RNA–Protein interactions for RNA: ENST00000595101.5

USE1-206, Transcript of unconventional SNARE in the ER 1, humanhuman

TSL 2 BASIC

Gene USE1, Length 1,776 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USE1-206ENST00000595101 GABRPO00591 440 aa12.66□□□□□ -0.38
USE1-206ENST00000595101 KDM4BO94953 1096 aa12.66□□□□□ -0.38
USE1-206ENST00000595101 IFNA2P01563 188 aa12.66□□□□□ -0.38
USE1-206ENST00000595101 HSMCR30P0CW71 290 aa12.66□□□□□ -0.38
USE1-206ENST00000595101 TMEM225BP0DP42 221 aa12.66□□□□□ -0.38
USE1-206ENST00000595101 EEF1B2P24534 225 aaKnown RBP12.66□□□□□ -0.38
USE1-206ENST00000595101 OR3A4PP47883 348 aa12.66□□□□□ -0.38
USE1-206ENST00000595101 GP2P55259 537 aaKnown RBP12.66□□□□□ -0.38
USE1-206ENST00000595101 CAV3P56539 151 aa12.66□□□□□ -0.38
USE1-206ENST00000595101 ERVFRD-1P60508 538 aa12.66□□□□□ -0.38
USE1-206ENST00000595101 BDH1Q02338 343 aa12.66□□□□□ -0.38
USE1-206ENST00000595101 RBM48Q5RL73 367 aaKnown RBP12.66□□□□□ -0.38
USE1-206ENST00000595101 PDZD9Q8IXQ8 264 aa12.66□□□□□ -0.38
USE1-206ENST00000595101 OR10K1Q8NGX5 313 aa12.66□□□□□ -0.38
USE1-206ENST00000595101 WDFY2Q96P53 400 aa12.66□□□□□ -0.38
USE1-206ENST00000595101 DERL3Q96Q80 235 aa12.66□□□□□ -0.38
USE1-206ENST00000595101 SLC6A7Q99884 636 aa12.66□□□□□ -0.38
USE1-206ENST00000595101 SIRPDQ9H106 197 aa12.66□□□□□ -0.38
USE1-206ENST00000595101 HMG20AQ9NP66 347 aa12.66□□□□□ -0.38
USE1-206ENST00000595101 NOX4Q9NPH5 578 aa12.66□□□□□ -0.38
USE1-206ENST00000595101 ONECUT1Q9UBC0 465 aa12.66□□□□□ -0.38
USE1-206ENST00000595101 GSTK1Q9Y2Q3 226 aa12.66□□□□□ -0.38
USE1-206ENST00000595101 TMEM82A0PJX8 343 aa12.66□□□□□ -0.38
USE1-206ENST00000595101 PSPNO60542 156 aa12.66□□□□□ -0.38
USE1-206ENST00000595101 ZNF737O75373 536 aa12.66□□□□□ -0.38
USE1-206ENST00000595101 TOX4O94842 621 aa12.66□□□□□ -0.38
USE1-206ENST00000595101 ECDO95905 644 aaPredicted RBP12.66□□□□□ -0.38
USE1-206ENST00000595101 TK1P04183 234 aa12.66□□□□□ -0.38
USE1-206ENST00000595101 CD1AP06126 327 aa12.66□□□□□ -0.38
USE1-206ENST00000595101 TGFBR2P37173 567 aa12.66□□□□□ -0.38
USE1-206ENST00000595101 KRTAP21-3Q3LHN1 58 aa12.66□□□□□ -0.38
USE1-206ENST00000595101 BRD3OSQ6XYD6 125 aa12.66□□□□□ -0.38
USE1-206ENST00000595101 ZNF561Q8N587 486 aa12.66□□□□□ -0.38
USE1-206ENST00000595101 Q8N7P7 452 aa12.66□□□□□ -0.38
USE1-206ENST00000595101 ASCC1Q8N9N2 400 aaKnown RBP12.66□□□□□ -0.38
USE1-206ENST00000595101 PNLDC1Q8NA58 520 aaKnown RBP12.66□□□□□ -0.38
USE1-206ENST00000595101 TMEM203Q969S6 136 aa12.66□□□□□ -0.38
USE1-206ENST00000595101 PPIL3Q9H2H8 161 aaKnown RBP12.66□□□□□ -0.38
USE1-206ENST00000595101 CDRT1O95170 752 aa12.65□□□□□ -0.38
USE1-206ENST00000595101 HAND1O96004 215 aa12.65□□□□□ -0.38
USE1-206ENST00000595101 CYB5AP00167 134 aa12.65□□□□□ -0.38
USE1-206ENST00000595101 MAS1P04201 325 aa12.65□□□□□ -0.38
USE1-206ENST00000595101 LIPFP07098 398 aa12.65□□□□□ -0.38
USE1-206ENST00000595101 DDI2Q5TDH0 399 aa12.65□□□□□ -0.38
USE1-206ENST00000595101 RUSC1-AS1Q66K80 236 aa12.65□□□□□ -0.38
USE1-206ENST00000595101 METAP1DQ6UB28 335 aaPredicted RBP12.65□□□□□ -0.38
USE1-206ENST00000595101 C17orf107Q6ZR85 190 aa12.65□□□□□ -0.38
USE1-206ENST00000595101 C8orf46Q8TAG6 207 aa12.65□□□□□ -0.38
USE1-206ENST00000595101 TNFAIP8L1Q8WVP5 186 aa12.65□□□□□ -0.38
USE1-206ENST00000595101 GPER1Q99527 375 aa12.65□□□□□ -0.38
USE1-206ENST00000595101 CHST6Q9GZX3 395 aa12.65□□□□□ -0.38
USE1-206ENST00000595101 TMEM138Q9NPI0 162 aa12.65□□□□□ -0.38
USE1-206ENST00000595101 SIRT7Q9NRC8 400 aa12.65□□□□□ -0.38
USE1-206ENST00000595101 ZNF581Q9P0T4 197 aa12.65□□□□□ -0.38
USE1-206ENST00000595101 NUP50Q9UKX7 468 aa12.65□□□□□ -0.38
USE1-206ENST00000595101 K7N7A8 449 aa12.64□□□□□ -0.39
USE1-206ENST00000595101 VENTXO95231 258 aa12.64□□□□□ -0.39
USE1-206ENST00000595101 BDKRB2P30411 391 aa12.64□□□□□ -0.39
USE1-206ENST00000595101 PPP3R1P63098 170 aa12.64□□□□□ -0.39
USE1-206ENST00000595101 ZNF146Q15072 292 aa12.64□□□□□ -0.39
USE1-206ENST00000595101 ACSM3Q53FZ2 586 aa12.64□□□□□ -0.39
USE1-206ENST00000595101 TPRX1Q8N7U7 411 aa12.64□□□□□ -0.39
USE1-206ENST00000595101 ZNF48Q96MX3 618 aaPredicted RBP12.64□□□□□ -0.39
USE1-206ENST00000595101 FAM192AQ9GZU8 254 aa12.64□□□□□ -0.39
USE1-206ENST00000595101 CENPVL3A0A0U1RRI6 287 aa12.64□□□□□ -0.39
USE1-206ENST00000595101 GPR37O15354 613 aa12.64□□□□□ -0.39
USE1-206ENST00000595101 MAGEB3O15480 346 aa12.64□□□□□ -0.39
USE1-206ENST00000595101 ALDOBP05062 364 aa12.64□□□□□ -0.39
USE1-206ENST00000595101 ZNF93P35789 620 aaPredicted RBP12.64□□□□□ -0.39
USE1-206ENST00000595101 PTGFRP43088 359 aa12.64□□□□□ -0.39
USE1-206ENST00000595101 RPS25P62851 125 aaKnown RBP12.64□□□□□ -0.39
USE1-206ENST00000595101 METTL11BQ5VVY1 283 aa12.64□□□□□ -0.39
USE1-206ENST00000595101 TMEM200BQ69YZ2 307 aa12.64□□□□□ -0.39
USE1-206ENST00000595101 UNQ9370/PRO34162Q6UXP9 181 aa12.64□□□□□ -0.39
USE1-206ENST00000595101 VMO1Q7Z5L0 202 aa12.64□□□□□ -0.39
USE1-206ENST00000595101 Q8IYB0 196 aa12.64□□□□□ -0.39
USE1-206ENST00000595101 FAM185AQ8N0U4 392 aa12.64□□□□□ -0.39
USE1-206ENST00000595101 COL6A5A8TX70 2615 aa12.63□□□□□ -0.39
USE1-206ENST00000595101 MDFIC2A0A1B0GVS7 189 aa12.63□□□□□ -0.39
USE1-206ENST00000595101 A0A1W2PQ09 198 aa12.63□□□□□ -0.39
USE1-206ENST00000595101 TRIM64CA6NLI5 447 aa12.63□□□□□ -0.39
USE1-206ENST00000595101 SIRPB1O00241 398 aa12.63□□□□□ -0.39
USE1-206ENST00000595101 GPX5O75715 221 aa12.63□□□□□ -0.39
USE1-206ENST00000595101 SC5DO75845 299 aa12.63□□□□□ -0.39
USE1-206ENST00000595101 OR2H2O95918 312 aa12.63□□□□□ -0.39
USE1-206ENST00000595101 CHRM2P08172 466 aa12.63□□□□□ -0.39
USE1-206ENST00000595101 FSTP19883 344 aa12.63□□□□□ -0.39
USE1-206ENST00000595101 EMX1Q04741 257 aaPredicted RBP12.63□□□□□ -0.39
USE1-206ENST00000595101 SCN1BQ07699 218 aa12.63□□□□□ -0.39
USE1-206ENST00000595101 ZNF273Q14593 569 aa12.63□□□□□ -0.39
USE1-206ENST00000595101 SAXO1Q8IYX7 474 aa12.63□□□□□ -0.39
USE1-206ENST00000595101 ZSCAN4Q8NAM6 433 aaPredicted RBP12.63□□□□□ -0.39
USE1-206ENST00000595101 OR4S1Q8NGB4 309 aa12.63□□□□□ -0.39
USE1-206ENST00000595101 LHX4Q969G2 390 aa12.63□□□□□ -0.39
USE1-206ENST00000595101 NR1H4Q96RI1 486 aaPredicted RBP12.63□□□□□ -0.39
USE1-206ENST00000595101 MGLLQ99685 303 aa12.63□□□□□ -0.39
USE1-206ENST00000595101 ACOT13Q9NPJ3 140 aa12.63□□□□□ -0.39
USE1-206ENST00000595101 ESM1Q9NQ30 184 aa12.63□□□□□ -0.39
USE1-206ENST00000595101 A0A1W2PP11 408 aa12.62□□□□□ -0.39
USE1-206ENST00000595101 CCL3L1P16619 93 aa12.62□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms