RNA–Protein interactions for RNA: ENST00000594973.5

SHKBP1-205, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 2

Gene SHKBP1, Length 2,339 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-205ENST00000594973 YIF1AO95070 293 aa14.88□□□□□ -0.03
SHKBP1-205ENST00000594973 DBHP09172 617 aa14.88□□□□□ -0.03
SHKBP1-205ENST00000594973 ZNF133P52736 654 aaPredicted RBP14.88□□□□□ -0.03
SHKBP1-205ENST00000594973 PMPCAQ10713 525 aa14.88□□□□□ -0.03
SHKBP1-205ENST00000594973 KCTD9Q7L273 389 aa14.88□□□□□ -0.03
SHKBP1-205ENST00000594973 AAED1Q7RTV5 226 aa14.88□□□□□ -0.03
SHKBP1-205ENST00000594973 S100PBPQ96BU1 408 aa14.88□□□□□ -0.03
SHKBP1-205ENST00000594973 RYDENQ9NUL5 291 aaKnown RBP14.88□□□□□ -0.03
SHKBP1-205ENST00000594973 RHBDD3Q9Y3P4 386 aa14.88□□□□□ -0.03
SHKBP1-205ENST00000594973 SEC14L6B5MCN3 397 aa14.87□□□□□ -0.03
SHKBP1-205ENST00000594973 TSTD3H0UI37 97 aa14.87□□□□□ -0.03
SHKBP1-205ENST00000594973 H0YIZ8 118 aa14.87□□□□□ -0.03
SHKBP1-205ENST00000594973 M0R036 132 aa14.87□□□□□ -0.03
SHKBP1-205ENST00000594973 SULT1A1P50225 295 aa14.87□□□□□ -0.03
SHKBP1-205ENST00000594973 SLC22A24Q8N4F4 322 aa14.87□□□□□ -0.03
SHKBP1-205ENST00000594973 SLC5A7Q9GZV3 580 aa14.87□□□□□ -0.03
SHKBP1-205ENST00000594973 ZNF703Q9H7S9 590 aaPredicted RBP14.87□□□□□ -0.03
SHKBP1-205ENST00000594973 TP53TG5Q9Y2B4 290 aa14.87□□□□□ -0.03
SHKBP1-205ENST00000594973 C13orf42A0A1B0GVH6 325 aa14.87□□□□□ -0.03
SHKBP1-205ENST00000594973 LDLRAD4O15165 306 aa14.87□□□□□ -0.03
SHKBP1-205ENST00000594973 EFSO43281 561 aa14.87□□□□□ -0.03
SHKBP1-205ENST00000594973 LIPCP11150 499 aa14.87□□□□□ -0.03
SHKBP1-205ENST00000594973 PAX1P15863 534 aa14.87□□□□□ -0.03
SHKBP1-205ENST00000594973 ZNF93P35789 620 aaPredicted RBP14.87□□□□□ -0.03
SHKBP1-205ENST00000594973 MAGEA5P43359 124 aa14.87□□□□□ -0.03
SHKBP1-205ENST00000594973 RNASE10Q5GAN6 216 aaKnown RBP14.87□□□□□ -0.03
SHKBP1-205ENST00000594973 FOXL2NBQ6ZUU3 175 aa14.87□□□□□ -0.03
SHKBP1-205ENST00000594973 ZNF584Q8IVC4 421 aa14.87□□□□□ -0.03
SHKBP1-205ENST00000594973 DEFB124Q8NES8 71 aa14.87□□□□□ -0.03
SHKBP1-205ENST00000594973 PARD6AQ9NPB6 346 aa14.87□□□□□ -0.03
SHKBP1-205ENST00000594973 KIAA1549Q9HCM3 1950 aa14.86□□□□□ -0.03
SHKBP1-205ENST00000594973 BTBD17A6NE02 478 aa14.86□□□□□ -0.03
SHKBP1-205ENST00000594973 B4GALT1P15291 398 aa14.86□□□□□ -0.03
SHKBP1-205ENST00000594973 TAS2R31P59538 309 aa14.86□□□□□ -0.03
SHKBP1-205ENST00000594973 HEPN1Q6WQI6 88 aa14.86□□□□□ -0.03
SHKBP1-205ENST00000594973 YPEL4Q96NS1 127 aa14.86□□□□□ -0.03
SHKBP1-205ENST00000594973 BCO1Q9HAY6 547 aa14.86□□□□□ -0.03
SHKBP1-205ENST00000594973 TAF9BQ9HBM6 251 aa14.86□□□□□ -0.03
SHKBP1-205ENST00000594973 FAM86C1Q9NVL1 165 aa14.86□□□□□ -0.03
SHKBP1-205ENST00000594973 B4GALT7Q9UBV7 327 aa14.86□□□□□ -0.03
SHKBP1-205ENST00000594973 MRPS18CQ9Y3D5 142 aaKnown RBP14.86□□□□□ -0.03
SHKBP1-205ENST00000594973 URB1O60287 2271 aaKnown RBP14.86□□□□□ -0.03
SHKBP1-205ENST00000594973 MSGN1A6NI15 193 aa14.86□□□□□ -0.03
SHKBP1-205ENST00000594973 AGPAT2O15120 278 aa14.86□□□□□ -0.03
SHKBP1-205ENST00000594973 IGHV3-9P01782 118 aa14.86□□□□□ -0.03
SHKBP1-205ENST00000594973 PATE4P0C8F1 98 aa14.86□□□□□ -0.03
SHKBP1-205ENST00000594973 CEACAM6P40199 344 aa14.86□□□□□ -0.03
SHKBP1-205ENST00000594973 MRPS34P82930 218 aaKnown RBP14.86□□□□□ -0.03
SHKBP1-205ENST00000594973 RSPO1Q2MKA7 263 aaPredicted RBP14.86□□□□□ -0.03
SHKBP1-205ENST00000594973 ABLIM2Q6H8Q1 611 aa14.86□□□□□ -0.03
SHKBP1-205ENST00000594973 DOK3Q7L591 496 aa14.86□□□□□ -0.03
SHKBP1-205ENST00000594973 GPR137CQ8N3F9 429 aa14.86□□□□□ -0.03
SHKBP1-205ENST00000594973 CASTOR1Q8WTX7 329 aa14.86□□□□□ -0.03
SHKBP1-205ENST00000594973 CMBLQ96DG6 245 aa14.86□□□□□ -0.03
SHKBP1-205ENST00000594973 TTTY12Q9BZ98 90 aa14.86□□□□□ -0.03
SHKBP1-205ENST00000594973 TMED3Q9Y3Q3 217 aa14.86□□□□□ -0.03
SHKBP1-205ENST00000594973 A0A087X0M5 115 aa14.85□□□□□ -0.03
SHKBP1-205ENST00000594973 SPAARA0A1B0GVQ0 90 aa14.85□□□□□ -0.03
SHKBP1-205ENST00000594973 A0A1B0GX30 115 aa14.85□□□□□ -0.03
SHKBP1-205ENST00000594973 SERPINA5P05154 406 aa14.85□□□□□ -0.03
SHKBP1-205ENST00000594973 ERCC1P07992 297 aaPredicted RBP14.85□□□□□ -0.03
SHKBP1-205ENST00000594973 HCKP08631 526 aa14.85□□□□□ -0.03
SHKBP1-205ENST00000594973 VAMP1P23763 118 aa14.85□□□□□ -0.03
SHKBP1-205ENST00000594973 UCP2P55851 309 aa14.85□□□□□ -0.03
SHKBP1-205ENST00000594973 UNC119Q13432 240 aa14.85□□□□□ -0.03
SHKBP1-205ENST00000594973 FAM27BQ5VT28 67 aa14.85□□□□□ -0.03
SHKBP1-205ENST00000594973 ZNF529Q6P280 563 aa14.85□□□□□ -0.03
SHKBP1-205ENST00000594973 MRGPRFQ96AM1 343 aa14.85□□□□□ -0.03
SHKBP1-205ENST00000594973 LYZL4Q96KX0 146 aa14.85□□□□□ -0.03
SHKBP1-205ENST00000594973 OR2S2Q9NQN1 319 aa14.85□□□□□ -0.03
SHKBP1-205ENST00000594973 KLK13Q9UKR3 277 aa14.85□□□□□ -0.03
SHKBP1-205ENST00000594973 CNOT1A5YKK6 2376 aaKnown RBP14.85□□□□□ -0.03
SHKBP1-205ENST00000594973 TMEM235A6NFC5 223 aa14.84□□□□□ -0.03
SHKBP1-205ENST00000594973 RPL36A-HNRNPH2H7BZ11 118 aa14.84□□□□□ -0.03
SHKBP1-205ENST00000594973 M0R135 149 aa14.84□□□□□ -0.03
SHKBP1-205ENST00000594973 CSTBP04080 98 aaKnown RBP14.84□□□□□ -0.03
SHKBP1-205ENST00000594973 VSIG8P0DPA2 414 aa14.84□□□□□ -0.03
SHKBP1-205ENST00000594973 CDPF1Q6NVV7 123 aa14.84□□□□□ -0.03
SHKBP1-205ENST00000594973 GALNTL5Q7Z4T8 443 aa14.84□□□□□ -0.03
SHKBP1-205ENST00000594973 ZNF101Q8IZC7 436 aa14.84□□□□□ -0.03
SHKBP1-205ENST00000594973 OR5AS1Q8N127 324 aa14.84□□□□□ -0.03
SHKBP1-205ENST00000594973 ZNF799Q96GE5 643 aa14.84□□□□□ -0.03
SHKBP1-205ENST00000594973 FAM186AA6NE01 2351 aa14.84□□□□□ -0.03
SHKBP1-205ENST00000594973 LAMA5O15230 3695 aa14.84□□□□□ -0.03
SHKBP1-205ENST00000594973 TCAPO15273 167 aa14.84□□□□□ -0.03
SHKBP1-205ENST00000594973 PET100P0DJ07 73 aa14.84□□□□□ -0.03
SHKBP1-205ENST00000594973 CTSSP25774 331 aa14.84□□□□□ -0.03
SHKBP1-205ENST00000594973 PLGLB1Q02325 96 aa14.84□□□□□ -0.03
SHKBP1-205ENST00000594973 Q6ZRG5 221 aa14.84□□□□□ -0.03
SHKBP1-205ENST00000594973 DTX1Q86Y01 620 aa14.84□□□□□ -0.03
SHKBP1-205ENST00000594973 CHST4Q8NCG5 386 aa14.84□□□□□ -0.03
SHKBP1-205ENST00000594973 NPRL2Q8WTW4 380 aa14.84□□□□□ -0.03
SHKBP1-205ENST00000594973 RAB18Q9NP72 206 aa14.84□□□□□ -0.03
SHKBP1-205ENST00000594973 RAB22AQ9UL26 194 aa14.84□□□□□ -0.03
SHKBP1-205ENST00000594973 ELOA3CA0A087WX78 387 aaPredicted RBP14.83□□□□□ -0.03
SHKBP1-205ENST00000594973 CST4P01036 141 aa14.83□□□□□ -0.03
SHKBP1-205ENST00000594973 OR8U9P0C7N5 309 aa14.83□□□□□ -0.03
SHKBP1-205ENST00000594973 DAOP14920 347 aa14.83□□□□□ -0.03
SHKBP1-205ENST00000594973 CCL1P22362 96 aa14.83□□□□□ -0.03
SHKBP1-205ENST00000594973 OR3A4PP47883 348 aa14.83□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 8.2 ms