RNA–Protein interactions for RNA: ENST00000591383.1

VPS4B-205, Transcript of vacuolar protein sorting 4 homolog B, humanhuman

TSL 5

Gene VPS4B, Length 701 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS4B-205ENST00000591383 PTBP3O95758 552 aaKnown RBP5.36□□□□□ -1.55
VPS4B-205ENST00000591383 CYB5AP00167 134 aa5.36□□□□□ -1.55
VPS4B-205ENST00000591383 IGHV2-70P01814 119 aa5.36□□□□□ -1.55
VPS4B-205ENST00000591383 MAS1P04201 325 aa5.36□□□□□ -1.55
VPS4B-205ENST00000591383 HEXAP06865 529 aa5.36□□□□□ -1.55
VPS4B-205ENST00000591383 PCMT1P22061 227 aa5.36□□□□□ -1.55
VPS4B-205ENST00000591383 USF1P22415 310 aaPredicted RBP5.36□□□□□ -1.55
VPS4B-205ENST00000591383 MYL9P24844 172 aa5.36□□□□□ -1.55
VPS4B-205ENST00000591383 GIFP27352 417 aa5.36□□□□□ -1.55
VPS4B-205ENST00000591383 CALRP27797 417 aaKnown RBP5.36□□□□□ -1.55
VPS4B-205ENST00000591383 MDH2P40926 338 aaKnown RBP5.36□□□□□ -1.55
VPS4B-205ENST00000591383 PMELP40967 661 aa5.36□□□□□ -1.55
VPS4B-205ENST00000591383 RBP2P50120 134 aa5.36□□□□□ -1.55
VPS4B-205ENST00000591383 FUT6P51993 359 aa5.36□□□□□ -1.55
VPS4B-205ENST00000591383 ZNF134P52741 427 aa5.36□□□□□ -1.55
VPS4B-205ENST00000591383 ATP1B3P54709 279 aa5.36□□□□□ -1.55
VPS4B-205ENST00000591383 RPS11P62280 158 aaKnown RBP eCLIP5.36□□□□□ -1.55
VPS4B-205ENST00000591383 FABP5Q01469 135 aa5.36□□□□□ -1.55
VPS4B-205ENST00000591383 TPBGQ13641 420 aa5.36□□□□□ -1.55
VPS4B-205ENST00000591383 TRAM1Q15629 374 aa5.36□□□□□ -1.55
VPS4B-205ENST00000591383 SMIM21Q3B7S5 101 aa5.36□□□□□ -1.55
VPS4B-205ENST00000591383 ACSM3Q53FZ2 586 aa5.36□□□□□ -1.55
VPS4B-205ENST00000591383 HSD17B12Q53GQ0 312 aa5.36□□□□□ -1.55
VPS4B-205ENST00000591383 SFRP4Q6FHJ7 346 aaPredicted RBP5.36□□□□□ -1.55
VPS4B-205ENST00000591383 ASPHD2Q6ICH7 369 aa5.36□□□□□ -1.55
VPS4B-205ENST00000591383 DNM1P46Q6ZS02 220 aa5.36□□□□□ -1.55
VPS4B-205ENST00000591383 Q6ZSR3 168 aa5.36□□□□□ -1.55
VPS4B-205ENST00000591383 SLC25A26Q70HW3 274 aa5.36□□□□□ -1.55
VPS4B-205ENST00000591383 CEACAM19Q7Z692 300 aa5.36□□□□□ -1.55
VPS4B-205ENST00000591383 ANGPTL5Q86XS5 388 aa5.36□□□□□ -1.55
VPS4B-205ENST00000591383 CALHM1Q8IU99 346 aa5.36□□□□□ -1.55
VPS4B-205ENST00000591383 SERPINA12Q8IW75 414 aa5.36□□□□□ -1.55
VPS4B-205ENST00000591383 PHC2Q8IXK0 858 aa5.36□□□□□ -1.55
VPS4B-205ENST00000591383 MUC20Q8N307 709 aaPredicted RBP5.36□□□□□ -1.55
VPS4B-205ENST00000591383 SPICQ8N5J4 248 aa5.36□□□□□ -1.55
VPS4B-205ENST00000591383 JAGN1Q8N5M9 183 aa5.36□□□□□ -1.55
VPS4B-205ENST00000591383 MS4A15Q8N5U1 240 aa5.36□□□□□ -1.55
VPS4B-205ENST00000591383 PARP16Q8N5Y8 322 aa5.36□□□□□ -1.55
VPS4B-205ENST00000591383 PNLDC1Q8NA58 520 aaKnown RBP5.36□□□□□ -1.55
VPS4B-205ENST00000591383 DNAAF1Q8NEP3 725 aa5.36□□□□□ -1.55
VPS4B-205ENST00000591383 OR5D14Q8NGL3 314 aa5.36□□□□□ -1.55
VPS4B-205ENST00000591383 CLDND2Q8NHS1 167 aa5.36□□□□□ -1.55
VPS4B-205ENST00000591383 TNFAIP8L1Q8WVP5 186 aa5.36□□□□□ -1.55
VPS4B-205ENST00000591383 AQP3Q92482 292 aa5.36□□□□□ -1.55
VPS4B-205ENST00000591383 EMG1Q92979 244 aaKnown RBP5.36□□□□□ -1.55
VPS4B-205ENST00000591383 ITFG2Q969R8 447 aa5.36□□□□□ -1.55
VPS4B-205ENST00000591383 ERGIC1Q969X5 290 aa5.36□□□□□ -1.55
VPS4B-205ENST00000591383 RAB39BQ96DA2 213 aa5.36□□□□□ -1.55
VPS4B-205ENST00000591383 NR1H4Q96RI1 486 aaPredicted RBP5.36□□□□□ -1.55
VPS4B-205ENST00000591383 MRPS26Q9BYN8 205 aaKnown RBP5.36□□□□□ -1.55
VPS4B-205ENST00000591383 REG4Q9BYZ8 158 aa5.36□□□□□ -1.55
VPS4B-205ENST00000591383 SLITRK2Q9H156 845 aa5.36□□□□□ -1.55
VPS4B-205ENST00000591383 TLNRD1Q9H1K6 362 aa5.36□□□□□ -1.55
VPS4B-205ENST00000591383 OR51I2Q9H344 312 aa5.36□□□□□ -1.55
VPS4B-205ENST00000591383 LPAR2Q9HBW0 351 aa5.36□□□□□ -1.55
VPS4B-205ENST00000591383 ISYNA1Q9NPH2 558 aa5.36□□□□□ -1.55
VPS4B-205ENST00000591383 SNTG1Q9NSN8 517 aa5.36□□□□□ -1.55
VPS4B-205ENST00000591383 ZNF469Q96JG9 3925 aaPredicted RBP5.36□□□□□ -1.55
VPS4B-205ENST00000591383 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP5.36□□□□□ -1.555e-6■■■■□ 22.8
VPS4B-205ENST00000591383 MTORP42345 2549 aa5.36□□□□□ -1.55
VPS4B-205ENST00000591383 NSD1Q96L73 2696 aaPredicted RBP5.36□□□□□ -1.55
VPS4B-205ENST00000591383 PPIAL4EA0A075B759 164 aa5.35□□□□□ -1.55
VPS4B-205ENST00000591383 SMIM30A4D0T7 59 aa5.35□□□□□ -1.55
VPS4B-205ENST00000591383 CEACAM18A8MTB9 384 aa5.35□□□□□ -1.55
VPS4B-205ENST00000591383 VWC2LB2RUY7 222 aa5.35□□□□□ -1.55
VPS4B-205ENST00000591383 PPIAL4DF5H284 164 aa5.35□□□□□ -1.55
VPS4B-205ENST00000591383 TRAPPC2LH3BP13 241 aa5.35□□□□□ -1.55
VPS4B-205ENST00000591383 LGALS8O00214 317 aa5.35□□□□□ -1.55
VPS4B-205ENST00000591383 ADAM20O43506 726 aa5.35□□□□□ -1.55
VPS4B-205ENST00000591383 ARL6IP5O75915 188 aa5.35□□□□□ -1.55
VPS4B-205ENST00000591383 GYPAP02724 150 aa5.35□□□□□ -1.55
VPS4B-205ENST00000591383 TFF1P04155 84 aa5.35□□□□□ -1.55
VPS4B-205ENST00000591383 PGA5P0DJD9 388 aa5.35□□□□□ -1.55
VPS4B-205ENST00000591383 PPIAL4FP0DN26 164 aa5.35□□□□□ -1.55
VPS4B-205ENST00000591383 TMEM225BP0DP42 221 aa5.35□□□□□ -1.55
VPS4B-205ENST00000591383 CALCBP10092 127 aa5.35□□□□□ -1.55
VPS4B-205ENST00000591383 BCL3P20749 454 aa5.35□□□□□ -1.55
VPS4B-205ENST00000591383 GLRA1P23415 457 aa5.35□□□□□ -1.55
VPS4B-205ENST00000591383 GCSHP23434 173 aa5.35□□□□□ -1.55
VPS4B-205ENST00000591383 GADD45AP24522 165 aa5.35□□□□□ -1.55
VPS4B-205ENST00000591383 BDKRB2P30411 391 aa5.35□□□□□ -1.55
VPS4B-205ENST00000591383 IL2RGP31785 369 aa5.35□□□□□ -1.55
VPS4B-205ENST00000591383 TGFBR2P37173 567 aa5.35□□□□□ -1.55
VPS4B-205ENST00000591383 OR3A4PP47883 348 aa5.35□□□□□ -1.55
VPS4B-205ENST00000591383 CEBPDP49716 269 aaPredicted RBP5.35□□□□□ -1.55
VPS4B-205ENST00000591383 CAPZA1P52907 286 aa5.35□□□□□ -1.55
VPS4B-205ENST00000591383 TMEM33P57088 247 aa5.35□□□□□ -1.55
VPS4B-205ENST00000591383 VAMP2P63027 116 aa5.35□□□□□ -1.55
VPS4B-205ENST00000591383 KISS1Q15726 138 aa5.35□□□□□ -1.55
VPS4B-205ENST00000591383 KCNJ8Q15842 424 aa5.35□□□□□ -1.55
VPS4B-205ENST00000591383 ZNF181Q2M3W8 571 aa5.35□□□□□ -1.55
VPS4B-205ENST00000591383 AWAT2Q6E213 333 aa5.35□□□□□ -1.55
VPS4B-205ENST00000591383 C22orf42Q6IC83 251 aa5.35□□□□□ -1.55
VPS4B-205ENST00000591383 FIP1L1Q6UN15 594 aaKnown RBP5.35□□□□□ -1.55
VPS4B-205ENST00000591383 C16orf54Q6UWD8 224 aa5.35□□□□□ -1.55
VPS4B-205ENST00000591383 SPNS3Q6ZMD2 512 aa5.35□□□□□ -1.55
VPS4B-205ENST00000591383 RNF144BQ7Z419 303 aa5.35□□□□□ -1.55
VPS4B-205ENST00000591383 CIARTQ8N365 385 aaPredicted RBP5.35□□□□□ -1.55
VPS4B-205ENST00000591383 GCSAMQ8N6F7 178 aa5.35□□□□□ -1.55
VPS4B-205ENST00000591383 FAM216BQ8N7L0 139 aa5.35□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms