RNA–Protein interactions for RNA: ENST00000620514.1

HMGN3-203, Transcript of high mobility group nucleosomal binding domain 3, humanhuman

TSL 3 BASIC

Gene HMGN3, Length 1,010 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN3-203ENST00000620514 ZNF676Q8N7Q3 588 aa13.93□□□□□ -0.18
HMGN3-203ENST00000620514 TPRX1Q8N7U7 411 aa13.93□□□□□ -0.18
HMGN3-203ENST00000620514 OR13C3Q8NGS6 347 aa13.93□□□□□ -0.18
HMGN3-203ENST00000620514 OR13C9Q8NGT0 318 aa13.93□□□□□ -0.18
HMGN3-203ENST00000620514 PPP1R35Q8TAP8 253 aa13.93□□□□□ -0.18
HMGN3-203ENST00000620514 OPALINQ96PE5 141 aa13.93□□□□□ -0.18
HMGN3-203ENST00000620514 ZNF649Q9BS31 505 aa13.93□□□□□ -0.18
HMGN3-203ENST00000620514 CHST6Q9GZX3 395 aa13.93□□□□□ -0.18
HMGN3-203ENST00000620514 MEGF8Q7Z7M0 2845 aa13.93□□□□□ -0.18
HMGN3-203ENST00000620514 CMYA5Q8N3K9 4069 aa13.92□□□□□ -0.18
HMGN3-203ENST00000620514 IGKV1-12A0A0C4DH73 117 aa13.92□□□□□ -0.18
HMGN3-203ENST00000620514 LOC100130705A0A1B0GUX0 176 aa13.92□□□□□ -0.18
HMGN3-203ENST00000620514 E9PI62 339 aa13.92□□□□□ -0.18
HMGN3-203ENST00000620514 KCNAB3O43448 404 aa13.92□□□□□ -0.18
HMGN3-203ENST00000620514 PSPNO60542 156 aa13.92□□□□□ -0.18
HMGN3-203ENST00000620514 IGKV1D-12P01611 117 aa13.92□□□□□ -0.18
HMGN3-203ENST00000620514 ZNF728P0DKX0 622 aa13.92□□□□□ -0.18
HMGN3-203ENST00000620514 PRKACAP17612 351 aa13.92□□□□□ -0.18
HMGN3-203ENST00000620514 GABRR1P24046 479 aa13.92□□□□□ -0.18
HMGN3-203ENST00000620514 LGALS4P56470 323 aa13.92□□□□□ -0.18
HMGN3-203ENST00000620514 PDZK1IP1Q13113 114 aa13.92□□□□□ -0.18
HMGN3-203ENST00000620514 ASPHD2Q6ICH7 369 aa13.92□□□□□ -0.18
HMGN3-203ENST00000620514 LHFPL2Q6ZUX7 228 aa13.92□□□□□ -0.18
HMGN3-203ENST00000620514 Q8IYB0 196 aa13.92□□□□□ -0.18
HMGN3-203ENST00000620514 OR4S1Q8NGB4 309 aa13.92□□□□□ -0.18
HMGN3-203ENST00000620514 OR5D18Q8NGL1 313 aa13.92□□□□□ -0.18
HMGN3-203ENST00000620514 PIFOQ8TCI5 191 aa13.92□□□□□ -0.18
HMGN3-203ENST00000620514 APH1BQ8WW43 257 aa13.92□□□□□ -0.18
HMGN3-203ENST00000620514 FAM118AQ9NWS6 357 aa13.92□□□□□ -0.18
HMGN3-203ENST00000620514 SIGLEC9Q9Y336 463 aa13.92□□□□□ -0.18
HMGN3-203ENST00000620514 DSCAML1Q8TD84 2053 aa13.91□□□□□ -0.18
HMGN3-203ENST00000620514 MEGF11A6BM72 1044 aa13.91□□□□□ -0.18
HMGN3-203ENST00000620514 EBAG9O00559 213 aa13.91□□□□□ -0.18
HMGN3-203ENST00000620514 MPZL2O60487 215 aa13.91□□□□□ -0.18
HMGN3-203ENST00000620514 CYB5AP00167 134 aa13.91□□□□□ -0.18
HMGN3-203ENST00000620514 GRK1Q15835 563 aa13.91□□□□□ -0.18
HMGN3-203ENST00000620514 PLA1AQ53H76 456 aa13.91□□□□□ -0.18
HMGN3-203ENST00000620514 LDLRAD2Q5SZI1 272 aa13.91□□□□□ -0.18
HMGN3-203ENST00000620514 CRIP3Q6Q6R5 217 aa13.91□□□□□ -0.18
HMGN3-203ENST00000620514 SYS1Q8N2H4 156 aa13.91□□□□□ -0.18
HMGN3-203ENST00000620514 OR52I1Q8NGK6 324 aa13.91□□□□□ -0.18
HMGN3-203ENST00000620514 SPSB1Q96BD6 273 aa13.91□□□□□ -0.18
HMGN3-203ENST00000620514 Q96MT0 163 aa13.91□□□□□ -0.18
HMGN3-203ENST00000620514 SEBOXQ9HB31 216 aaPredicted RBP13.91□□□□□ -0.18
HMGN3-203ENST00000620514 ERVK13-1Q9NX77 482 aa13.91□□□□□ -0.18
HMGN3-203ENST00000620514 FAM90A8PA6NJQ4 464 aa13.9□□□□□ -0.18
HMGN3-203ENST00000620514 ODF3BA8MYP8 253 aa13.9□□□□□ -0.18
HMGN3-203ENST00000620514 SIRPB1O00241 398 aa13.9□□□□□ -0.18
HMGN3-203ENST00000620514 BAG2O95816 211 aa13.9□□□□□ -0.18
HMGN3-203ENST00000620514 FADS2O95864 444 aaKnown RBP13.9□□□□□ -0.18
HMGN3-203ENST00000620514 MT-ND2P03891 347 aa13.9□□□□□ -0.18
HMGN3-203ENST00000620514 ARG1P05089 322 aa13.9□□□□□ -0.18
HMGN3-203ENST00000620514 OCM2P0CE71 109 aa13.9□□□□□ -0.18
HMGN3-203ENST00000620514 OCMP0CE72 109 aaPredicted RBP13.9□□□□□ -0.18
HMGN3-203ENST00000620514 IGHV1-8P0DP01 117 aa13.9□□□□□ -0.18
HMGN3-203ENST00000620514 PEX2P28328 305 aa13.9□□□□□ -0.18
HMGN3-203ENST00000620514 OR3A1P47881 315 aa13.9□□□□□ -0.18
HMGN3-203ENST00000620514 MEF2CQ06413 473 aaPredicted RBP13.9□□□□□ -0.18
HMGN3-203ENST00000620514 ZNF146Q15072 292 aa13.9□□□□□ -0.18
HMGN3-203ENST00000620514 AANATQ16613 207 aa13.9□□□□□ -0.18
HMGN3-203ENST00000620514 MRPL48Q96GC5 212 aaKnown RBP13.9□□□□□ -0.18
HMGN3-203ENST00000620514 ZNF714Q96N38 554 aa13.9□□□□□ -0.18
HMGN3-203ENST00000620514 ZCCHC4Q9H5U6 513 aa13.9□□□□□ -0.18
HMGN3-203ENST00000620514 TCF7L1Q9HCS4 588 aa13.9□□□□□ -0.18
HMGN3-203ENST00000620514 HMG20AQ9NP66 347 aa13.9□□□□□ -0.18
HMGN3-203ENST00000620514 GSTK1Q9Y2Q3 226 aa13.9□□□□□ -0.18
HMGN3-203ENST00000620514 WNK1Q9H4A3 2382 aa13.89□□□□□ -0.19
HMGN3-203ENST00000620514 hADV38S2A0JD32 116 aa13.89□□□□□ -0.19
HMGN3-203ENST00000620514 M0QZ24 198 aa13.89□□□□□ -0.19
HMGN3-203ENST00000620514 TIMM23O14925 209 aa13.89□□□□□ -0.19
HMGN3-203ENST00000620514 CHST1O43916 411 aa13.89□□□□□ -0.19
HMGN3-203ENST00000620514 KDM4BO94953 1096 aa13.89□□□□□ -0.19
HMGN3-203ENST00000620514 ZFPL1O95159 310 aa13.89□□□□□ -0.19
HMGN3-203ENST00000620514 RBP4P02753 201 aa13.89□□□□□ -0.19
HMGN3-203ENST00000620514 GABRA5P31644 462 aa13.89□□□□□ -0.19
HMGN3-203ENST00000620514 RAB13P51153 203 aa13.89□□□□□ -0.19
HMGN3-203ENST00000620514 RAB40BQ12829 278 aa13.89□□□□□ -0.19
HMGN3-203ENST00000620514 SMN1Q16637 294 aaKnown RBP13.89□□□□□ -0.19
HMGN3-203ENST00000620514 ZNF626Q68DY1 528 aa13.89□□□□□ -0.19
HMGN3-203ENST00000620514 OR11H6Q8NGC7 330 aa13.89□□□□□ -0.19
HMGN3-203ENST00000620514 OR13D1Q8NGV5 346 aa13.89□□□□□ -0.19
HMGN3-203ENST00000620514 PDCD1LG2Q9BQ51 273 aa13.89□□□□□ -0.19
HMGN3-203ENST00000620514 NEK6Q9HC98 313 aa13.89□□□□□ -0.19
HMGN3-203ENST00000620514 INPP5EQ9NRR6 644 aa13.89□□□□□ -0.19
HMGN3-203ENST00000620514 MRPS18AQ9NVS2 196 aaKnown RBP13.89□□□□□ -0.19
HMGN3-203ENST00000620514 RPL36Q9Y3U8 105 aaKnown RBP13.89□□□□□ -0.19
HMGN3-203ENST00000620514 MGST3O14880 152 aa13.88□□□□□ -0.19
HMGN3-203ENST00000620514 WBP4O75554 376 aaKnown RBP13.88□□□□□ -0.19
HMGN3-203ENST00000620514 MMP23AO75900 390 aa13.88□□□□□ -0.19
HMGN3-203ENST00000620514 OR2H2O95918 312 aa13.88□□□□□ -0.19
HMGN3-203ENST00000620514 GTF2A1P52655 376 aaPredicted RBP13.88□□□□□ -0.19
HMGN3-203ENST00000620514 DYNC1I2Q13409 638 aaKnown RBP13.88□□□□□ -0.19
HMGN3-203ENST00000620514 SPIN3Q5JUX0 258 aa13.88□□□□□ -0.19
HMGN3-203ENST00000620514 OR5AK2Q8NH90 309 aa13.88□□□□□ -0.19
HMGN3-203ENST00000620514 EXOSC4Q9NPD3 245 aaKnown RBP13.88□□□□□ -0.19
HMGN3-203ENST00000620514 FBLN5Q9UBX5 448 aa13.88□□□□□ -0.19
HMGN3-203ENST00000620514 TBL2Q9Y4P3 447 aaKnown RBP13.88□□□□□ -0.19
HMGN3-203ENST00000620514 LINC00312Q9Y6C7 94 aa13.88□□□□□ -0.19
HMGN3-203ENST00000620514 TMEM212A6NML5 194 aa13.87□□□□□ -0.19
HMGN3-203ENST00000620514 LIMS3P0CW19 117 aa13.87□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms