RNA–Protein interactions for RNA: ENST00000616939.4

GPN1-212, Transcript of GPN-loop GTPase 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene GPN1, Length 1,832 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPN1-212ENST00000616939 NFAM1Q8NET5 270 aaPredicted RBP13.55□□□□□ -0.24
GPN1-212ENST00000616939 ELL3Q9HB65 397 aaPredicted RBP13.55□□□□□ -0.24
GPN1-212ENST00000616939 LYRM2Q9NU23 88 aaPredicted RBP13.55□□□□□ -0.24
GPN1-212ENST00000616939 PIGLQ9Y2B2 252 aa13.55□□□□□ -0.24
GPN1-212ENST00000616939 HS3ST3B1Q9Y662 390 aa13.55□□□□□ -0.24
GPN1-212ENST00000616939 CCDC187A0A096LP49 1063 aa13.54□□□□□ -0.24
GPN1-212ENST00000616939 C5orf63A6NC05 138 aa13.54□□□□□ -0.24
GPN1-212ENST00000616939 OR5H15A6NDH6 313 aa13.54□□□□□ -0.24
GPN1-212ENST00000616939 OR5H1A6NKK0 313 aa13.54□□□□□ -0.24
GPN1-212ENST00000616939 AQP7P3A6NL99 342 aa13.54□□□□□ -0.24
GPN1-212ENST00000616939 ZNF727A8MUV8 499 aa13.54□□□□□ -0.24
GPN1-212ENST00000616939 PPM1FP49593 454 aaPredicted RBP13.54□□□□□ -0.24
GPN1-212ENST00000616939 ERVFRD-1P60508 538 aa13.54□□□□□ -0.24
GPN1-212ENST00000616939 RALGAPA1Q6GYQ0 2036 aa13.54□□□□□ -0.24
GPN1-212ENST00000616939 CDPF1Q6NVV7 123 aa13.54□□□□□ -0.24
GPN1-212ENST00000616939 PIGTQ969N2 578 aa13.54□□□□□ -0.24
GPN1-212ENST00000616939 POM121Q96HA1 1249 aa13.54□□□□□ -0.24
GPN1-212ENST00000616939 TGIF2Q9GZN2 237 aa13.54□□□□□ -0.24
GPN1-212ENST00000616939 IL36GQ9NZH8 169 aa13.54□□□□□ -0.24
GPN1-212ENST00000616939 SEMA5BQ9P283 1151 aa13.54□□□□□ -0.24
GPN1-212ENST00000616939 NXT1Q9UKK6 140 aaKnown RBP13.54□□□□□ -0.24
GPN1-212ENST00000616939 WSB1Q9Y6I7 421 aa13.54□□□□□ -0.24
GPN1-212ENST00000616939 F5P12259 2224 aa13.54□□□□□ -0.24
GPN1-212ENST00000616939 CLEC18AA5D8T8 446 aa13.53□□□□□ -0.24
GPN1-212ENST00000616939 C2orf72A6NCS6 295 aa13.53□□□□□ -0.24
GPN1-212ENST00000616939 H0YL77 283 aa13.53□□□□□ -0.24
GPN1-212ENST00000616939 MKRN2OSH3BPM6 223 aa13.53□□□□□ -0.24
GPN1-212ENST00000616939 ATXN8OSP0DMR3 200 aa13.53□□□□□ -0.24
GPN1-212ENST00000616939 PNRC1Q12796 327 aaPredicted RBP13.53□□□□□ -0.24
GPN1-212ENST00000616939 ENDOGQ14249 297 aaKnown RBP13.53□□□□□ -0.24
GPN1-212ENST00000616939 HAGHQ16775 308 aa13.53□□□□□ -0.24
GPN1-212ENST00000616939 C1orf87Q8N0U7 546 aa13.53□□□□□ -0.24
GPN1-212ENST00000616939 CLEC18CQ8NCF0 446 aa13.53□□□□□ -0.24
GPN1-212ENST00000616939 CLDND2Q8NHS1 167 aa13.53□□□□□ -0.24
GPN1-212ENST00000616939 RNASE11Q8TAA1 199 aaKnown RBP13.53□□□□□ -0.24
GPN1-212ENST00000616939 TMEM54Q969K7 222 aa13.53□□□□□ -0.24
GPN1-212ENST00000616939 TMEM56Q96MV1 263 aa13.53□□□□□ -0.24
GPN1-212ENST00000616939 FAAP24Q9BTP7 215 aa13.53□□□□□ -0.24
GPN1-212ENST00000616939 PLSCR2Q9NRY7 297 aa13.53□□□□□ -0.24
GPN1-212ENST00000616939 FAM86C1Q9NVL1 165 aa13.53□□□□□ -0.24
GPN1-212ENST00000616939 DKKL1Q9UK85 242 aa13.53□□□□□ -0.24
GPN1-212ENST00000616939 TMEM56-RWDD3S4R434 201 aa13.53□□□□□ -0.24
GPN1-212ENST00000616939 LOC102723971A0A1B0GUV8 181 aa13.53□□□□□ -0.24
GPN1-212ENST00000616939 FAM24AA6NFZ4 105 aa13.53□□□□□ -0.24
GPN1-212ENST00000616939 ARGFXA6NJG6 315 aa13.53□□□□□ -0.24
GPN1-212ENST00000616939 SHISA8B8ZZ34 492 aa13.53□□□□□ -0.24
GPN1-212ENST00000616939 TSTD3H0UI37 97 aa13.53□□□□□ -0.24
GPN1-212ENST00000616939 SLC31A2O15432 143 aa13.53□□□□□ -0.24
GPN1-212ENST00000616939 SOD3P08294 240 aa13.53□□□□□ -0.24
GPN1-212ENST00000616939 RD3LP0DJH9 198 aa13.53□□□□□ -0.24
GPN1-212ENST00000616939 DDTP30046 118 aa13.53□□□□□ -0.24
GPN1-212ENST00000616939 PTGDSP41222 190 aa13.53□□□□□ -0.24
GPN1-212ENST00000616939 NKX2-1P43699 371 aaPredicted RBP13.53□□□□□ -0.24
GPN1-212ENST00000616939 HLA-DRB3P79483 266 aa13.53□□□□□ -0.24
GPN1-212ENST00000616939 TLE4Q04727 773 aa13.53□□□□□ -0.24
GPN1-212ENST00000616939 RSU1Q15404 277 aa13.53□□□□□ -0.24
GPN1-212ENST00000616939 CNN3Q15417 329 aaKnown RBP13.53□□□□□ -0.24
GPN1-212ENST00000616939 EXT1Q16394 746 aa13.53□□□□□ -0.24
GPN1-212ENST00000616939 PHLDA2Q53GA4 152 aa13.53□□□□□ -0.24
GPN1-212ENST00000616939 CARD17Q5XLA6 110 aa13.53□□□□□ -0.24
GPN1-212ENST00000616939 ZNF343Q6P1L6 599 aa13.53□□□□□ -0.24
GPN1-212ENST00000616939 SSX9Q7RTT3 188 aa13.53□□□□□ -0.24
GPN1-212ENST00000616939 SLC35G3Q8N808 338 aa13.53□□□□□ -0.24
GPN1-212ENST00000616939 OR5L1Q8NGL2 311 aa13.53□□□□□ -0.24
GPN1-212ENST00000616939 NKX2-4Q9H2Z4 354 aa13.53□□□□□ -0.24
GPN1-212ENST00000616939 FOXD3Q9UJU5 478 aaPredicted RBP13.53□□□□□ -0.24
GPN1-212ENST00000616939 LIPGQ9Y5X9 500 aa13.53□□□□□ -0.24
GPN1-212ENST00000616939 TGIF2-C20orf24A0A0A6YYL0 155 aa13.52□□□□□ -0.25
GPN1-212ENST00000616939 PHF1O43189 567 aaPredicted RBP13.52□□□□□ -0.25
GPN1-212ENST00000616939 KLK2P20151 261 aa13.52□□□□□ -0.25
GPN1-212ENST00000616939 ARL4DP49703 201 aa13.52□□□□□ -0.25
GPN1-212ENST00000616939 HERV-K104P61576 105 aa13.52□□□□□ -0.25
GPN1-212ENST00000616939 OR8G1Q15617 311 aa13.52□□□□□ -0.25
GPN1-212ENST00000616939 TMEM252Q8N6L7 170 aa13.52□□□□□ -0.25
GPN1-212ENST00000616939 CYB561D1Q8N8Q1 229 aa13.52□□□□□ -0.25
GPN1-212ENST00000616939 LMX1AQ8TE12 382 aa13.52□□□□□ -0.25
GPN1-212ENST00000616939 S100PBPQ96BU1 408 aa13.52□□□□□ -0.25
GPN1-212ENST00000616939 ZNF700Q9H0M5 742 aa13.52□□□□□ -0.25
GPN1-212ENST00000616939 TMEM222Q9H0R3 208 aa13.52□□□□□ -0.25
GPN1-212ENST00000616939 IGFLR1Q9H665 355 aa13.52□□□□□ -0.25
GPN1-212ENST00000616939 PIAS3Q9Y6X2 628 aa13.52□□□□□ -0.25
GPN1-212ENST00000616939 DBHP09172 617 aa13.51□□□□□ -0.25
GPN1-212ENST00000616939 CEACAM6P40199 344 aa13.51□□□□□ -0.25
GPN1-212ENST00000616939 VEGFBP49765 207 aa13.51□□□□□ -0.25
GPN1-212ENST00000616939 MTCP1P56278 107 aa13.51□□□□□ -0.25
GPN1-212ENST00000616939 TAS2R60P59551 318 aa13.51□□□□□ -0.25
GPN1-212ENST00000616939 FXYD4P59646 89 aa13.51□□□□□ -0.25
GPN1-212ENST00000616939 TSPO2Q5TGU0 170 aa13.51□□□□□ -0.25
GPN1-212ENST00000616939 TMEM211Q6ICI0 200 aa13.51□□□□□ -0.25
GPN1-212ENST00000616939 LHFPL2Q6ZUX7 228 aa13.51□□□□□ -0.25
GPN1-212ENST00000616939 STX12Q86Y82 276 aa13.51□□□□□ -0.25
GPN1-212ENST00000616939 PRSS58Q8IYP2 241 aa13.51□□□□□ -0.25
GPN1-212ENST00000616939 ZFP62Q8NB50 900 aaPredicted RBP13.51□□□□□ -0.25
GPN1-212ENST00000616939 NABP1Q96AH0 204 aa13.51□□□□□ -0.25
GPN1-212ENST00000616939 C2orf88Q9BSF0 95 aa13.51□□□□□ -0.25
GPN1-212ENST00000616939 ABHD14AQ9BUJ0 271 aa13.51□□□□□ -0.25
GPN1-212ENST00000616939 GPR61Q9BZJ8 451 aa13.51□□□□□ -0.25
GPN1-212ENST00000616939 KLRF1Q9NZS2 232 aa13.51□□□□□ -0.25
GPN1-212ENST00000616939 TRBV24-1A0A075B6N3 115 aa13.5□□□□□ -0.25
GPN1-212ENST00000616939 C3orf85A0A1B0GTC6 90 aa13.5□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms