RNA–Protein interactions for RNA: ENST00000610726.4

CSDE1-218, Transcript of cold shock domain containing E1, humanhuman

TSL 5 BASIC

Gene CSDE1, Length 4,312 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-218ENST00000610726 ZNF14P17017 642 aaPredicted RBP6.36□□□□□ -1.39
CSDE1-218ENST00000610726 BCL3P20749 454 aa6.36□□□□□ -1.39
CSDE1-218ENST00000610726 FPR2P25090 351 aa6.36□□□□□ -1.39
CSDE1-218ENST00000610726 SUCLG1P53597 346 aaKnown RBP6.36□□□□□ -1.39
CSDE1-218ENST00000610726 PDZK1IP1Q13113 114 aa6.36□□□□□ -1.39
CSDE1-218ENST00000610726 OR2F1Q13607 317 aa6.36□□□□□ -1.39
CSDE1-218ENST00000610726 SLC39A9Q9NUM3 307 aa6.36□□□□□ -1.39
CSDE1-218ENST00000610726 LIN7CQ9NUP9 197 aaKnown RBP6.36□□□□□ -1.39
CSDE1-218ENST00000610726 ABCD4O14678 606 aa6.35□□□□□ -1.39
CSDE1-218ENST00000610726 TGM6O95932 706 aa6.35□□□□□ -1.39
CSDE1-218ENST00000610726 IGF2P01344 180 aa6.35□□□□□ -1.39
CSDE1-218ENST00000610726 HPXP02790 462 aa6.35□□□□□ -1.39
CSDE1-218ENST00000610726 HEXAP06865 529 aa6.35□□□□□ -1.39
CSDE1-218ENST00000610726 SNRNP70P08621 437 aaKnown RBP6.35□□□□□ -1.39
CSDE1-218ENST00000610726 M6PRP20645 277 aa6.35□□□□□ -1.39
CSDE1-218ENST00000610726 ELLP55199 621 aaPredicted RBP6.35□□□□□ -1.39
CSDE1-218ENST00000610726 PEA15Q15121 130 aa6.35□□□□□ -1.39
CSDE1-218ENST00000610726 FAM74A1Q5RGS3 127 aa6.35□□□□□ -1.39
CSDE1-218ENST00000610726 SLC36A1Q7Z2H8 476 aa6.35□□□□□ -1.39
CSDE1-218ENST00000610726 KCNRGQ8N5I3 272 aa6.35□□□□□ -1.39
CSDE1-218ENST00000610726 SUMF2Q8NBJ7 301 aa6.35□□□□□ -1.39
CSDE1-218ENST00000610726 PXT1Q8NFP0 134 aa6.35□□□□□ -1.39
CSDE1-218ENST00000610726 OR1S2Q8NGQ3 325 aa6.35□□□□□ -1.39
CSDE1-218ENST00000610726 OR2G3Q8NGZ4 309 aa6.35□□□□□ -1.39
CSDE1-218ENST00000610726 VOPP1Q96AW1 172 aa6.35□□□□□ -1.39
CSDE1-218ENST00000610726 MRPS24Q96EL2 167 aaKnown RBP6.35□□□□□ -1.39
CSDE1-218ENST00000610726 OR5B12Q96R08 314 aa6.35□□□□□ -1.39
CSDE1-218ENST00000610726 TIMP4Q99727 224 aa6.35□□□□□ -1.39
CSDE1-218ENST00000610726 HDHD3Q9BSH5 251 aaPredicted RBP6.35□□□□□ -1.39
CSDE1-218ENST00000610726 DLL4Q9NR61 685 aa6.35□□□□□ -1.39
CSDE1-218ENST00000610726 ANXA10Q9UJ72 324 aa6.35□□□□□ -1.39
CSDE1-218ENST00000610726 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP6.35□□□□□ -1.397e-7■■■■■ 28.6
CSDE1-218ENST00000610726 USF3Q68DE3 2245 aa6.35□□□□□ -1.39
CSDE1-218ENST00000610726 SHISA3A0PJX4 238 aa6.35□□□□□ -1.39
CSDE1-218ENST00000610726 M0R1X1 148 aa6.35□□□□□ -1.39
CSDE1-218ENST00000610726 NTN3O00634 580 aaPredicted RBP6.35□□□□□ -1.39
CSDE1-218ENST00000610726 ADAP1O75689 374 aa6.35□□□□□ -1.39
CSDE1-218ENST00000610726 CST7O76096 145 aa6.35□□□□□ -1.39
CSDE1-218ENST00000610726 TPPPO94811 219 aa6.35□□□□□ -1.39
CSDE1-218ENST00000610726 HPNP05981 417 aa6.35□□□□□ -1.39
CSDE1-218ENST00000610726 ADRA2CP18825 462 aa6.35□□□□□ -1.39
CSDE1-218ENST00000610726 S100PP25815 95 aa6.35□□□□□ -1.39
CSDE1-218ENST00000610726 RAB11AP62491 216 aa6.35□□□□□ -1.39
CSDE1-218ENST00000610726 EIF2S3LQ2VIR3 472 aaKnown RBP6.35□□□□□ -1.39
CSDE1-218ENST00000610726 INO80CQ6PI98 192 aaPredicted RBP6.35□□□□□ -1.39
CSDE1-218ENST00000610726 ZDHHC22Q8N966 263 aa6.35□□□□□ -1.39
CSDE1-218ENST00000610726 ZNF680Q8NEM1 530 aa6.35□□□□□ -1.39
CSDE1-218ENST00000610726 SCARB1Q8WTV0 552 aa6.35□□□□□ -1.39
CSDE1-218ENST00000610726 USB1Q9BQ65 265 aaKnown RBP6.35□□□□□ -1.39
CSDE1-218ENST00000610726 PSG11Q9UQ72 335 aa6.35□□□□□ -1.39
CSDE1-218ENST00000610726 FAM208BQ5VWN6 2430 aa6.35□□□□□ -1.39
CSDE1-218ENST00000610726 CEP350Q5VT06 3117 aa6.35□□□□□ -1.39
CSDE1-218ENST00000610726 TRBV5-5A0A0J9YX44 114 aa6.35□□□□□ -1.39
CSDE1-218ENST00000610726 PRR19A6NJB7 356 aa6.35□□□□□ -1.39
CSDE1-218ENST00000610726 C16orf97H3BN30 126 aa6.35□□□□□ -1.39
CSDE1-218ENST00000610726 ICMTO60725 284 aa6.35□□□□□ -1.39
CSDE1-218ENST00000610726 CXCL3P19876 107 aa6.35□□□□□ -1.39
CSDE1-218ENST00000610726 ZBTB25P24278 435 aa6.35□□□□□ -1.39
CSDE1-218ENST00000610726 GNG10P50151 68 aa6.35□□□□□ -1.39
CSDE1-218ENST00000610726 RPS16P62249 146 aaKnown RBP6.35□□□□□ -1.39
CSDE1-218ENST00000610726 SNTB1Q13884 538 aaKnown RBP6.35□□□□□ -1.39
CSDE1-218ENST00000610726 TESK1Q15569 626 aa6.35□□□□□ -1.39
CSDE1-218ENST00000610726 SNAI3Q3KNW1 292 aa6.35□□□□□ -1.39
CSDE1-218ENST00000610726 TMEM211Q6ICI0 200 aa6.35□□□□□ -1.39
CSDE1-218ENST00000610726 MOGAT3Q86VF5 341 aa6.35□□□□□ -1.39
CSDE1-218ENST00000610726 SFT2D1Q8WV19 159 aa6.35□□□□□ -1.39
CSDE1-218ENST00000610726 C10orf35Q96D05 121 aa6.35□□□□□ -1.39
CSDE1-218ENST00000610726 KLHDC3Q9BQ90 382 aa6.35□□□□□ -1.39
CSDE1-218ENST00000610726 AK3Q9UIJ7 227 aa6.35□□□□□ -1.39
CSDE1-218ENST00000610726 PUS1Q9Y606 427 aaKnown RBP eCLIP6.35□□□□□ -1.39
CSDE1-218ENST00000610726 FER1L5A0AVI2 2057 aa6.35□□□□□ -1.39
CSDE1-218ENST00000610726 NDUFB3O43676 98 aa6.34□□□□□ -1.39
CSDE1-218ENST00000610726 HLA-DQB1P01920 261 aa6.34□□□□□ -1.39
CSDE1-218ENST00000610726 KLK2P20151 261 aa6.34□□□□□ -1.39
CSDE1-218ENST00000610726 ZNF362Q5T0B9 420 aaPredicted RBP6.34□□□□□ -1.39
CSDE1-218ENST00000610726 ZNF626Q68DY1 528 aa6.34□□□□□ -1.39
CSDE1-218ENST00000610726 LINC00114Q6XXX2 140 aa6.34□□□□□ -1.39
CSDE1-218ENST00000610726 SLC38A6Q8IZM9 456 aa6.34□□□□□ -1.39
CSDE1-218ENST00000610726 TCTE3Q8IZS6 198 aa6.34□□□□□ -1.39
CSDE1-218ENST00000610726 SHARPINQ9H0F6 387 aa6.34□□□□□ -1.39
CSDE1-218ENST00000610726 CXXC4Q9H2H0 198 aa6.34□□□□□ -1.39
CSDE1-218ENST00000610726 SPG11Q96JI7 2443 aa6.34□□□□□ -1.39
CSDE1-218ENST00000610726 PHF3Q92576 2039 aaKnown RBP6.34□□□□□ -1.39
CSDE1-218ENST00000610726 C9orf170A2RU37 121 aa6.34□□□□□ -1.39
CSDE1-218ENST00000610726 CCL21O00585 134 aa6.34□□□□□ -1.39
CSDE1-218ENST00000610726 CEACAM1P13688 526 aa6.34□□□□□ -1.39
CSDE1-218ENST00000610726 RAG2P55895 527 aa6.34□□□□□ -1.39
CSDE1-218ENST00000610726 EXOSC2Q13868 293 aaKnown RBP6.34□□□□□ -1.39
CSDE1-218ENST00000610726 MOGAT2Q3SYC2 334 aa6.34□□□□□ -1.39
CSDE1-218ENST00000610726 TEX30Q5JUR7 227 aa6.34□□□□□ -1.39
CSDE1-218ENST00000610726 RIPPLY2Q5TAB7 128 aa6.34□□□□□ -1.39
CSDE1-218ENST00000610726 LYG1Q8N1E2 194 aa6.34□□□□□ -1.39
CSDE1-218ENST00000610726 ZBTB44Q8NCP5 570 aa6.34□□□□□ -1.39
CSDE1-218ENST00000610726 OR5A2Q8NGI9 324 aa6.34□□□□□ -1.39
CSDE1-218ENST00000610726 NXF2Q9GZY0 626 aaKnown RBP6.34□□□□□ -1.39
CSDE1-218ENST00000610726 AMDHD2Q9Y303 409 aa6.34□□□□□ -1.39
CSDE1-218ENST00000610726 NOTCH2Q04721 2471 aa6.34□□□□□ -1.39
CSDE1-218ENST00000610726 A0A0U1RQV5 110 aa6.34□□□□□ -1.39
CSDE1-218ENST00000610726 PRR33A8MZF0 331 aa6.34□□□□□ -1.39
CSDE1-218ENST00000610726 E5RGE8 158 aa6.34□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms