RNA–Protein interactions for RNA: ENST00000612946.4

TTC28-208, Transcript of tetratricopeptide repeat domain 28, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene TTC28, Length 11,274 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC28-208ENST00000612946 ASCL3Q9NQ33 180 aa7.86□□□□□ -1.15
TTC28-208ENST00000612946 TIMM10BQ9Y5J6 103 aa7.86□□□□□ -1.15
TTC28-208ENST00000612946 RUNX2Q13950 521 aa7.86□□□□□ -1.15
TTC28-208ENST00000612946 GPRIN1Q7Z2K8 1008 aa7.86□□□□□ -1.15
TTC28-208ENST00000612946 OR5D18Q8NGL1 313 aa7.86□□□□□ -1.15
TTC28-208ENST00000612946 NGBQ9NPG2 151 aa7.86□□□□□ -1.15
TTC28-208ENST00000612946 OR51B4Q9Y5P0 310 aa7.86□□□□□ -1.15
TTC28-208ENST00000612946 IGLV3-10A0A075B6K4 115 aa7.86□□□□□ -1.15
TTC28-208ENST00000612946 JMJD7P0C870 316 aa7.86□□□□□ -1.15
TTC28-208ENST00000612946 NOVP48745 357 aa7.86□□□□□ -1.15
TTC28-208ENST00000612946 LY6G5CQ5SRR4 150 aa7.86□□□□□ -1.15
TTC28-208ENST00000612946 NUDT11Q96G61 164 aa7.86□□□□□ -1.15
TTC28-208ENST00000612946 CHODLQ9H9P2 273 aa7.86□□□□□ -1.15
TTC28-208ENST00000612946 HOXB2P14652 356 aa7.86□□□□□ -1.15
TTC28-208ENST00000612946 ABHD17CQ6PCB6 329 aa7.86□□□□□ -1.15
TTC28-208ENST00000612946 OSR2Q8N2R0 312 aa7.86□□□□□ -1.15
TTC28-208ENST00000612946 TTC9BQ8N6N2 239 aa7.86□□□□□ -1.15
TTC28-208ENST00000612946 MENTQ9BUN1 341 aa7.86□□□□□ -1.15
TTC28-208ENST00000612946 DNAJC4Q9NNZ3 241 aa7.86□□□□□ -1.15
TTC28-208ENST00000612946 TMEM30AQ9NV96 361 aa7.86□□□□□ -1.15
TTC28-208ENST00000612946 IL19Q9UHD0 177 aa7.86□□□□□ -1.15
TTC28-208ENST00000612946 COL6A6A6NMZ7 2263 aa7.86□□□□□ -1.15
TTC28-208ENST00000612946 HCRTR1O43613 425 aa7.86□□□□□ -1.15
TTC28-208ENST00000612946 MEOX1P50221 254 aa7.86□□□□□ -1.15
TTC28-208ENST00000612946 YBX1P67809 324 aaKnown RBP7.86□□□□□ -1.15
TTC28-208ENST00000612946 TBC1D28Q2M2D7 210 aa7.86□□□□□ -1.15
TTC28-208ENST00000612946 GPR62Q9BZJ7 368 aa7.86□□□□□ -1.15
TTC28-208ENST00000612946 ISG20L2Q9H9L3 353 aaKnown RBP7.86□□□□□ -1.15
TTC28-208ENST00000612946 PRSS56P0CW18 603 aa7.86□□□□□ -1.15
TTC28-208ENST00000612946 EXOSC7Q15024 291 aaKnown RBP7.86□□□□□ -1.15
TTC28-208ENST00000612946 ZNF79Q15937 498 aa7.86□□□□□ -1.15
TTC28-208ENST00000612946 NEUROG1Q92886 237 aa7.86□□□□□ -1.15
TTC28-208ENST00000612946 CNTD2Q9H8S5 307 aa7.86□□□□□ -1.15
TTC28-208ENST00000612946 TARM1B6A8C7 271 aa7.86□□□□□ -1.15
TTC28-208ENST00000612946 CD8AP01732 235 aa7.86□□□□□ -1.15
TTC28-208ENST00000612946 CCL23P55773 120 aa7.86□□□□□ -1.15
TTC28-208ENST00000612946 PSMG3Q9BT73 122 aaPredicted RBP7.86□□□□□ -1.15
TTC28-208ENST00000612946 MYOZ1Q9NP98 299 aaPredicted RBP7.86□□□□□ -1.15
TTC28-208ENST00000612946 ZFP64Q9NPA5 681 aa7.86□□□□□ -1.15
TTC28-208ENST00000612946 OR10AD1Q8NGE0 317 aa7.86□□□□□ -1.15
TTC28-208ENST00000612946 RIF1Q5UIP0 2472 aaKnown RBP7.86□□□□□ -1.15
TTC28-208ENST00000612946 DDX60LQ5H9U9 1706 aaKnown RBP7.86□□□□□ -1.15
TTC28-208ENST00000612946 MRPL33O75394 65 aaKnown RBP7.85□□□□□ -1.15
TTC28-208ENST00000612946 NEURL1O76050 574 aa7.85□□□□□ -1.15
TTC28-208ENST00000612946 EIF3IQ13347 325 aaKnown RBP7.85□□□□□ -1.15
TTC28-208ENST00000612946 VAX1Q5SQQ9 334 aa7.85□□□□□ -1.15
TTC28-208ENST00000612946 C20orf196Q8IYI0 205 aa7.85□□□□□ -1.15
TTC28-208ENST00000612946 TMEM116Q8NCL8 245 aa7.85□□□□□ -1.15
TTC28-208ENST00000612946 OR4F17Q8NGA8 305 aa7.85□□□□□ -1.15
TTC28-208ENST00000612946 ULBP3Q9BZM4 244 aa7.85□□□□□ -1.15
TTC28-208ENST00000612946 MASP2O00187 686 aa7.85□□□□□ -1.15
TTC28-208ENST00000612946 SEC13P55735 322 aa7.85□□□□□ -1.15
TTC28-208ENST00000612946 CLEC12BQ2HXU8 276 aa7.85□□□□□ -1.15
TTC28-208ENST00000612946 CST9Q5W186 159 aa7.85□□□□□ -1.15
TTC28-208ENST00000612946 BCDIN3DQ7Z5W3 292 aaKnown RBP7.85□□□□□ -1.15
TTC28-208ENST00000612946 CBLN4Q9NTU7 201 aa7.85□□□□□ -1.15
TTC28-208ENST00000612946 HPXP02790 462 aa7.85□□□□□ -1.15
TTC28-208ENST00000612946 PGGT1BP53609 377 aa7.85□□□□□ -1.15
TTC28-208ENST00000612946 SGMS2Q8NHU3 365 aa7.85□□□□□ -1.15
TTC28-208ENST00000612946 HIST1H2BAQ96A08 127 aa7.85□□□□□ -1.15
TTC28-208ENST00000612946 TMEM56Q96MV1 263 aa7.85□□□□□ -1.15
TTC28-208ENST00000612946 MRPS18AQ9NVS2 196 aaKnown RBP7.85□□□□□ -1.15
TTC28-208ENST00000612946 ADAM20O43506 726 aa7.85□□□□□ -1.15
TTC28-208ENST00000612946 P01737 135 aa7.85□□□□□ -1.15
TTC28-208ENST00000612946 SHISA4Q96DD7 197 aa7.85□□□□□ -1.15
TTC28-208ENST00000612946 TOX2Q96NM4 488 aa7.85□□□□□ -1.15
TTC28-208ENST00000612946 MBNL1Q9NR56 388 aaKnown RBP7.85□□□□□ -1.15
TTC28-208ENST00000612946 NBASA2RRP1 2371 aa7.85□□□□□ -1.15
TTC28-208ENST00000612946 ZNF117Q03924 483 aa7.85□□□□□ -1.15
TTC28-208ENST00000612946 TNFRSF9Q07011 255 aa7.85□□□□□ -1.15
TTC28-208ENST00000612946 LINC01559Q495D7 138 aa7.85□□□□□ -1.15
TTC28-208ENST00000612946 HES3Q5TGS1 186 aa7.85□□□□□ -1.15
TTC28-208ENST00000612946 ZBTB34Q8NCN2 500 aa7.85□□□□□ -1.15
TTC28-208ENST00000612946 OR2J1Q9GZK6 312 aa7.85□□□□□ -1.15
TTC28-208ENST00000612946 C3orf85A0A1B0GTC6 90 aa7.85□□□□□ -1.15
TTC28-208ENST00000612946 FBLL1A6NHQ2 334 aaKnown RBP7.85□□□□□ -1.15
TTC28-208ENST00000612946 GFYI3L273 518 aa7.85□□□□□ -1.15
TTC28-208ENST00000612946 D2HGDHQ8N465 521 aa7.85□□□□□ -1.15
TTC28-208ENST00000612946 TNFSF15O95150 251 aa7.85□□□□□ -1.15
TTC28-208ENST00000612946 FLT3LGP49771 235 aa7.85□□□□□ -1.15
TTC28-208ENST00000612946 FUT7Q11130 342 aa7.85□□□□□ -1.15
TTC28-208ENST00000612946 Q56UQ5 140 aa7.85□□□□□ -1.15
TTC28-208ENST00000612946 CLDN23Q96B33 292 aa7.85□□□□□ -1.15
TTC28-208ENST00000612946 CES1P1Q9UKY3 287 aa7.85□□□□□ -1.15
TTC28-208ENST00000612946 TCFL5Q9UL49 500 aa7.85□□□□□ -1.15
TTC28-208ENST00000612946 ARFGEF3Q5TH69 2177 aa7.85□□□□□ -1.15
TTC28-208ENST00000612946 PRKRAO75569 313 aaKnown RBP7.85□□□□□ -1.15
TTC28-208ENST00000612946 CST7O76096 145 aa7.85□□□□□ -1.15
TTC28-208ENST00000612946 NTSR1P30989 418 aa7.85□□□□□ -1.15
TTC28-208ENST00000612946 SLC37A1P57057 533 aa7.85□□□□□ -1.15
TTC28-208ENST00000612946 STARD6P59095 220 aa7.85□□□□□ -1.15
TTC28-208ENST00000612946 GAMTQ14353 236 aa7.85□□□□□ -1.15
TTC28-208ENST00000612946 C9orf135Q5VTT2 229 aa7.85□□□□□ -1.15
TTC28-208ENST00000612946 DMKNQ6E0U4 476 aaPredicted RBP7.85□□□□□ -1.15
TTC28-208ENST00000612946 TCF23Q7RTU1 214 aa7.85□□□□□ -1.15
TTC28-208ENST00000612946 TMEM88BA6NKF7 163 aa7.85□□□□□ -1.15
TTC28-208ENST00000612946 PPP1CAP62136 330 aa7.85□□□□□ -1.15
TTC28-208ENST00000612946 PDPNQ86YL7 162 aa7.85□□□□□ -1.15
TTC28-208ENST00000612946 PPP1R3EQ9H7J1 279 aa7.85□□□□□ -1.15
TTC28-208ENST00000612946 ABCA7Q8IZY2 2146 aa7.84□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms