RNA–Protein interactions for RNA: ENST00000597453.1

TGFB1-202, Transcript of transforming growth factor beta 1, humanhuman

TSL 1 (best)

Gene TGFB1, Length 392 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFB1-202ENST00000597453 AJUBAQ96IF1 538 aa12.36□□□□□ -0.43
TGFB1-202ENST00000597453 COMMD4Q9H0A8 199 aa12.36□□□□□ -0.43
TGFB1-202ENST00000597453 MMP27Q9H306 513 aa12.36□□□□□ -0.43
TGFB1-202ENST00000597453 TCF7L1Q9HCS4 588 aa12.36□□□□□ -0.43
TGFB1-202ENST00000597453 FKBP14Q9NWM8 211 aa12.36□□□□□ -0.43
TGFB1-202ENST00000597453 CHCHD3Q9NX63 227 aaKnown RBP12.36□□□□□ -0.43
TGFB1-202ENST00000597453 TRBV23-1A0A0A0MS06 115 aa12.35□□□□□ -0.43
TGFB1-202ENST00000597453 J3QT63 122 aa12.35□□□□□ -0.43
TGFB1-202ENST00000597453 SYNGR1O43759 233 aa12.35□□□□□ -0.43
TGFB1-202ENST00000597453 TSPAN9O75954 239 aa12.35□□□□□ -0.43
TGFB1-202ENST00000597453 SERPINA3P01011 423 aa12.35□□□□□ -0.43
TGFB1-202ENST00000597453 MYF6P23409 242 aa12.35□□□□□ -0.43
TGFB1-202ENST00000597453 CEBPDP49716 269 aaPredicted RBP12.35□□□□□ -0.43
TGFB1-202ENST00000597453 ACSM1Q08AH1 577 aa12.35□□□□□ -0.43
TGFB1-202ENST00000597453 CDK5R1Q15078 307 aa12.35□□□□□ -0.43
TGFB1-202ENST00000597453 CNN3Q15417 329 aaKnown RBP12.35□□□□□ -0.43
TGFB1-202ENST00000597453 UBE2V2Q15819 145 aa12.35□□□□□ -0.43
TGFB1-202ENST00000597453 RPL22L1Q6P5R6 122 aaKnown RBP12.35□□□□□ -0.43
TGFB1-202ENST00000597453 ACP7Q6ZNF0 438 aa12.35□□□□□ -0.43
TGFB1-202ENST00000597453 AHSA2Q719I0 299 aa12.35□□□□□ -0.43
TGFB1-202ENST00000597453 UTS2BQ765I0 119 aa12.35□□□□□ -0.43
TGFB1-202ENST00000597453 ZNF573Q86YE8 665 aa12.35□□□□□ -0.43
TGFB1-202ENST00000597453 BATF2Q8N1L9 274 aa12.35□□□□□ -0.43
TGFB1-202ENST00000597453 CD177Q8N6Q3 437 aa12.35□□□□□ -0.43
TGFB1-202ENST00000597453 POC1AQ8NBT0 407 aa12.35□□□□□ -0.43
TGFB1-202ENST00000597453 BEND2Q8NDZ0 799 aa12.35□□□□□ -0.43
TGFB1-202ENST00000597453 OR51A4Q8NGJ6 313 aa12.35□□□□□ -0.43
TGFB1-202ENST00000597453 OR13C3Q8NGS6 347 aa12.35□□□□□ -0.43
TGFB1-202ENST00000597453 OR5R1Q8NH85 324 aa12.35□□□□□ -0.43
TGFB1-202ENST00000597453 RPS4Y2Q8TD47 263 aa12.35□□□□□ -0.43
TGFB1-202ENST00000597453 ADAT3Q96EY9 351 aaPredicted RBP12.35□□□□□ -0.43
TGFB1-202ENST00000597453 PPA2Q9H2U2 334 aa12.35□□□□□ -0.43
TGFB1-202ENST00000597453 CLEC2DQ9UHP7 191 aa12.35□□□□□ -0.43
TGFB1-202ENST00000597453 SLC7A11Q9UPY5 501 aa12.35□□□□□ -0.43
TGFB1-202ENST00000597453 POLDIP2Q9Y2S7 368 aa12.35□□□□□ -0.43
TGFB1-202ENST00000597453 TET2Q6N021 2002 aaPredicted RBP12.35□□□□□ -0.43
TGFB1-202ENST00000597453 TRBV2A0A0J9YWF9 115 aa12.34□□□□□ -0.43
TGFB1-202ENST00000597453 RFPL4AA6NLU0 287 aa12.34□□□□□ -0.43
TGFB1-202ENST00000597453 RFPL4AL1F8VTS6 287 aa12.34□□□□□ -0.43
TGFB1-202ENST00000597453 H3BUX3 64 aa12.34□□□□□ -0.43
TGFB1-202ENST00000597453 ANGPTL7O43827 346 aa12.34□□□□□ -0.43
TGFB1-202ENST00000597453 PGA5P0DJD9 388 aa12.34□□□□□ -0.43
TGFB1-202ENST00000597453 ZNF20P17024 532 aa12.34□□□□□ -0.43
TGFB1-202ENST00000597453 MPZP25189 248 aa12.34□□□□□ -0.43
TGFB1-202ENST00000597453 PAX6P26367 422 aa12.34□□□□□ -0.43
TGFB1-202ENST00000597453 TGFBR2P37173 567 aa12.34□□□□□ -0.43
TGFB1-202ENST00000597453 HAAOP46952 286 aa12.34□□□□□ -0.43
TGFB1-202ENST00000597453 CAPZA1P52907 286 aa12.34□□□□□ -0.43
TGFB1-202ENST00000597453 C6orf141Q5SZD1 244 aa12.34□□□□□ -0.43
TGFB1-202ENST00000597453 XAF1Q6GPH4 301 aa12.34□□□□□ -0.43
TGFB1-202ENST00000597453 SLC35E4Q6ICL7 350 aa12.34□□□□□ -0.43
TGFB1-202ENST00000597453 MKXQ8IYA7 352 aa12.34□□□□□ -0.43
TGFB1-202ENST00000597453 STX19Q8N4C7 294 aa12.34□□□□□ -0.43
TGFB1-202ENST00000597453 ZNF485Q8NCK3 441 aa12.34□□□□□ -0.43
TGFB1-202ENST00000597453 PDCD1LG2Q9BQ51 273 aa12.34□□□□□ -0.43
TGFB1-202ENST00000597453 FAM192AQ9GZU8 254 aa12.34□□□□□ -0.43
TGFB1-202ENST00000597453 BABAM2Q9NXR7 383 aa12.34□□□□□ -0.43
TGFB1-202ENST00000597453 RASL12Q9NYN1 266 aa12.34□□□□□ -0.43
TGFB1-202ENST00000597453 DSCAML1Q8TD84 2053 aa12.34□□□□□ -0.43
TGFB1-202ENST00000597453 SLC1A7O00341 560 aa12.33□□□□□ -0.44
TGFB1-202ENST00000597453 FUT6P51993 359 aa12.33□□□□□ -0.44
TGFB1-202ENST00000597453 ERVFRD-1P60508 538 aa12.33□□□□□ -0.44
TGFB1-202ENST00000597453 LY6EQ16553 131 aa12.33□□□□□ -0.44
TGFB1-202ENST00000597453 SMIM21Q3B7S5 101 aa12.33□□□□□ -0.44
TGFB1-202ENST00000597453 C11orf42Q8N5U0 333 aa12.33□□□□□ -0.44
TGFB1-202ENST00000597453 DNAAF1Q8NEP3 725 aa12.33□□□□□ -0.44
TGFB1-202ENST00000597453 OR5D13Q8NGL4 314 aa12.33□□□□□ -0.44
TGFB1-202ENST00000597453 PPP1R35Q8TAP8 253 aa12.33□□□□□ -0.44
TGFB1-202ENST00000597453 TRMT10AQ8TBZ6 339 aaKnown RBP12.33□□□□□ -0.44
TGFB1-202ENST00000597453 FGGYQ96C11 551 aa12.33□□□□□ -0.44
TGFB1-202ENST00000597453 SMIM19Q96E16 107 aa12.33□□□□□ -0.44
TGFB1-202ENST00000597453 SSX3Q99909 188 aa12.33□□□□□ -0.44
TGFB1-202ENST00000597453 PKIBQ9C010 78 aa12.33□□□□□ -0.44
TGFB1-202ENST00000597453 SIGLEC9Q9Y336 463 aa12.33□□□□□ -0.44
TGFB1-202ENST00000597453 SF3B6Q9Y3B4 125 aaKnown RBP12.33□□□□□ -0.44
TGFB1-202ENST00000597453 IGKV1-9A0A0C4DH69 117 aa12.32□□□□□ -0.44
TGFB1-202ENST00000597453 FAM230AA0A1W2PPH8 454 aa12.32□□□□□ -0.44
TGFB1-202ENST00000597453 MYL12BO14950 172 aa12.32□□□□□ -0.44
TGFB1-202ENST00000597453 OGG1O15527 345 aa12.32□□□□□ -0.44
TGFB1-202ENST00000597453 NOS1APO75052 506 aaPredicted RBP12.32□□□□□ -0.44
TGFB1-202ENST00000597453 LALBAP00709 142 aa12.32□□□□□ -0.44
TGFB1-202ENST00000597453 CDK1P06493 297 aa12.32□□□□□ -0.44
TGFB1-202ENST00000597453 ATF1P18846 271 aa12.32□□□□□ -0.44
TGFB1-202ENST00000597453 C21orf33P30042 268 aaPredicted RBP12.32□□□□□ -0.44
TGFB1-202ENST00000597453 PRDX2P32119 198 aa12.32□□□□□ -0.44
TGFB1-202ENST00000597453 TAS2R43P59537 309 aa12.32□□□□□ -0.44
TGFB1-202ENST00000597453 RPL31P62899 125 aaKnown RBP12.32□□□□□ -0.44
TGFB1-202ENST00000597453 IL24Q13007 206 aa12.32□□□□□ -0.44
TGFB1-202ENST00000597453 TMEM200BQ69YZ2 307 aa12.32□□□□□ -0.44
TGFB1-202ENST00000597453 HIST2H2BDQ6DRA6 164 aa12.32□□□□□ -0.44
TGFB1-202ENST00000597453 CALHM1Q8IU99 346 aa12.32□□□□□ -0.44
TGFB1-202ENST00000597453 OR4M1Q8NGD0 313 aa12.32□□□□□ -0.44
TGFB1-202ENST00000597453 RGP1Q92546 391 aaPredicted RBP12.32□□□□□ -0.44
TGFB1-202ENST00000597453 SPSB1Q96BD6 273 aa12.32□□□□□ -0.44
TGFB1-202ENST00000597453 BORCS8Q96FH0 119 aa12.32□□□□□ -0.44
TGFB1-202ENST00000597453 NRIP2Q9BQI9 281 aa12.32□□□□□ -0.44
TGFB1-202ENST00000597453 Q9H521 79 aa12.32□□□□□ -0.44
TGFB1-202ENST00000597453 SCN3BQ9NY72 215 aa12.32□□□□□ -0.44
TGFB1-202ENST00000597453 DHDHQ9UQ10 334 aa12.32□□□□□ -0.44
TGFB1-202ENST00000597453 IGKV1-27A0A075B6S5 117 aa12.31□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 44.4 ms