RNA–Protein interactions for RNA: ENST00000597396.5

SHKBP1-214, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 3

Gene SHKBP1, Length 1,019 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-214ENST00000597396 S100A13Q99584 98 aa16.3■□□□□ 0.2
SHKBP1-214ENST00000597396 NKX3-1Q99801 234 aaPredicted RBP16.3■□□□□ 0.2
SHKBP1-214ENST00000597396 RHOFQ9HBH0 211 aa16.3■□□□□ 0.2
SHKBP1-214ENST00000597396 TCF7L1Q9HCS4 588 aa16.3■□□□□ 0.2
SHKBP1-214ENST00000597396 GLS2Q9UI32 602 aa16.3■□□□□ 0.2
SHKBP1-214ENST00000597396 METRNQ9UJH8 293 aa16.3■□□□□ 0.2
SHKBP1-214ENST00000597396 AUP1Q9Y679 476 aa16.3■□□□□ 0.2
SHKBP1-214ENST00000597396 DNHD1Q96M86 4753 aa16.3■□□□□ 0.2
SHKBP1-214ENST00000597396 ANK3Q12955 4377 aaKnown RBP16.29■□□□□ 0.2
SHKBP1-214ENST00000597396 KIR2DS1A0A191URI9 304 aa16.29■□□□□ 0.2
SHKBP1-214ENST00000597396 MAGEA13PA6NCF6 341 aa16.29■□□□□ 0.2
SHKBP1-214ENST00000597396 RGS9O75916 674 aaPredicted RBP16.29■□□□□ 0.2
SHKBP1-214ENST00000597396 CHRM2P08172 466 aa16.29■□□□□ 0.2
SHKBP1-214ENST00000597396 PSMB9P28065 219 aa16.29■□□□□ 0.2
SHKBP1-214ENST00000597396 OR3A4PP47883 348 aa16.29■□□□□ 0.2
SHKBP1-214ENST00000597396 CAV3P56539 151 aa16.29■□□□□ 0.2
SHKBP1-214ENST00000597396 HSD17B12Q53GQ0 312 aa16.29■□□□□ 0.2
SHKBP1-214ENST00000597396 FAM27D1Q5T7N8 215 aa16.29■□□□□ 0.2
SHKBP1-214ENST00000597396 JAGN1Q8N5M9 183 aa16.29■□□□□ 0.2
SHKBP1-214ENST00000597396 ASCC1Q8N9N2 400 aaKnown RBP16.29■□□□□ 0.2
SHKBP1-214ENST00000597396 HMG20AQ9NP66 347 aa16.29■□□□□ 0.2
SHKBP1-214ENST00000597396 IL36RNQ9UBH0 155 aa16.29■□□□□ 0.2
SHKBP1-214ENST00000597396 DSCAML1Q8TD84 2053 aa16.29■□□□□ 0.2
SHKBP1-214ENST00000597396 HAND1O96004 215 aa16.28■□□□□ 0.2
SHKBP1-214ENST00000597396 AVPP01185 164 aa16.28■□□□□ 0.2
SHKBP1-214ENST00000597396 LIPFP07098 398 aa16.28■□□□□ 0.2
SHKBP1-214ENST00000597396 SFTPBP07988 381 aa16.28■□□□□ 0.2
SHKBP1-214ENST00000597396 GABRA5P31644 462 aa16.28■□□□□ 0.2
SHKBP1-214ENST00000597396 PTGFRP43088 359 aa16.28■□□□□ 0.2
SHKBP1-214ENST00000597396 COL10A1Q03692 680 aa16.28■□□□□ 0.2
SHKBP1-214ENST00000597396 PAX8Q06710 450 aa16.28■□□□□ 0.2
SHKBP1-214ENST00000597396 RSU1Q15404 277 aa16.28■□□□□ 0.2
SHKBP1-214ENST00000597396 UBE2UQ5VVX9 321 aa16.28■□□□□ 0.2
SHKBP1-214ENST00000597396 NKAIN3Q8N8D7 197 aa16.28■□□□□ 0.2
SHKBP1-214ENST00000597396 DACT3Q96B18 629 aaPredicted RBP16.28■□□□□ 0.2
SHKBP1-214ENST00000597396 RPUSD1Q9UJJ7 312 aaKnown RBP16.28■□□□□ 0.2
SHKBP1-214ENST00000597396 ING4Q9UNL4 249 aa16.28■□□□□ 0.2
SHKBP1-214ENST00000597396 GSTK1Q9Y2Q3 226 aa16.28■□□□□ 0.2
SHKBP1-214ENST00000597396 MEGF11A6BM72 1044 aa16.27■□□□□ 0.2
SHKBP1-214ENST00000597396 SC5DO75845 299 aa16.27■□□□□ 0.2
SHKBP1-214ENST00000597396 TNFAIP8O95379 198 aa16.27■□□□□ 0.2
SHKBP1-214ENST00000597396 FAM157CP0CG43 387 aa16.27■□□□□ 0.2
SHKBP1-214ENST00000597396 ADRA2CP18825 462 aa16.27■□□□□ 0.2
SHKBP1-214ENST00000597396 DUSP1P28562 367 aa16.27■□□□□ 0.2
SHKBP1-214ENST00000597396 MTNR1BP49286 362 aa16.27■□□□□ 0.2
SHKBP1-214ENST00000597396 BMXP51813 675 aa16.27■□□□□ 0.2
SHKBP1-214ENST00000597396 SSX1Q16384 188 aa16.27■□□□□ 0.2
SHKBP1-214ENST00000597396 SPIN3Q5JUX0 258 aa16.27■□□□□ 0.2
SHKBP1-214ENST00000597396 C1orf229Q6ZS94 237 aaPredicted RBP16.27■□□□□ 0.2
SHKBP1-214ENST00000597396 C1QL2Q7Z5L3 287 aa16.27■□□□□ 0.2
SHKBP1-214ENST00000597396 DCTN5Q9BTE1 182 aa16.27■□□□□ 0.2
SHKBP1-214ENST00000597396 SLITRK2Q9H156 845 aa16.27■□□□□ 0.2
SHKBP1-214ENST00000597396 EXOSC4Q9NPD3 245 aaKnown RBP16.27■□□□□ 0.2
SHKBP1-214ENST00000597396 OPN4Q9UHM6 478 aa16.27■□□□□ 0.2
SHKBP1-214ENST00000597396 SF3B6Q9Y3B4 125 aaKnown RBP16.27■□□□□ 0.2
SHKBP1-214ENST00000597396 SH2D1BO14796 132 aa16.26■□□□□ 0.19
SHKBP1-214ENST00000597396 CDRT1O95170 752 aa16.26■□□□□ 0.19
SHKBP1-214ENST00000597396 HTR3BO95264 441 aa16.26■□□□□ 0.19
SHKBP1-214ENST00000597396 UCHL1P09936 223 aa16.26■□□□□ 0.19
SHKBP1-214ENST00000597396 PPIAL4GP0DN37 164 aa16.26■□□□□ 0.19
SHKBP1-214ENST00000597396 ZNF146Q15072 292 aa16.26■□□□□ 0.19
SHKBP1-214ENST00000597396 TMEM91Q6ZNR0 172 aa16.26■□□□□ 0.19
SHKBP1-214ENST00000597396 CDH26Q8IXH8 852 aa16.26■□□□□ 0.19
SHKBP1-214ENST00000597396 OR10K1Q8NGX5 313 aa16.26■□□□□ 0.19
SHKBP1-214ENST00000597396 NANPQ8TBE9 248 aa16.26■□□□□ 0.19
SHKBP1-214ENST00000597396 PHYHIPQ92561 330 aa16.26■□□□□ 0.19
SHKBP1-214ENST00000597396 MUL1Q969V5 352 aa16.26■□□□□ 0.19
SHKBP1-214ENST00000597396 FAM234AQ9H0X4 552 aa16.26■□□□□ 0.19
SHKBP1-214ENST00000597396 METTL9Q9H1A3 318 aa16.26■□□□□ 0.19
SHKBP1-214ENST00000597396 A0A1W2PQ09 198 aa16.25■□□□□ 0.19
SHKBP1-214ENST00000597396 CCRL2O00421 344 aa16.25■□□□□ 0.19
SHKBP1-214ENST00000597396 ARL6IP5O75915 188 aa16.25■□□□□ 0.19
SHKBP1-214ENST00000597396 CSTBP04080 98 aaKnown RBP16.25■□□□□ 0.19
SHKBP1-214ENST00000597396 TK1P04183 234 aa16.25■□□□□ 0.19
SHKBP1-214ENST00000597396 SRMP19623 302 aa16.25■□□□□ 0.19
SHKBP1-214ENST00000597396 FGF12P61328 243 aa16.25■□□□□ 0.19
SHKBP1-214ENST00000597396 FABP5Q01469 135 aa16.25■□□□□ 0.19
SHKBP1-214ENST00000597396 ELP2Q6IA86 826 aa16.25■□□□□ 0.19
SHKBP1-214ENST00000597396 ASCL4Q6XD76 172 aa16.25■□□□□ 0.19
SHKBP1-214ENST00000597396 NR1H4Q96RI1 486 aaPredicted RBP16.25■□□□□ 0.19
SHKBP1-214ENST00000597396 CNTD2Q9H8S5 307 aa16.25■□□□□ 0.19
SHKBP1-214ENST00000597396 SEBOXQ9HB31 216 aaPredicted RBP16.25■□□□□ 0.19
SHKBP1-214ENST00000597396 NDUFB11Q9NX14 153 aa16.25■□□□□ 0.19
SHKBP1-214ENST00000597396 MRPS28Q9Y2Q9 187 aaKnown RBP16.25■□□□□ 0.19
SHKBP1-214ENST00000597396 TRBV23-1A0A0A0MS06 115 aa16.24■□□□□ 0.19
SHKBP1-214ENST00000597396 K7N7A8 449 aa16.24■□□□□ 0.19
SHKBP1-214ENST00000597396 SIRPB1O00241 398 aa16.24■□□□□ 0.19
SHKBP1-214ENST00000597396 ZNF44P15621 663 aa16.24■□□□□ 0.19
SHKBP1-214ENST00000597396 SERPINA2P20848 420 aa16.24■□□□□ 0.19
SHKBP1-214ENST00000597396 GABRR1P24046 479 aa16.24■□□□□ 0.19
SHKBP1-214ENST00000597396 GP2P55259 537 aaKnown RBP16.24■□□□□ 0.19
SHKBP1-214ENST00000597396 ARF6P62330 175 aa16.24■□□□□ 0.19
SHKBP1-214ENST00000597396 SCN1BQ07699 218 aa16.24■□□□□ 0.19
SHKBP1-214ENST00000597396 NEDD8Q15843 81 aa16.24■□□□□ 0.19
SHKBP1-214ENST00000597396 METTL11BQ5VVY1 283 aa16.24■□□□□ 0.19
SHKBP1-214ENST00000597396 GLT8D1Q68CQ7 371 aa16.24■□□□□ 0.19
SHKBP1-214ENST00000597396 AWAT2Q6E213 333 aa16.24■□□□□ 0.19
SHKBP1-214ENST00000597396 FAM185AQ8N0U4 392 aa16.24■□□□□ 0.19
SHKBP1-214ENST00000597396 C8orf46Q8TAG6 207 aa16.24■□□□□ 0.19
SHKBP1-214ENST00000597396 PPP1R35Q8TAP8 253 aa16.24■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms