RNA–Protein interactions for RNA: ENST00000613788.1

CD48-203, Transcript of CD48 molecule, humanhuman

TSL 1 (best) BASIC

Gene CD48, Length 1,500 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD48-203ENST00000613788 RBM11P57052 281 aaKnown RBP12.31□□□□□ -0.44
CD48-203ENST00000613788 RPS27AP62979 156 aaKnown RBP12.31□□□□□ -0.44
CD48-203ENST00000613788 UNC119Q13432 240 aa12.31□□□□□ -0.44
CD48-203ENST00000613788 IL13RA2Q14627 380 aa12.31□□□□□ -0.44
CD48-203ENST00000613788 Q5PR19 223 aa12.31□□□□□ -0.44
CD48-203ENST00000613788 ATPAF1Q5TC12 328 aaPredicted RBP12.31□□□□□ -0.44
CD48-203ENST00000613788 STUMQ69YW2 141 aa12.31□□□□□ -0.44
CD48-203ENST00000613788 DCDC5Q6ZRR9 648 aa12.31□□□□□ -0.44
CD48-203ENST00000613788 SPICQ8N5J4 248 aa12.31□□□□□ -0.44
CD48-203ENST00000613788 ANGPTL6Q8NI99 470 aa12.31□□□□□ -0.44
CD48-203ENST00000613788 LGALS14Q8TCE9 139 aa12.31□□□□□ -0.44
CD48-203ENST00000613788 TMEM246Q9BRR3 403 aa12.31□□□□□ -0.44
CD48-203ENST00000613788 BPESC1Q9GZL8 116 aa12.31□□□□□ -0.44
CD48-203ENST00000613788 KCNK15Q9H427 330 aa12.31□□□□□ -0.44
CD48-203ENST00000613788 OR14J1Q9UGF5 321 aa12.31□□□□□ -0.44
CD48-203ENST00000613788 METTL21EPA6NDL7 271 aa12.3□□□□□ -0.44
CD48-203ENST00000613788 FAM90A10PA6NDY2 464 aa12.3□□□□□ -0.44
CD48-203ENST00000613788 FAM90A18PA6NE21 464 aa12.3□□□□□ -0.44
CD48-203ENST00000613788 FAM90A16PA6NEW6 464 aa12.3□□□□□ -0.44
CD48-203ENST00000613788 FAM90A20PA6NIJ5 464 aa12.3□□□□□ -0.44
CD48-203ENST00000613788 FAM90A8PA6NJQ4 464 aa12.3□□□□□ -0.44
CD48-203ENST00000613788 FAM90A7PA6NKC0 464 aa12.3□□□□□ -0.44
CD48-203ENST00000613788 FAM90A22PA8MWA6 464 aa12.3□□□□□ -0.44
CD48-203ENST00000613788 FAM90A12PA8MX19 464 aa12.3□□□□□ -0.44
CD48-203ENST00000613788 FAM90A5PA8MXJ8 464 aa12.3□□□□□ -0.44
CD48-203ENST00000613788 FAM90A23PA8MXZ1 464 aa12.3□□□□□ -0.44
CD48-203ENST00000613788 GYPAP02724 150 aa12.3□□□□□ -0.44
CD48-203ENST00000613788 CHRM2P08172 466 aa12.3□□□□□ -0.44
CD48-203ENST00000613788 FAM90A15PP0C7V4 464 aa12.3□□□□□ -0.44
CD48-203ENST00000613788 FAM90A13PP0C7W8 464 aa12.3□□□□□ -0.44
CD48-203ENST00000613788 FAM90A14PP0C7W9 464 aa12.3□□□□□ -0.44
CD48-203ENST00000613788 FAM90A24PP0C7X0 464 aa12.3□□□□□ -0.44
CD48-203ENST00000613788 SLC25A16P16260 332 aa12.3□□□□□ -0.44
CD48-203ENST00000613788 CPT2P23786 658 aa12.3□□□□□ -0.44
CD48-203ENST00000613788 NR4A2P43354 598 aa12.3□□□□□ -0.44
CD48-203ENST00000613788 GABRA2P47869 451 aa12.3□□□□□ -0.44
CD48-203ENST00000613788 MPV17LQ2QL34 196 aa12.3□□□□□ -0.44
CD48-203ENST00000613788 PIGYQ3MUY2 71 aa12.3□□□□□ -0.44
CD48-203ENST00000613788 SLC36A1Q7Z2H8 476 aa12.3□□□□□ -0.44
CD48-203ENST00000613788 MED30Q96HR3 178 aa12.3□□□□□ -0.44
CD48-203ENST00000613788 Q96M66 194 aa12.3□□□□□ -0.44
CD48-203ENST00000613788 GAL3ST1Q99999 423 aa12.3□□□□□ -0.44
CD48-203ENST00000613788 TM2D1Q9BX74 207 aa12.3□□□□□ -0.44
CD48-203ENST00000613788 SLIRPQ9GZT3 109 aaKnown RBP12.3□□□□□ -0.44
CD48-203ENST00000613788 IL36RNQ9UBH0 155 aa12.3□□□□□ -0.44
CD48-203ENST00000613788 COMMD3Q9UBI1 195 aa12.3□□□□□ -0.44
CD48-203ENST00000613788 A0A075B6Q4 140 aa12.29□□□□□ -0.44
CD48-203ENST00000613788 IGKV1D-17A0A075B6S4 117 aa12.29□□□□□ -0.44
CD48-203ENST00000613788 NKX6-3A6NJ46 265 aa12.29□□□□□ -0.44
CD48-203ENST00000613788 VWC2LB2RUY7 222 aa12.29□□□□□ -0.44
CD48-203ENST00000613788 TNFRSF13BO14836 293 aaPredicted RBP12.29□□□□□ -0.44
CD48-203ENST00000613788 GEMIN2O14893 280 aaKnown RBP12.29□□□□□ -0.44
CD48-203ENST00000613788 DEGS1O15121 323 aa12.29□□□□□ -0.44
CD48-203ENST00000613788 HAND1O96004 215 aa12.29□□□□□ -0.44
CD48-203ENST00000613788 DUSP1P28562 367 aa12.29□□□□□ -0.44
CD48-203ENST00000613788 ART1P52961 327 aa12.29□□□□□ -0.44
CD48-203ENST00000613788 SCN1BQ07699 218 aa12.29□□□□□ -0.44
CD48-203ENST00000613788 IKZF1Q13422 519 aa12.29□□□□□ -0.44
CD48-203ENST00000613788 TAF9Q16594 264 aa12.29□□□□□ -0.44
CD48-203ENST00000613788 OR5H6Q8NGV6 325 aa12.29□□□□□ -0.44
CD48-203ENST00000613788 MCFD2Q8NI22 146 aa12.29□□□□□ -0.44
CD48-203ENST00000613788 CMTM3Q96MX0 182 aa12.29□□□□□ -0.44
CD48-203ENST00000613788 LPAR5Q9H1C0 372 aa12.29□□□□□ -0.44
CD48-203ENST00000613788 ZNF665Q9H7R5 613 aa12.29□□□□□ -0.44
CD48-203ENST00000613788 MIOXQ9UGB7 285 aa12.29□□□□□ -0.44
CD48-203ENST00000613788 PCDHB10Q9UN67 800 aa12.29□□□□□ -0.44
CD48-203ENST00000613788 ASH1LQ9NR48 2969 aaKnown RBP12.29□□□□□ -0.44
CD48-203ENST00000613788 ARID1AO14497 2285 aa12.29□□□□□ -0.44
CD48-203ENST00000613788 NAV2Q8IVL1 2488 aa12.28□□□□□ -0.44
CD48-203ENST00000613788 IGHV4-30-2A0A087WSY4 118 aa12.28□□□□□ -0.44
CD48-203ENST00000613788 ADAM20O43506 726 aa12.28□□□□□ -0.44
CD48-203ENST00000613788 OR7C1O76099 320 aaPredicted RBP12.28□□□□□ -0.44
CD48-203ENST00000613788 ZNF44P15621 663 aa12.28□□□□□ -0.44
CD48-203ENST00000613788 GABRR1P24046 479 aa12.28□□□□□ -0.44
CD48-203ENST00000613788 PITPNBP48739 271 aa12.28□□□□□ -0.44
CD48-203ENST00000613788 ZNF788Q6ZQV5 615 aa12.28□□□□□ -0.44
CD48-203ENST00000613788 ZNF561Q8N587 486 aa12.28□□□□□ -0.44
CD48-203ENST00000613788 FAM89BQ8N5H3 189 aa12.28□□□□□ -0.44
CD48-203ENST00000613788 CD177Q8N6Q3 437 aa12.28□□□□□ -0.44
CD48-203ENST00000613788 SAMD12Q8N8I0 201 aa12.28□□□□□ -0.44
CD48-203ENST00000613788 CHST4Q8NCG5 386 aa12.28□□□□□ -0.44
CD48-203ENST00000613788 OR56B1Q8NGI3 324 aa12.28□□□□□ -0.44
CD48-203ENST00000613788 PHF21AQ96BD5 680 aa12.28□□□□□ -0.44
CD48-203ENST00000613788 SDSLQ96GA7 329 aa12.28□□□□□ -0.44
CD48-203ENST00000613788 CCL13Q99616 98 aa12.28□□□□□ -0.44
CD48-203ENST00000613788 ATG5Q9H1Y0 275 aa12.28□□□□□ -0.44
CD48-203ENST00000613788 IFT22Q9H7X7 185 aa12.28□□□□□ -0.44
CD48-203ENST00000613788 SPACA1Q9HBV2 294 aa12.28□□□□□ -0.44
CD48-203ENST00000613788 RHBDL2Q9NX52 303 aa12.28□□□□□ -0.44
CD48-203ENST00000613788 KAAG1Q9UBP8 84 aa12.28□□□□□ -0.44
CD48-203ENST00000613788 ZNF222Q9UK12 451 aa12.28□□□□□ -0.44
CD48-203ENST00000613788 CSMD2Q7Z408 3487 aa12.28□□□□□ -0.44
CD48-203ENST00000613788 POLQO75417 2590 aa12.28□□□□□ -0.44
CD48-203ENST00000613788 TMPRSS2O15393 492 aa12.27□□□□□ -0.44
CD48-203ENST00000613788 RGS5O15539 181 aa12.27□□□□□ -0.44
CD48-203ENST00000613788 SCGNO76038 276 aa12.27□□□□□ -0.44
CD48-203ENST00000613788 OR2H2O95918 312 aa12.27□□□□□ -0.44
CD48-203ENST00000613788 LMO1P25800 156 aa12.27□□□□□ -0.44
CD48-203ENST00000613788 EFNB2P52799 333 aa12.27□□□□□ -0.44
CD48-203ENST00000613788 IL13RA1P78552 427 aa12.27□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 59.4 ms