RNA–Protein interactions for RNA: ENST00000621747.5

VEGFA-229, Transcript of vascular endothelial growth factor A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VEGFA, Length 1,116 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-229ENST00000621747 MEF2CQ06413 473 aaPredicted RBP20.51■□□□□ 0.87
VEGFA-229ENST00000621747 SRSF4Q08170 494 aaKnown RBP20.51■□□□□ 0.87
VEGFA-229ENST00000621747 PDZK1IP1Q13113 114 aa20.51■□□□□ 0.87
VEGFA-229ENST00000621747 AANATQ16613 207 aa20.51■□□□□ 0.87
VEGFA-229ENST00000621747 LRRC75BQ2VPJ9 315 aa20.51■□□□□ 0.87
VEGFA-229ENST00000621747 SPIN3Q5JUX0 258 aa20.51■□□□□ 0.87
VEGFA-229ENST00000621747 TREML4Q6UXN2 200 aa20.51■□□□□ 0.87
VEGFA-229ENST00000621747 ZNF782Q6ZMW2 699 aaPredicted RBP20.51■□□□□ 0.87
VEGFA-229ENST00000621747 ZNF555Q8NEP9 628 aa20.51■□□□□ 0.87
VEGFA-229ENST00000621747 OR13D1Q8NGV5 346 aa20.51■□□□□ 0.87
VEGFA-229ENST00000621747 STMN2Q93045 179 aa20.51■□□□□ 0.87
VEGFA-229ENST00000621747 ISG20L2Q9H9L3 353 aaKnown RBP20.51■□□□□ 0.87
VEGFA-229ENST00000621747 TMEM82A0PJX8 343 aa20.5■□□□□ 0.87
VEGFA-229ENST00000621747 TMEM212A6NML5 194 aa20.5■□□□□ 0.87
VEGFA-229ENST00000621747 TSPAN9O75954 239 aa20.5■□□□□ 0.87
VEGFA-229ENST00000621747 CLPXO76031 633 aa20.5■□□□□ 0.87
VEGFA-229ENST00000621747 PRKACAP17612 351 aa20.5■□□□□ 0.87
VEGFA-229ENST00000621747 GABRR1P24046 479 aa20.5■□□□□ 0.87
VEGFA-229ENST00000621747 DLX6P56179 175 aa20.5■□□□□ 0.87
VEGFA-229ENST00000621747 EDDM3AQ14507 147 aa20.5■□□□□ 0.87
VEGFA-229ENST00000621747 ZNF146Q15072 292 aa20.5■□□□□ 0.87
VEGFA-229ENST00000621747 GRK1Q15835 563 aa20.5■□□□□ 0.87
VEGFA-229ENST00000621747 ZSCAN26Q16670 478 aa20.5■□□□□ 0.87
VEGFA-229ENST00000621747 KLHL22Q53GT1 634 aa20.5■□□□□ 0.87
VEGFA-229ENST00000621747 OR13C9Q8NGT0 318 aa20.5■□□□□ 0.87
VEGFA-229ENST00000621747 HAVCR2Q8TDQ0 301 aa20.5■□□□□ 0.87
VEGFA-229ENST00000621747 AJUBAQ96IF1 538 aa20.5■□□□□ 0.87
VEGFA-229ENST00000621747 ZNF714Q96N38 554 aa20.5■□□□□ 0.87
VEGFA-229ENST00000621747 RDH12Q96NR8 316 aa20.5■□□□□ 0.87
VEGFA-229ENST00000621747 COMMD4Q9H0A8 199 aa20.5■□□□□ 0.87
VEGFA-229ENST00000621747 PPA2Q9H2U2 334 aa20.5■□□□□ 0.87
VEGFA-229ENST00000621747 ZCCHC4Q9H5U6 513 aa20.5■□□□□ 0.87
VEGFA-229ENST00000621747 MRPS18AQ9NVS2 196 aaKnown RBP20.5■□□□□ 0.87
VEGFA-229ENST00000621747 IL36RNQ9UBH0 155 aa20.5■□□□□ 0.87
VEGFA-229ENST00000621747 TRRAPQ9Y4A5 3859 aa20.5■□□□□ 0.87
VEGFA-229ENST00000621747 hADV38S2A0JD32 116 aa20.49■□□□□ 0.87
VEGFA-229ENST00000621747 CCDC159P0C7I6 412 aa20.49■□□□□ 0.87
VEGFA-229ENST00000621747 GBX2P52951 348 aaPredicted RBP20.49■□□□□ 0.87
VEGFA-229ENST00000621747 PROK1P58294 105 aa20.49■□□□□ 0.87
VEGFA-229ENST00000621747 OR52I1Q8NGK6 324 aa20.49■□□□□ 0.87
VEGFA-229ENST00000621747 PPP1R35Q8TAP8 253 aa20.49■□□□□ 0.87
VEGFA-229ENST00000621747 RFT1Q96AA3 541 aa20.49■□□□□ 0.87
VEGFA-229ENST00000621747 SMPD3Q9NY59 655 aaPredicted RBP20.49■□□□□ 0.87
VEGFA-229ENST00000621747 TIMM23O14925 209 aa20.48■□□□□ 0.87
VEGFA-229ENST00000621747 DUSP1P28562 367 aa20.48■□□□□ 0.87
VEGFA-229ENST00000621747 LPCAT4Q643R3 524 aa20.48■□□□□ 0.87
VEGFA-229ENST00000621747 OR5AK2Q8NH90 309 aa20.48■□□□□ 0.87
VEGFA-229ENST00000621747 APH1BQ8WW43 257 aa20.48■□□□□ 0.87
VEGFA-229ENST00000621747 ZNF649Q9BS31 505 aa20.48■□□□□ 0.87
VEGFA-229ENST00000621747 CHST6Q9GZX3 395 aa20.48■□□□□ 0.87
VEGFA-229ENST00000621747 HMG20AQ9NP66 347 aa20.48■□□□□ 0.87
VEGFA-229ENST00000621747 RAB18Q9NP72 206 aa20.48■□□□□ 0.87
VEGFA-229ENST00000621747 PCDHGB5Q9Y5G0 923 aa20.48■□□□□ 0.87
VEGFA-229ENST00000621747 LINC00312Q9Y6C7 94 aa20.48■□□□□ 0.87
VEGFA-229ENST00000621747 ZFPL1O95159 310 aa20.47■□□□□ 0.87
VEGFA-229ENST00000621747 IGHV1-8P0DP01 117 aa20.47■□□□□ 0.87
VEGFA-229ENST00000621747 CALCBP10092 127 aa20.47■□□□□ 0.87
VEGFA-229ENST00000621747 SNU13P55769 128 aaKnown RBP20.47■□□□□ 0.87
VEGFA-229ENST00000621747 LY6EQ16553 131 aa20.47■□□□□ 0.87
VEGFA-229ENST00000621747 SERPINA12Q8IW75 414 aa20.47■□□□□ 0.87
VEGFA-229ENST00000621747 OR52N4Q8NGI2 321 aa20.47■□□□□ 0.87
VEGFA-229ENST00000621747 OR5D14Q8NGL3 314 aa20.47■□□□□ 0.87
VEGFA-229ENST00000621747 SPACA5Q96QH8 159 aa20.47■□□□□ 0.87
VEGFA-229ENST00000621747 RHOFQ9HBH0 211 aa20.47■□□□□ 0.87
VEGFA-229ENST00000621747 EXOSC4Q9NPD3 245 aaKnown RBP20.47■□□□□ 0.87
VEGFA-229ENST00000621747 DHDHQ9UQ10 334 aa20.47■□□□□ 0.87
VEGFA-229ENST00000621747 GSTK1Q9Y2Q3 226 aa20.47■□□□□ 0.87
VEGFA-229ENST00000621747 TBL2Q9Y4P3 447 aaKnown RBP20.47■□□□□ 0.87
VEGFA-229ENST00000621747 MEX3AA1L020 520 aaKnown RBP20.46■□□□□ 0.87
VEGFA-229ENST00000621747 M0QZ24 198 aa20.46■□□□□ 0.87
VEGFA-229ENST00000621747 SH2D1BO14796 132 aa20.46■□□□□ 0.87
VEGFA-229ENST00000621747 MGST3O14880 152 aa20.46■□□□□ 0.87
VEGFA-229ENST00000621747 PSPNO60542 156 aa20.46■□□□□ 0.87
VEGFA-229ENST00000621747 KDM4BO94953 1096 aa20.46■□□□□ 0.87
VEGFA-229ENST00000621747 ALX3O95076 343 aa20.46■□□□□ 0.87
VEGFA-229ENST00000621747 ARG1P05089 322 aa20.46■□□□□ 0.87
VEGFA-229ENST00000621747 HCKP08631 526 aa20.46■□□□□ 0.87
VEGFA-229ENST00000621747 SAXO1Q8IYX7 474 aa20.46■□□□□ 0.87
VEGFA-229ENST00000621747 TSEN15Q8WW01 171 aaKnown RBP20.46■□□□□ 0.87
VEGFA-229ENST00000621747 FOXRED1Q96CU9 486 aaPredicted RBP20.46■□□□□ 0.87
VEGFA-229ENST00000621747 E9PI62 339 aa20.45■□□□□ 0.86
VEGFA-229ENST00000621747 PAX6P26367 422 aa20.45■□□□□ 0.86
VEGFA-229ENST00000621747 KRTAP10-3P60369 221 aa20.45■□□□□ 0.86
VEGFA-229ENST00000621747 SLC35E4Q6ICL7 350 aa20.45■□□□□ 0.86
VEGFA-229ENST00000621747 LIAT1Q6ZQX7 453 aa20.45■□□□□ 0.86
VEGFA-229ENST00000621747 TCF23Q7RTU1 214 aa20.45■□□□□ 0.86
VEGFA-229ENST00000621747 PARP16Q8N5Y8 322 aa20.45■□□□□ 0.86
VEGFA-229ENST00000621747 TPRX1Q8N7U7 411 aa20.45■□□□□ 0.86
VEGFA-229ENST00000621747 OR4S1Q8NGB4 309 aa20.45■□□□□ 0.86
VEGFA-229ENST00000621747 OR5D18Q8NGL1 313 aa20.45■□□□□ 0.86
VEGFA-229ENST00000621747 PDCD1LG2Q9BQ51 273 aa20.45■□□□□ 0.86
VEGFA-229ENST00000621747 JAM3Q9BX67 310 aa20.45■□□□□ 0.86
VEGFA-229ENST00000621747 TCF7L1Q9HCS4 588 aa20.45■□□□□ 0.86
VEGFA-229ENST00000621747 IGKV1-12A0A0C4DH73 117 aa20.44■□□□□ 0.86
VEGFA-229ENST00000621747 FAM90A8PA6NJQ4 464 aa20.44■□□□□ 0.86
VEGFA-229ENST00000621747 ODF3BA8MYP8 253 aa20.44■□□□□ 0.86
VEGFA-229ENST00000621747 SIRPB1O00241 398 aa20.44■□□□□ 0.86
VEGFA-229ENST00000621747 SULT1B1O43704 296 aa20.44■□□□□ 0.86
VEGFA-229ENST00000621747 IGKV1D-12P01611 117 aa20.44■□□□□ 0.86
VEGFA-229ENST00000621747 ERP29P30040 261 aaKnown RBP20.44■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms