RNA–Protein interactions for RNA: ENST00000599699.2

SSBP4-206, Transcript of single stranded DNA binding protein 4, humanhuman

TSL 2 BASIC

Gene SSBP4, Length 793 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-206ENST00000599699 IGKV1-12A0A0C4DH73 117 aa23.18■■□□□ 1.3
SSBP4-206ENST00000599699 K7N7A8 449 aa23.18■■□□□ 1.3
SSBP4-206ENST00000599699 IGKV1D-12P01611 117 aa23.18■■□□□ 1.3
SSBP4-206ENST00000599699 IGHV1-69P01742 117 aa23.18■■□□□ 1.3
SSBP4-206ENST00000599699 YIF1BQ5BJH7 314 aa23.18■■□□□ 1.3
SSBP4-206ENST00000599699 SAXO1Q8IYX7 474 aa23.18■■□□□ 1.3
SSBP4-206ENST00000599699 OR51A2Q8NGJ7 313 aa23.18■■□□□ 1.3
SSBP4-206ENST00000599699 ZFAND2BQ8WV99 257 aa23.18■■□□□ 1.3
SSBP4-206ENST00000599699 MND1Q9BWT6 205 aa23.18■■□□□ 1.3
SSBP4-206ENST00000599699 TPRKBQ9Y3C4 175 aa23.18■■□□□ 1.3
SSBP4-206ENST00000599699 M0R1W7 72 aa23.17■■□□□ 1.3
SSBP4-206ENST00000599699 KDM4BO94953 1096 aa23.17■■□□□ 1.3
SSBP4-206ENST00000599699 CELP19835 753 aa23.17■■□□□ 1.3
SSBP4-206ENST00000599699 PRB3Q04118 309 aaPredicted RBP23.17■■□□□ 1.3
SSBP4-206ENST00000599699 Q8N7P7 452 aa23.17■■□□□ 1.3
SSBP4-206ENST00000599699 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP23.17■■□□□ 1.3
SSBP4-206ENST00000599699 ZDHHC22Q8N966 263 aa23.17■■□□□ 1.3
SSBP4-206ENST00000599699 ZDHHC16Q969W1 377 aa23.17■■□□□ 1.3
SSBP4-206ENST00000599699 DUX5Q96PT3 197 aa23.17■■□□□ 1.3
SSBP4-206ENST00000599699 HMG20AQ9NP66 347 aa23.17■■□□□ 1.3
SSBP4-206ENST00000599699 GSTK1Q9Y2Q3 226 aa23.17■■□□□ 1.3
SSBP4-206ENST00000599699 PCDHGB5Q9Y5G0 923 aa23.17■■□□□ 1.3
SSBP4-206ENST00000599699 MDFIC2A0A1B0GVS7 189 aa23.16■■□□□ 1.3
SSBP4-206ENST00000599699 A0A1W2PPH5 198 aa23.16■■□□□ 1.3
SSBP4-206ENST00000599699 GABRR1P24046 479 aa23.16■■□□□ 1.3
SSBP4-206ENST00000599699 DEFB112Q30KQ8 113 aa23.16■■□□□ 1.3
SSBP4-206ENST00000599699 Q499Y3 187 aa23.16■■□□□ 1.3
SSBP4-206ENST00000599699 SPIN3Q5JUX0 258 aa23.16■■□□□ 1.3
SSBP4-206ENST00000599699 ASPHD2Q6ICH7 369 aa23.16■■□□□ 1.3
SSBP4-206ENST00000599699 ZNF529Q6P280 563 aa23.16■■□□□ 1.3
SSBP4-206ENST00000599699 C1orf122Q6ZSJ8 110 aa23.16■■□□□ 1.3
SSBP4-206ENST00000599699 GDPD3Q7L5L3 318 aa23.16■■□□□ 1.3
SSBP4-206ENST00000599699 ZSCAN4Q8NAM6 433 aaPredicted RBP23.16■■□□□ 1.3
SSBP4-206ENST00000599699 TBC1D15Q8TC07 691 aa23.16■■□□□ 1.3
SSBP4-206ENST00000599699 PGLYRP3Q96LB9 341 aa23.16■■□□□ 1.3
SSBP4-206ENST00000599699 CNBD2Q96M20 576 aa23.16■■□□□ 1.3
SSBP4-206ENST00000599699 METTL8Q9H825 291 aaKnown RBP23.16■■□□□ 1.3
SSBP4-206ENST00000599699 CKLFQ9UBR5 152 aa23.16■■□□□ 1.3
SSBP4-206ENST00000599699 TRBV5-5A0A0J9YX44 114 aa23.15■■□□□ 1.3
SSBP4-206ENST00000599699 DLX1P56177 255 aa23.15■■□□□ 1.3
SSBP4-206ENST00000599699 EDDM3BP56851 147 aa23.15■■□□□ 1.3
SSBP4-206ENST00000599699 ZP1P60852 638 aa23.15■■□□□ 1.3
SSBP4-206ENST00000599699 UBA52P62987 128 aaKnown RBP23.15■■□□□ 1.3
SSBP4-206ENST00000599699 TUSC1Q2TAM9 212 aa23.15■■□□□ 1.3
SSBP4-206ENST00000599699 TMEM200BQ69YZ2 307 aa23.15■■□□□ 1.3
SSBP4-206ENST00000599699 CRIP3Q6Q6R5 217 aa23.15■■□□□ 1.3
SSBP4-206ENST00000599699 OR52N4Q8NGI2 321 aa23.15■■□□□ 1.3
SSBP4-206ENST00000599699 TNFAIP8L1Q8WVP5 186 aa23.15■■□□□ 1.3
SSBP4-206ENST00000599699 SGCDQ92629 289 aa23.15■■□□□ 1.3
SSBP4-206ENST00000599699 ORAI1Q96D31 301 aa23.15■■□□□ 1.3
SSBP4-206ENST00000599699 SNX22Q96L94 193 aa23.15■■□□□ 1.3
SSBP4-206ENST00000599699 CDCA4Q9BXL8 241 aa23.15■■□□□ 1.3
SSBP4-206ENST00000599699 FAM192AQ9GZU8 254 aa23.15■■□□□ 1.3
SSBP4-206ENST00000599699 RHOFQ9HBH0 211 aa23.15■■□□□ 1.3
SSBP4-206ENST00000599699 TMEM138Q9NPI0 162 aa23.15■■□□□ 1.3
SSBP4-206ENST00000599699 PAK1IP1Q9NWT1 392 aaPredicted RBP23.15■■□□□ 1.3
SSBP4-206ENST00000599699 DNAJC9-AS1A6NH13 148 aa23.14■■□□□ 1.29
SSBP4-206ENST00000599699 SH2D1BO14796 132 aa23.14■■□□□ 1.29
SSBP4-206ENST00000599699 ZNF737O75373 536 aa23.14■■□□□ 1.29
SSBP4-206ENST00000599699 ACTG1P63261 375 aa23.14■■□□□ 1.29
SSBP4-206ENST00000599699 ZNF146Q15072 292 aa23.14■■□□□ 1.29
SSBP4-206ENST00000599699 RNLSQ5VYX0 342 aa23.14■■□□□ 1.29
SSBP4-206ENST00000599699 OR8H2Q8N162 312 aa23.14■■□□□ 1.29
SSBP4-206ENST00000599699 OR5D13Q8NGL4 314 aa23.14■■□□□ 1.29
SSBP4-206ENST00000599699 FAM216AQ8WUB2 273 aa23.14■■□□□ 1.29
SSBP4-206ENST00000599699 OR14A2Q96R54 314 aa23.14■■□□□ 1.29
SSBP4-206ENST00000599699 CHST6Q9GZX3 395 aa23.14■■□□□ 1.29
SSBP4-206ENST00000599699 EXOSC4Q9NPD3 245 aaKnown RBP23.14■■□□□ 1.29
SSBP4-206ENST00000599699 TMEM82A0PJX8 343 aa23.13■■□□□ 1.29
SSBP4-206ENST00000599699 SIRPB1O00241 398 aa23.13■■□□□ 1.29
SSBP4-206ENST00000599699 EEF1B2P24534 225 aaKnown RBP23.13■■□□□ 1.29
SSBP4-206ENST00000599699 BDKRB2P30411 391 aa23.13■■□□□ 1.29
SSBP4-206ENST00000599699 VHLP40337 213 aa23.13■■□□□ 1.29
SSBP4-206ENST00000599699 RPS11P62280 158 aaKnown RBP eCLIP23.13■■□□□ 1.29
SSBP4-206ENST00000599699 SLC35A2P78381 396 aa23.13■■□□□ 1.29
SSBP4-206ENST00000599699 GUCA2AQ02747 115 aa23.13■■□□□ 1.29
SSBP4-206ENST00000599699 KLRD1Q13241 179 aa23.13■■□□□ 1.29
SSBP4-206ENST00000599699 EDDM3AQ14507 147 aa23.13■■□□□ 1.29
SSBP4-206ENST00000599699 DDI2Q5TDH0 399 aa23.13■■□□□ 1.29
SSBP4-206ENST00000599699 SEBOXQ9HB31 216 aaPredicted RBP23.13■■□□□ 1.29
SSBP4-206ENST00000599699 A0A1W2PPK0 400 aa23.12■■□□□ 1.29
SSBP4-206ENST00000599699 A0A1W2PRD5 423 aa23.12■■□□□ 1.29
SSBP4-206ENST00000599699 A0A1W2PRF3 423 aa23.12■■□□□ 1.29
SSBP4-206ENST00000599699 A0A1W2PRM7 423 aa23.12■■□□□ 1.29
SSBP4-206ENST00000599699 GABRPO00591 440 aa23.12■■□□□ 1.29
SSBP4-206ENST00000599699 ALDOBP05062 364 aa23.12■■□□□ 1.29
SSBP4-206ENST00000599699 PRTN3P24158 256 aa23.12■■□□□ 1.29
SSBP4-206ENST00000599699 BDH1Q02338 343 aa23.12■■□□□ 1.29
SSBP4-206ENST00000599699 SCN1BQ07699 218 aa23.12■■□□□ 1.29
SSBP4-206ENST00000599699 DOC2BQ14184 412 aa23.12■■□□□ 1.29
SSBP4-206ENST00000599699 MED22Q15528 200 aa23.12■■□□□ 1.29
SSBP4-206ENST00000599699 GRK1Q15835 563 aa23.12■■□□□ 1.29
SSBP4-206ENST00000599699 NCR3LG1Q68D85 454 aa23.12■■□□□ 1.29
SSBP4-206ENST00000599699 METAP1DQ6UB28 335 aaPredicted RBP23.12■■□□□ 1.29
SSBP4-206ENST00000599699 C17orf107Q6ZR85 190 aa23.12■■□□□ 1.29
SSBP4-206ENST00000599699 NKX3-1Q99801 234 aaPredicted RBP23.12■■□□□ 1.29
SSBP4-206ENST00000599699 CCDC90BQ9GZT6 254 aa23.12■■□□□ 1.29
SSBP4-206ENST00000599699 hCG_1809904A0A1W2PP81 198 aa23.11■■□□□ 1.29
SSBP4-206ENST00000599699 A0A1W2PPE2 198 aa23.11■■□□□ 1.29
SSBP4-206ENST00000599699 A0A1W2PR64 198 aa23.11■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms