RNA–Protein interactions for RNA: ENST00000620393.4

CPNE3-209, Transcript of copine 3, humanhuman

TSL 5

Gene CPNE3, Length 680 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3-209ENST00000620393 DEGS1O15121 323 aa6.74□□□□□ -1.33
CPNE3-209ENST00000620393 SOCS1O15524 211 aa6.74□□□□□ -1.33
CPNE3-209ENST00000620393 CYB5R3P00387 301 aaPredicted RBP6.74□□□□□ -1.33
CPNE3-209ENST00000620393 KNG1P01042 644 aa6.74□□□□□ -1.33
CPNE3-209ENST00000620393 HLA-DQB1P01920 261 aa6.74□□□□□ -1.33
CPNE3-209ENST00000620393 EGR1P18146 543 aa6.74□□□□□ -1.33
CPNE3-209ENST00000620393 CPT2P23786 658 aa6.74□□□□□ -1.33
CPNE3-209ENST00000620393 CDK2P24941 298 aa6.74□□□□□ -1.33
CPNE3-209ENST00000620393 PTBP1P26599 531 aaKnown RBP eCLIP6.74□□□□□ -1.33
CPNE3-209ENST00000620393 BLVRBP30043 206 aaPredicted RBP6.74□□□□□ -1.33
CPNE3-209ENST00000620393 RBMXP38159 391 aaKnown RBP6.74□□□□□ -1.33
CPNE3-209ENST00000620393 CDKN1AP38936 164 aa6.74□□□□□ -1.33
CPNE3-209ENST00000620393 MNDAP41218 407 aa6.74□□□□□ -1.33
CPNE3-209ENST00000620393 EFNA4P52798 201 aa6.74□□□□□ -1.33
CPNE3-209ENST00000620393 RBM11P57052 281 aaKnown RBP6.74□□□□□ -1.33
CPNE3-209ENST00000620393 GMFBP60983 142 aa6.74□□□□□ -1.33
CPNE3-209ENST00000620393 IL13RA2Q14627 380 aa6.74□□□□□ -1.33
CPNE3-209ENST00000620393 ZNF146Q15072 292 aa6.74□□□□□ -1.33
CPNE3-209ENST00000620393 MPV17LQ2QL34 196 aa6.74□□□□□ -1.33
CPNE3-209ENST00000620393 HFEQ30201 348 aa6.74□□□□□ -1.33
CPNE3-209ENST00000620393 PIGYQ3MUY2 71 aa6.74□□□□□ -1.33
CPNE3-209ENST00000620393 MOGAT2Q3SYC2 334 aa6.74□□□□□ -1.33
CPNE3-209ENST00000620393 CDNFQ49AH0 187 aa6.74□□□□□ -1.33
CPNE3-209ENST00000620393 SPANXN2Q5MJ10 180 aa6.74□□□□□ -1.33
CPNE3-209ENST00000620393 SIGIRRQ6IA17 410 aa6.74□□□□□ -1.33
CPNE3-209ENST00000620393 FIP1L1Q6UN15 594 aaKnown RBP6.74□□□□□ -1.33
CPNE3-209ENST00000620393 Q6ZTK2 550 aa6.74□□□□□ -1.33
CPNE3-209ENST00000620393 LINC00596Q86U02 117 aa6.74□□□□□ -1.33
CPNE3-209ENST00000620393 C1orf87Q8N0U7 546 aa6.74□□□□□ -1.33
CPNE3-209ENST00000620393 MFSD4AQ8N468 514 aa6.74□□□□□ -1.33
CPNE3-209ENST00000620393 DTX3Q8N9I9 347 aa6.74□□□□□ -1.33
CPNE3-209ENST00000620393 BOLLQ8N9W6 283 aaKnown RBP6.74□□□□□ -1.33
CPNE3-209ENST00000620393 CHST4Q8NCG5 386 aa6.74□□□□□ -1.33
CPNE3-209ENST00000620393 OR10R2Q8NGX6 335 aa6.74□□□□□ -1.33
CPNE3-209ENST00000620393 YIPF5Q969M3 257 aa6.74□□□□□ -1.33
CPNE3-209ENST00000620393 SEH1LQ96EE3 360 aa6.74□□□□□ -1.33
CPNE3-209ENST00000620393 ABHD1Q96SE0 405 aa6.74□□□□□ -1.33
CPNE3-209ENST00000620393 NICN1Q9BSH3 213 aa6.74□□□□□ -1.33
CPNE3-209ENST00000620393 CXorf56Q9H5V9 222 aa6.74□□□□□ -1.33
CPNE3-209ENST00000620393 AKIP1Q9NQ31 210 aa6.74□□□□□ -1.33
CPNE3-209ENST00000620393 GLS2Q9UI32 602 aa6.74□□□□□ -1.33
CPNE3-209ENST00000620393 MRPS7Q9Y2R9 242 aaKnown RBP6.74□□□□□ -1.33
CPNE3-209ENST00000620393 NPTNQ9Y639 398 aa6.74□□□□□ -1.33
CPNE3-209ENST00000620393 CACNG2Q9Y698 323 aa6.74□□□□□ -1.33
CPNE3-209ENST00000620393 HELZ2Q9BYK8 2649 aaKnown RBP6.73□□□□□ -1.33
CPNE3-209ENST00000620393 PPIAL4EA0A075B759 164 aa6.73□□□□□ -1.33
CPNE3-209ENST00000620393 RFPL4AA6NLU0 287 aa6.73□□□□□ -1.33
CPNE3-209ENST00000620393 CLDN25C9JDP6 229 aa6.73□□□□□ -1.33
CPNE3-209ENST00000620393 PPIAL4DF5H284 164 aa6.73□□□□□ -1.33
CPNE3-209ENST00000620393 RFPL4AL1F8VTS6 287 aa6.73□□□□□ -1.33
CPNE3-209ENST00000620393 LYNX1G3V0Z9 82 aa6.73□□□□□ -1.33
CPNE3-209ENST00000620393 LGALS8O00214 317 aa6.73□□□□□ -1.33
CPNE3-209ENST00000620393 RP2O75695 350 aa6.73□□□□□ -1.33
CPNE3-209ENST00000620393 FSTL3O95633 263 aa6.73□□□□□ -1.33
CPNE3-209ENST00000620393 GLAP06280 429 aa6.73□□□□□ -1.33
CPNE3-209ENST00000620393 MELTFP08582 738 aa6.73□□□□□ -1.33
CPNE3-209ENST00000620393 PPIAL4FP0DN26 164 aa6.73□□□□□ -1.33
CPNE3-209ENST00000620393 LYNX1P0DP58 116 aa6.73□□□□□ -1.33
CPNE3-209ENST00000620393 PSG2P11465 335 aa6.73□□□□□ -1.33
CPNE3-209ENST00000620393 DAOP14920 347 aa6.73□□□□□ -1.33
CPNE3-209ENST00000620393 PAX1P15863 534 aa6.73□□□□□ -1.33
CPNE3-209ENST00000620393 MUC1P15941 1255 aaPredicted RBP6.73□□□□□ -1.33
CPNE3-209ENST00000620393 FUT3P21217 361 aa6.73□□□□□ -1.33
CPNE3-209ENST00000620393 GABRR1P24046 479 aa6.73□□□□□ -1.33
CPNE3-209ENST00000620393 LMO1P25800 156 aa6.73□□□□□ -1.33
CPNE3-209ENST00000620393 DUSP1P28562 367 aa6.73□□□□□ -1.33
CPNE3-209ENST00000620393 PRDX2P32119 198 aa6.73□□□□□ -1.33
CPNE3-209ENST00000620393 NR4A2P43354 598 aa6.73□□□□□ -1.33
CPNE3-209ENST00000620393 PTH2RP49190 550 aa6.73□□□□□ -1.33
CPNE3-209ENST00000620393 TMEM33P57088 247 aa6.73□□□□□ -1.33
CPNE3-209ENST00000620393 TAS2R20P59543 309 aa6.73□□□□□ -1.33
CPNE3-209ENST00000620393 KRTAP10-9P60411 292 aa6.73□□□□□ -1.33
CPNE3-209ENST00000620393 HOXA4Q00056 320 aaPredicted RBP6.73□□□□□ -1.33
CPNE3-209ENST00000620393 PITPNAQ00169 270 aa6.73□□□□□ -1.33
CPNE3-209ENST00000620393 ZNF846Q147U1 533 aa6.73□□□□□ -1.33
CPNE3-209ENST00000620393 ARL6IP1Q15041 203 aa6.73□□□□□ -1.33
CPNE3-209ENST00000620393 PDCD1Q15116 288 aa6.73□□□□□ -1.33
CPNE3-209ENST00000620393 MICBQ29980 383 aa6.73□□□□□ -1.33
CPNE3-209ENST00000620393 SMIM21Q3B7S5 101 aa6.73□□□□□ -1.33
CPNE3-209ENST00000620393 ZNF260Q3ZCT1 412 aa6.73□□□□□ -1.33
CPNE3-209ENST00000620393 PLAC9Q5JTB6 97 aa6.73□□□□□ -1.33
CPNE3-209ENST00000620393 SPIN3Q5JUX0 258 aa6.73□□□□□ -1.33
CPNE3-209ENST00000620393 TMEM69Q5SWH9 247 aa6.73□□□□□ -1.33
CPNE3-209ENST00000620393 FAM201AQ5SY85 155 aa6.73□□□□□ -1.33
CPNE3-209ENST00000620393 TEX36Q5VZQ5 186 aa6.73□□□□□ -1.33
CPNE3-209ENST00000620393 HIST2H2BCQ6DN03 193 aa6.73□□□□□ -1.33
CPNE3-209ENST00000620393 SFRP4Q6FHJ7 346 aaPredicted RBP6.73□□□□□ -1.33
CPNE3-209ENST00000620393 PYHIN1Q6K0P9 492 aa6.73□□□□□ -1.33
CPNE3-209ENST00000620393 Q6P435 159 aa6.73□□□□□ -1.33
CPNE3-209ENST00000620393 FAM131AQ6UXB0 335 aa6.73□□□□□ -1.33
CPNE3-209ENST00000620393 BAIAP2L2Q6UXY1 529 aa6.73□□□□□ -1.33
CPNE3-209ENST00000620393 IZUMO1Q8IYV9 350 aa6.73□□□□□ -1.33
CPNE3-209ENST00000620393 DEFB108BQ8NET1 73 aa6.73□□□□□ -1.33
CPNE3-209ENST00000620393 C15orf40Q8WUR7 153 aa6.73□□□□□ -1.33
CPNE3-209ENST00000620393 RAB3CQ96E17 227 aa6.73□□□□□ -1.33
CPNE3-209ENST00000620393 NEDD4LQ96PU5 975 aa6.73□□□□□ -1.33
CPNE3-209ENST00000620393 CCL19Q99731 98 aa6.73□□□□□ -1.33
CPNE3-209ENST00000620393 KRTAP4-8Q9BYQ9 185 aa6.73□□□□□ -1.33
CPNE3-209ENST00000620393 LIME1Q9H400 295 aa6.73□□□□□ -1.33
CPNE3-209ENST00000620393 AUNIPQ9H7T9 357 aa6.73□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 132.8 ms