RNA–Protein interactions for RNA: ENST00000616710.4

TNFRSF11A-205, Transcript of TNF receptor superfamily member 11a, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TNFRSF11A, Length 3,809 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF11A-205ENST00000616710 APOBEC1P41238 236 aaKnown RBP12.34□□□□□ -0.43
TNFRSF11A-205ENST00000616710 TNFSF10P50591 281 aa12.34□□□□□ -0.43
TNFRSF11A-205ENST00000616710 NEU1Q99519 415 aa12.34□□□□□ -0.43
TNFRSF11A-205ENST00000616710 RANBP2P49792 3224 aaKnown RBP12.34□□□□□ -0.43
TNFRSF11A-205ENST00000616710 TBPP20226 339 aa12.34□□□□□ -0.43
TNFRSF11A-205ENST00000616710 RELQ04864 619 aaPredicted RBP12.34□□□□□ -0.43
TNFRSF11A-205ENST00000616710 VHLLQ6RSH7 139 aa12.34□□□□□ -0.43
TNFRSF11A-205ENST00000616710 NPSR1Q6W5P4 371 aa12.34□□□□□ -0.43
TNFRSF11A-205ENST00000616710 C16orf47Q6ZP98 133 aaPredicted RBP12.34□□□□□ -0.43
TNFRSF11A-205ENST00000616710 CALHM1Q8IU99 346 aa12.34□□□□□ -0.43
TNFRSF11A-205ENST00000616710 OR56B2PQ8NGI1 322 aa12.34□□□□□ -0.43
TNFRSF11A-205ENST00000616710 VAMP8Q9BV40 100 aa12.34□□□□□ -0.43
TNFRSF11A-205ENST00000616710 TMED7-TICAM2A0A0A6YYA0 188 aa12.34□□□□□ -0.43
TNFRSF11A-205ENST00000616710 HSD17B6O14756 317 aa12.34□□□□□ -0.43
TNFRSF11A-205ENST00000616710 RER1O15258 196 aa12.34□□□□□ -0.43
TNFRSF11A-205ENST00000616710 OR2J2O76002 312 aa12.34□□□□□ -0.43
TNFRSF11A-205ENST00000616710 GSTP1P09211 210 aaKnown RBP12.34□□□□□ -0.43
TNFRSF11A-205ENST00000616710 TGFBR3Q03167 851 aa12.34□□□□□ -0.43
TNFRSF11A-205ENST00000616710 IZUMO4Q1ZYL8 232 aa12.34□□□□□ -0.43
TNFRSF11A-205ENST00000616710 TEX38Q6PEX7 206 aa12.34□□□□□ -0.43
TNFRSF11A-205ENST00000616710 CCDC71LQ8N9Z2 235 aa12.34□□□□□ -0.43
TNFRSF11A-205ENST00000616710 CAPNS2Q96L46 248 aa12.34□□□□□ -0.43
TNFRSF11A-205ENST00000616710 OR2A5Q96R48 311 aa12.34□□□□□ -0.43
TNFRSF11A-205ENST00000616710 SPIN2AQ99865 258 aa12.34□□□□□ -0.43
TNFRSF11A-205ENST00000616710 SPIN2BQ9BPZ2 258 aa12.34□□□□□ -0.43
TNFRSF11A-205ENST00000616710 ASXL3Q9C0F0 2248 aa12.33□□□□□ -0.44
TNFRSF11A-205ENST00000616710 NKX2-6A6NCS4 301 aa12.33□□□□□ -0.44
TNFRSF11A-205ENST00000616710 PLRG1O43660 514 aaKnown RBP12.33□□□□□ -0.44
TNFRSF11A-205ENST00000616710 TMEM127O75204 238 aa12.33□□□□□ -0.44
TNFRSF11A-205ENST00000616710 GAPDHP04406 335 aaKnown RBP12.33□□□□□ -0.44
TNFRSF11A-205ENST00000616710 FGF5P12034 268 aa12.33□□□□□ -0.44
TNFRSF11A-205ENST00000616710 PNLIPP16233 465 aa12.33□□□□□ -0.44
TNFRSF11A-205ENST00000616710 HLA-GP17693 338 aa12.33□□□□□ -0.44
TNFRSF11A-205ENST00000616710 NTF3P20783 257 aa12.33□□□□□ -0.44
TNFRSF11A-205ENST00000616710 IL11P20809 199 aa12.33□□□□□ -0.44
TNFRSF11A-205ENST00000616710 CD82P27701 267 aa12.33□□□□□ -0.44
TNFRSF11A-205ENST00000616710 FHL1Q13642 323 aa12.33□□□□□ -0.44
TNFRSF11A-205ENST00000616710 PCK2Q16822 640 aa12.33□□□□□ -0.44
TNFRSF11A-205ENST00000616710 PHF19Q5T6S3 580 aa12.33□□□□□ -0.44
TNFRSF11A-205ENST00000616710 SLC16A14Q7RTX9 510 aa12.33□□□□□ -0.44
TNFRSF11A-205ENST00000616710 C16orf82Q7Z2V1 217 aa12.33□□□□□ -0.44
TNFRSF11A-205ENST00000616710 RBM24Q9BX46 236 aaKnown RBP12.33□□□□□ -0.44
TNFRSF11A-205ENST00000616710 GDE1Q9NZC3 331 aa12.33□□□□□ -0.44
TNFRSF11A-205ENST00000616710 KLHL13Q9P2N7 655 aa12.33□□□□□ -0.44
TNFRSF11A-205ENST00000616710 TDRD6O60522 2096 aaKnown RBP12.33□□□□□ -0.44
TNFRSF11A-205ENST00000616710 HSFX4A0A1B0GTS1 333 aaPredicted RBP12.33□□□□□ -0.44
TNFRSF11A-205ENST00000616710 HSFX3A0A1B0GWH4 333 aaPredicted RBP12.33□□□□□ -0.44
TNFRSF11A-205ENST00000616710 SRP19P09132 144 aaKnown RBP12.33□□□□□ -0.44
TNFRSF11A-205ENST00000616710 IRF2P14316 349 aa12.33□□□□□ -0.44
TNFRSF11A-205ENST00000616710 UBE2G2P60604 165 aa12.33□□□□□ -0.44
TNFRSF11A-205ENST00000616710 ZNF684Q5T5D7 378 aa12.33□□□□□ -0.44
TNFRSF11A-205ENST00000616710 TMEM183AQ8IXX5 376 aa12.33□□□□□ -0.44
TNFRSF11A-205ENST00000616710 DIRC2Q96SL1 478 aa12.33□□□□□ -0.44
TNFRSF11A-205ENST00000616710 ZNF217O75362 1048 aa12.33□□□□□ -0.44
TNFRSF11A-205ENST00000616710 APODP05090 189 aa12.33□□□□□ -0.44
TNFRSF11A-205ENST00000616710 ZNF121P58317 390 aaPredicted RBP12.33□□□□□ -0.44
TNFRSF11A-205ENST00000616710 DPTQ07507 201 aa12.33□□□□□ -0.44
TNFRSF11A-205ENST00000616710 SPEM2Q0P670 501 aa12.33□□□□□ -0.44
TNFRSF11A-205ENST00000616710 CXorf66Q5JRM2 361 aaPredicted RBP12.33□□□□□ -0.44
TNFRSF11A-205ENST00000616710 FAM78BQ5VT40 261 aa12.33□□□□□ -0.44
TNFRSF11A-205ENST00000616710 TSLPQ969D9 159 aa12.33□□□□□ -0.44
TNFRSF11A-205ENST00000616710 APOOQ9BUR5 198 aa12.33□□□□□ -0.44
TNFRSF11A-205ENST00000616710 MTCL1Q9Y4B5 1905 aaKnown RBP12.32□□□□□ -0.44
TNFRSF11A-205ENST00000616710 TRAV36DV7A0A075B6V5 113 aa12.32□□□□□ -0.44
TNFRSF11A-205ENST00000616710 K7EQS6 105 aa12.32□□□□□ -0.44
TNFRSF11A-205ENST00000616710 CEBPBP17676 345 aa12.32□□□□□ -0.44
TNFRSF11A-205ENST00000616710 ENDOGQ14249 297 aaKnown RBP12.32□□□□□ -0.44
TNFRSF11A-205ENST00000616710 OR10J5Q8NHC4 309 aa12.32□□□□□ -0.44
TNFRSF11A-205ENST00000616710 UBALD1Q8TB05 177 aa12.32□□□□□ -0.44
TNFRSF11A-205ENST00000616710 MESP1Q9BRJ9 268 aa12.32□□□□□ -0.44
TNFRSF11A-205ENST00000616710 MYOZ1Q9NP98 299 aaPredicted RBP12.32□□□□□ -0.44
TNFRSF11A-205ENST00000616710 SPEGQ15772 3267 aa12.32□□□□□ -0.44
TNFRSF11A-205ENST00000616710 SPINT1O43278 529 aa12.32□□□□□ -0.44
TNFRSF11A-205ENST00000616710 EGR1P18146 543 aa12.32□□□□□ -0.44
TNFRSF11A-205ENST00000616710 HIST1H3AP68431 136 aa12.32□□□□□ -0.44
TNFRSF11A-205ENST00000616710 CA13Q8N1Q1 262 aa12.32□□□□□ -0.44
TNFRSF11A-205ENST00000616710 SLC39A11Q8N1S5 342 aa12.32□□□□□ -0.44
TNFRSF11A-205ENST00000616710 SLC38A9Q8NBW4 561 aa12.32□□□□□ -0.44
TNFRSF11A-205ENST00000616710 C11orf40Q8WZ69 217 aa12.32□□□□□ -0.44
TNFRSF11A-205ENST00000616710 NAT6Q93015 286 aa12.32□□□□□ -0.44
TNFRSF11A-205ENST00000616710 ZNF764Q96H86 408 aaPredicted RBP12.32□□□□□ -0.44
TNFRSF11A-205ENST00000616710 AP1S3Q96PC3 154 aa12.32□□□□□ -0.44
TNFRSF11A-205ENST00000616710 OR51I2Q9H344 312 aa12.32□□□□□ -0.44
TNFRSF11A-205ENST00000616710 ZNF286AQ9HBT8 521 aa12.32□□□□□ -0.44
TNFRSF11A-205ENST00000616710 TMED3Q9Y3Q3 217 aa12.32□□□□□ -0.44
TNFRSF11A-205ENST00000616710 TRBV6-7A0A0A0MS04 114 aa12.32□□□□□ -0.44
TNFRSF11A-205ENST00000616710 ADAM20O43506 726 aa12.32□□□□□ -0.44
TNFRSF11A-205ENST00000616710 CA11O75493 328 aa12.32□□□□□ -0.44
TNFRSF11A-205ENST00000616710 CEACAM5P06731 702 aa12.32□□□□□ -0.44
TNFRSF11A-205ENST00000616710 SELEP16581 610 aa12.32□□□□□ -0.44
TNFRSF11A-205ENST00000616710 TMEM50BP56557 158 aa12.32□□□□□ -0.44
TNFRSF11A-205ENST00000616710 FOXL2P58012 376 aa12.32□□□□□ -0.44
TNFRSF11A-205ENST00000616710 ADAMTSL4Q6UY14 1074 aa12.32□□□□□ -0.44
TNFRSF11A-205ENST00000616710 C1QL2Q7Z5L3 287 aa12.32□□□□□ -0.44
TNFRSF11A-205ENST00000616710 OR4C5Q8NGB2 326 aa12.32□□□□□ -0.44
TNFRSF11A-205ENST00000616710 TP53RKQ96S44 253 aa12.32□□□□□ -0.44
TNFRSF11A-205ENST00000616710 SERINC1Q9NRX5 453 aa12.32□□□□□ -0.44
TNFRSF11A-205ENST00000616710 RYDENQ9NUL5 291 aaKnown RBP12.32□□□□□ -0.44
TNFRSF11A-205ENST00000616710 TRAPPC1Q9Y5R8 145 aa12.32□□□□□ -0.44
TNFRSF11A-205ENST00000616710 KIF26AQ9ULI4 1882 aaPredicted RBP12.31□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms