RNA–Protein interactions for RNA: ENST00000595858.5

DDX49-204, Transcript of DEAD-box helicase 49, humanhuman

TSL 1 (best)

Gene DDX49, Length 1,882 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX49-204ENST00000595858 SHISA3A0PJX4 238 aa12.5□□□□□ -0.41
DDX49-204ENST00000595858 CEACAM18A8MTB9 384 aa12.5□□□□□ -0.41
DDX49-204ENST00000595858 GYPAP02724 150 aa12.5□□□□□ -0.41
DDX49-204ENST00000595858 CD37P11049 281 aa12.5□□□□□ -0.41
DDX49-204ENST00000595858 BCL3P20749 454 aa12.5□□□□□ -0.41
DDX49-204ENST00000595858 IL2RGP31785 369 aa12.5□□□□□ -0.41
DDX49-204ENST00000595858 GLT8D1Q68CQ7 371 aa12.5□□□□□ -0.41
DDX49-204ENST00000595858 ASCL4Q6XD76 172 aa12.5□□□□□ -0.41
DDX49-204ENST00000595858 Q8IYB0 196 aa12.5□□□□□ -0.41
DDX49-204ENST00000595858 FOXRED1Q96CU9 486 aaPredicted RBP12.5□□□□□ -0.41
DDX49-204ENST00000595858 UQCC2Q9BRT2 126 aa12.5□□□□□ -0.41
DDX49-204ENST00000595858 PATZ1Q9HBE1 687 aaKnown RBP12.5□□□□□ -0.41
DDX49-204ENST00000595858 NLKQ9UBE8 527 aa12.5□□□□□ -0.41
DDX49-204ENST00000595858 MAST4O15021 2626 aa12.49□□□□□ -0.41
DDX49-204ENST00000595858 SMAD7O15105 426 aaKnown RBP12.49□□□□□ -0.41
DDX49-204ENST00000595858 NDUFA2O43678 99 aa12.49□□□□□ -0.41
DDX49-204ENST00000595858 KDM4BO94953 1096 aa12.49□□□□□ -0.41
DDX49-204ENST00000595858 IGHV2-5P01817 119 aa12.49□□□□□ -0.41
DDX49-204ENST00000595858 SFTPBP07988 381 aa12.49□□□□□ -0.41
DDX49-204ENST00000595858 MYL9P24844 172 aa12.49□□□□□ -0.41
DDX49-204ENST00000595858 SMIM21Q3B7S5 101 aa12.49□□□□□ -0.41
DDX49-204ENST00000595858 LYPD2Q6UXB3 125 aa12.49□□□□□ -0.41
DDX49-204ENST00000595858 AP3S1Q92572 193 aa12.49□□□□□ -0.41
DDX49-204ENST00000595858 KCTD7Q96MP8 289 aa12.49□□□□□ -0.41
DDX49-204ENST00000595858 GFI1Q99684 422 aa12.49□□□□□ -0.41
DDX49-204ENST00000595858 ZNF665Q9H7R5 613 aa12.49□□□□□ -0.41
DDX49-204ENST00000595858 RBFOX1Q9NWB1 397 aaKnown RBP12.49□□□□□ -0.41
DDX49-204ENST00000595858 ING4Q9UNL4 249 aa12.49□□□□□ -0.41
DDX49-204ENST00000595858 AK6Q9Y3D8 172 aaKnown RBP12.49□□□□□ -0.41
DDX49-204ENST00000595858 OR2AT4A6NND4 320 aa12.48□□□□□ -0.41
DDX49-204ENST00000595858 CDRT1O95170 752 aa12.48□□□□□ -0.41
DDX49-204ENST00000595858 WNT2P09544 360 aa12.48□□□□□ -0.41
DDX49-204ENST00000595858 PSG2P11465 335 aa12.48□□□□□ -0.41
DDX49-204ENST00000595858 SCN1BQ07699 218 aa12.48□□□□□ -0.41
DDX49-204ENST00000595858 NDUFA5Q16718 116 aa12.48□□□□□ -0.41
DDX49-204ENST00000595858 ATPAF1Q5TC12 328 aaPredicted RBP12.48□□□□□ -0.41
DDX49-204ENST00000595858 STUMQ69YW2 141 aa12.48□□□□□ -0.41
DDX49-204ENST00000595858 FAM58AQ8N1B3 248 aa12.48□□□□□ -0.41
DDX49-204ENST00000595858 GDPD1Q8N9F7 314 aa12.48□□□□□ -0.41
DDX49-204ENST00000595858 OR4D6Q8NGJ1 314 aa12.48□□□□□ -0.41
DDX49-204ENST00000595858 ANGPTL6Q8NI99 470 aa12.48□□□□□ -0.41
DDX49-204ENST00000595858 RAB39BQ96DA2 213 aa12.48□□□□□ -0.41
DDX49-204ENST00000595858 C18orf12Q96KH6 178 aa12.48□□□□□ -0.41
DDX49-204ENST00000595858 TMUB1Q9BVT8 246 aa12.48□□□□□ -0.41
DDX49-204ENST00000595858 SRRQ9GZT4 340 aa12.48□□□□□ -0.41
DDX49-204ENST00000595858 ELL3Q9HB65 397 aaPredicted RBP12.48□□□□□ -0.41
DDX49-204ENST00000595858 RHOFQ9HBH0 211 aa12.48□□□□□ -0.41
DDX49-204ENST00000595858 MIOXQ9UGB7 285 aa12.48□□□□□ -0.41
DDX49-204ENST00000595858 TBC1D24Q9ULP9 559 aa12.48□□□□□ -0.41
DDX49-204ENST00000595858 MRPS28Q9Y2Q9 187 aaKnown RBP12.48□□□□□ -0.41
DDX49-204ENST00000595858 CR1P17927 2039 aa12.48□□□□□ -0.41
DDX49-204ENST00000595858 IGKV1D-17A0A075B6S4 117 aa12.48□□□□□ -0.41
DDX49-204ENST00000595858 RFPL4AA6NLU0 287 aa12.48□□□□□ -0.41
DDX49-204ENST00000595858 RFPL4AL1F8VTS6 287 aa12.48□□□□□ -0.41
DDX49-204ENST00000595858 HEXAP06865 529 aa12.48□□□□□ -0.41
DDX49-204ENST00000595858 CALCBP10092 127 aa12.48□□□□□ -0.41
DDX49-204ENST00000595858 CD99P14209 185 aa12.48□□□□□ -0.41
DDX49-204ENST00000595858 AMY2BP19961 511 aa12.48□□□□□ -0.41
DDX49-204ENST00000595858 C1orf100Q5SVJ3 147 aa12.48□□□□□ -0.41
DDX49-204ENST00000595858 LAX1Q8IWV1 398 aa12.48□□□□□ -0.41
DDX49-204ENST00000595858 EMG1Q92979 244 aaKnown RBP12.48□□□□□ -0.41
DDX49-204ENST00000595858 S100A13Q99584 98 aa12.48□□□□□ -0.41
DDX49-204ENST00000595858 METTL9Q9H1A3 318 aa12.48□□□□□ -0.41
DDX49-204ENST00000595858 V9GY05 133 aa12.48□□□□□ -0.41
DDX49-204ENST00000595858 ACANP16112 2415 aa12.47□□□□□ -0.41
DDX49-204ENST00000595858 F5H0A9 414 aaPredicted RBP12.47□□□□□ -0.41
DDX49-204ENST00000595858 PDCD5O14737 125 aa12.47□□□□□ -0.41
DDX49-204ENST00000595858 ADAM20O43506 726 aa12.47□□□□□ -0.41
DDX49-204ENST00000595858 CCNKO75909 580 aa12.47□□□□□ -0.41
DDX49-204ENST00000595858 KNG1P01042 644 aa12.47□□□□□ -0.41
DDX49-204ENST00000595858 TRAPPC2P0DI81 140 aa12.47□□□□□ -0.41
DDX49-204ENST00000595858 TRAPPC2BP0DI82 140 aa12.47□□□□□ -0.41
DDX49-204ENST00000595858 IL7P13232 177 aa12.47□□□□□ -0.41
DDX49-204ENST00000595858 RPS2P15880 293 aaKnown RBP12.47□□□□□ -0.41
DDX49-204ENST00000595858 MTNR1BP49286 362 aa12.47□□□□□ -0.41
DDX49-204ENST00000595858 RSU1Q15404 277 aa12.47□□□□□ -0.41
DDX49-204ENST00000595858 ZNF79Q15937 498 aa12.47□□□□□ -0.41
DDX49-204ENST00000595858 TMEM249Q2WGJ8 235 aa12.47□□□□□ -0.41
DDX49-204ENST00000595858 ELP2Q6IA86 826 aa12.47□□□□□ -0.41
DDX49-204ENST00000595858 GLIPR1L1Q6UWM5 242 aa12.47□□□□□ -0.41
DDX49-204ENST00000595858 OR10K1Q8NGX5 313 aa12.47□□□□□ -0.41
DDX49-204ENST00000595858 CCL13Q99616 98 aa12.47□□□□□ -0.41
DDX49-204ENST00000595858 KAAG1Q9UBP8 84 aa12.47□□□□□ -0.41
DDX49-204ENST00000595858 FLNAP21333 2647 aaKnown RBP12.47□□□□□ -0.41
DDX49-204ENST00000595858 YLPM1P49750 1951 aaKnown RBP12.47□□□□□ -0.41
DDX49-204ENST00000595858 TMPRSS2O15393 492 aa12.46□□□□□ -0.41
DDX49-204ENST00000595858 TFF1P04155 84 aa12.46□□□□□ -0.41
DDX49-204ENST00000595858 PRKACAP17612 351 aa12.46□□□□□ -0.41
DDX49-204ENST00000595858 RAB3BP20337 219 aa12.46□□□□□ -0.41
DDX49-204ENST00000595858 CPT2P23786 658 aa12.46□□□□□ -0.41
DDX49-204ENST00000595858 PTBP1P26599 531 aaKnown RBP eCLIP12.46□□□□□ -0.41
DDX49-204ENST00000595858 ASAH1Q13510 395 aa12.46□□□□□ -0.41
DDX49-204ENST00000595858 AWAT2Q6E213 333 aa12.46□□□□□ -0.41
DDX49-204ENST00000595858 ZNF788Q6ZQV5 615 aa12.46□□□□□ -0.41
DDX49-204ENST00000595858 NRARPQ7Z6K4 114 aa12.46□□□□□ -0.41
DDX49-204ENST00000595858 TPRA1Q86W33 373 aa12.46□□□□□ -0.41
DDX49-204ENST00000595858 Q8NFD4 153 aa12.46□□□□□ -0.41
DDX49-204ENST00000595858 NEIL1Q96FI4 390 aaPredicted RBP12.46□□□□□ -0.41
DDX49-204ENST00000595858 DNTTIP1Q9H147 329 aa12.46□□□□□ -0.41
DDX49-204ENST00000595858 IL36GQ9NZH8 169 aa12.46□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms