHGC3-208ENST00000622836 MED22Q15528 200 aa11.5□□□□□ -0.57
PCDHGC3-208ENST00000622836 SPIN3Q5JUX0 258 aa11.5□□□□□ -0.57
PCDHGC3-208ENST00000622836 C9orf139Q6ZV77 190 aa11.5□□□□□ -0.57
PCDHGC3-208ENST00000622836 SAXO1Q8IYX7 474 aa11.5□□□□□ -0.57
PCDHGC3-208ENST00000622836 OR52N4Q8NGI2 321 aa11.5□□□□□ -0.57
PCDHGC3-208ENST00000622836 OR51A2Q8NGJ7 313 aa11.5□□□□□ -0.57
PCDHGC3-208ENST00000622836 OR5D13Q8NGL4 314 aa11.5□□□□□ -0.57
PCDHGC3-208ENST00000622836 TBC1D15Q8TC07 691 aa11.5□□□□□ -0.57
PCDHGC3-208ENST00000622836 TNFAIP8L1Q8WVP5 186 aa11.5□□□□□ -0.57
PCDHGC3-208ENST00000622836 PGLYRP3Q96LB9 341 aa11.5□□□□□ -0.57
PCDHGC3-208ENST00000622836 DUX5Q96PT3 197 aa11.5□□□□□ -0.57
PCDHGC3-208ENST00000622836 OR14A2Q96R54 314 aa11.5□□□□□ -0.57
PCDHGC3-208ENST00000622836 METTL8Q9H825 291 aaKnown RBP11.5□□□□□ -0.57
PCDHGC3-208ENST00000622836 HMG20AQ9NP66 347 aa11.5□□□□□ -0.57
PCDHGC3-208ENST00000622836 EXOSC4Q9NPD3 245 aaKnown RBP11.5□□□□□ -0.57
PCDHGC3-208ENST00000622836 TMEM138Q9NPI0 162 aa11.5□□□□□ -0.57
PCDHGC3-208ENST00000622836 C19orf12Q9NSK7 152 aa11.5□□□□□ -0.57
PCDHGC3-208ENST00000622836 SOX21Q9Y651 276 aaPredicted RBP11.5□□□□□ -0.57
PCDHGC3-208ENST00000622836 IGHV1-69DA0A0B4J2H0 117 aa11.49□□□□□ -0.57
PCDHGC3-208ENST00000622836 TRBV5-5A0A0J9YX44 114 aa11.49□□□□□ -0.57
PCDHGC3-208ENST00000622836 hCG_1809904A0A1W2PP81 198 aa11.49□□□□□ -0.57
PCDHGC3-208ENST00000622836 A0A1W2PPE2 198 aa11.49□□□□□ -0.57
PCDHGC3-208ENST00000622836 A0A1W2PR64 198 aa11.49□□□□□ -0.57
PCDHGC3-208ENST00000622836 A0A1W2PRV1 198 aa11.49□□□□□ -0.57
PCDHGC3-208ENST00000622836 M0R1W7 72 aa11.49□□□□□ -0.57
PCDHGC3-208ENST00000622836 SIRPB1O00241 398 aa11.49□□□□□ -0.57
PCDHGC3-208ENST00000622836 RGS10O43665 173 aa11.49□□□□□ -0.57
PCDHGC3-208ENST00000622836 IGHV1-69P01742 117 aa11.49□□□□□ -0.57
PCDHGC3-208ENST00000622836 ZNF44P15621 663 aa11.49□□□□□ -0.57
PCDHGC3-208ENST00000622836 BDKRB2P30411 391 aa11.49□□□□□ -0.57
PCDHGC3-208ENST00000622836 ACTG1P63261 375 aa11.49□□□□□ -0.57
PCDHGC3-208ENST00000622836 GUCA2AQ02747 115 aa11.49□□□□□ -0.57
PCDHGC3-208ENST00000622836 PRB3Q04118 309 aaPredicted RBP11.49□□□□□ -0.57
PCDHGC3-208ENST00000622836 SCN1BQ07699 218 aa11.49□□□□□ -0.57
PCDHGC3-208ENST00000622836 EDDM3AQ14507 147 aa11.49□□□□□ -0.57
PCDHGC3-208ENST00000622836 GRK1Q15835 563 aa11.49□□□□□ -0.57
PCDHGC3-208ENST00000622836 DDI2Q5TDH0 399 aa11.49□□□□□ -0.57
PCDHGC3-208ENST00000622836 PPP1R35Q8TAP8 253 aa11.49□□□□□ -0.57
PCDHGC3-208ENST00000622836 ZFAND2BQ8WV99 257 aa11.49□□□□□ -0.57
PCDHGC3-208ENST00000622836 ORAI1Q96D31 301 aa11.49□□□□□ -0.57
PCDHGC3-208ENST00000622836 SNX22Q96L94 193 aa11.49□□□□□ -0.57
PCDHGC3-208ENST00000622836 S100A13Q99584 98 aa11.49□□□□□ -0.57
PCDHGC3-208ENST00000622836 CDCA4Q9BXL8 241 aa11.49□□□□□ -0.57
PCDHGC3-208ENST00000622836 CHST6Q9GZX3 395 aa11.49□□□□□ -0.57
PCDHGC3-208ENST00000622836 RHOFQ9HBH0 211 aa11.49□□□□□ -0.57
PCDHGC3-208ENST00000622836 PAK1IP1Q9NWT1 392 aaPredicted RBP11.49□□□□□ -0.57
PCDHGC3-208ENST00000622836 RAB26Q9ULW5 256 aa11.49□□□□□ -0.57
PCDHGC3-208ENST00000622836 MDFIC2A0A1B0GVS7 189 aa11.48□□□□□ -0.57
PCDHGC3-208ENST00000622836 A0A1W2PPK0 400 aa11.48□□□□□ -0.57
PCDHGC3-208ENST00000622836 A0A1W2PRD5 423 aa11.48□□□□□ -0.57
PCDHGC3-208ENST00000622836 A0A1W2PRF3 423 aa11.48□□□□□ -0.57
PCDHGC3-208ENST00000622836 A0A1W2PRM7 423 aa11.48□□□□□ -0.57
PCDHGC3-208ENST00000622836 DNAJC9-AS1A6NH13 148 aa11.48□□□□□ -0.57
PCDHGC3-208ENST00000622836 GABRPO00591 440 aa11.48□□□□□ -0.57
PCDHGC3-208ENST00000622836 MAPK3P27361 379 aaPredicted RBP11.48□□□□□ -0.57
PCDHGC3-208ENST00000622836 ZNF93P35789 620 aaPredicted RBP11.48□□□□□ -0.57
PCDHGC3-208ENST00000622836 BMXP51813 675 aa11.48□□□□□ -0.57
PCDHGC3-208ENST00000622836 ZP1P60852 638 aa11.48□□□□□ -0.57
PCDHGC3-208ENST00000622836 SLC35A2P78381 396 aa11.48□□□□□ -0.57
PCDHGC3-208ENST00000622836 BDH1Q02338 343 aa11.48□□□□□ -0.57
PCDHGC3-208ENST00000622836 ZNF146Q15072 292 aa11.48□□□□□ -0.57
PCDHGC3-208ENST00000622836 RSU1Q15404 277 aa11.48□□□□□ -0.57
PCDHGC3-208ENST00000622836 SPHARQ15513 63 aa11.48□□□□□ -0.57
PCDHGC3-208ENST00000622836 DEFB112Q30KQ8 113 aa11.48□□□□□ -0.57
PCDHGC3-208ENST00000622836 RNLSQ5VYX0 342 aa11.48□□□□□ -0.57
PCDHGC3-208ENST00000622836 NCR3LG1Q68D85 454 aa11.48□□□□□ -0.57
PCDHGC3-208ENST00000622836 TMEM200BQ69YZ2 307 aa11.48□□□□□ -0.57
PCDHGC3-208ENST00000622836 ASPHD2Q6ICH7 369 aa11.48□□□□□ -0.57
PCDHGC3-208ENST00000622836 ZNF529Q6P280 563 aa11.48□□□□□ -0.57
PCDHGC3-208ENST00000622836 C1orf122Q6ZSJ8 110 aa11.48□□□□□ -0.57
PCDHGC3-208ENST00000622836 OR8H2Q8N162 312 aa11.48□□□□□ -0.57
PCDHGC3-208ENST00000622836 Q8N7P7 452 aa11.48□□□□□ -0.57
PCDHGC3-208ENST00000622836 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP11.48□□□□□ -0.57
PCDHGC3-208ENST00000622836 ZDHHC22Q8N966 263 aa11.48□□□□□ -0.57
PCDHGC3-208ENST00000622836 SPATA3Q8NHX4 192 aa11.48□□□□□ -0.57
PCDHGC3-208ENST00000622836 SGCDQ92629 289 aa11.48□□□□□ -0.57
PCDHGC3-208ENST00000622836 THRSPQ92748 146 aa11.48□□□□□ -0.57
PCDHGC3-208ENST00000622836 ZNF48Q96MX3 618 aaPredicted RBP11.48□□□□□ -0.57
PCDHGC3-208ENST00000622836 NR1H4Q96RI1 486 aaPredicted RBP11.48□□□□□ -0.57
PCDHGC3-208ENST00000622836 NKX3-1Q99801 234 aaPredicted RBP11.48□□□□□ -0.57
PCDHGC3-208ENST00000622836 Q9H521 79 aa11.48□□□□□ -0.57
PCDHGC3-208ENST00000622836 ESM1Q9NQ30 184 aa11.48□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms