RNA–Protein interactions for RNA: ENST00000591126.5

SMAD4-212, Transcript of SMAD family member 4, humanhuman

TSL 1 (best)

Gene SMAD4, Length 4,970 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-212ENST00000591126 OR10A7Q8NGE5 316 aa5.47□□□□□ -1.53
SMAD4-212ENST00000591126 ITLN1Q8WWA0 313 aa5.47□□□□□ -1.53
SMAD4-212ENST00000591126 OR2A7Q96R45 310 aa5.47□□□□□ -1.53
SMAD4-212ENST00000591126 METTL17Q9H7H0 456 aaPredicted RBP5.47□□□□□ -1.53
SMAD4-212ENST00000591126 TMEFF2Q9UIK5 374 aaPredicted RBP5.47□□□□□ -1.53
SMAD4-212ENST00000591126 KCNE3Q9Y6H6 103 aa5.47□□□□□ -1.53
SMAD4-212ENST00000591126 MED19A0JLT2 244 aaPredicted RBP5.47□□□□□ -1.53
SMAD4-212ENST00000591126 RAB27BO00194 218 aa5.47□□□□□ -1.53
SMAD4-212ENST00000591126 GCSHP23434 173 aa5.47□□□□□ -1.53
SMAD4-212ENST00000591126 CCL8P80075 99 aa5.47□□□□□ -1.53
SMAD4-212ENST00000591126 LIAT1Q6ZQX7 453 aa5.47□□□□□ -1.53
SMAD4-212ENST00000591126 SLC16A12Q6ZSM3 486 aa5.47□□□□□ -1.53
SMAD4-212ENST00000591126 TMEM158Q8WZ71 300 aa5.47□□□□□ -1.53
SMAD4-212ENST00000591126 TMEM147Q9BVK8 224 aa5.47□□□□□ -1.53
SMAD4-212ENST00000591126 AAMDCQ9H7C9 122 aa5.47□□□□□ -1.53
SMAD4-212ENST00000591126 MED20Q9H944 212 aa5.47□□□□□ -1.53
SMAD4-212ENST00000591126 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP5.47□□□□□ -1.53
SMAD4-212ENST00000591126 PRSS50Q9UI38 385 aa5.47□□□□□ -1.53
SMAD4-212ENST00000591126 UGT2A1Q9Y4X1 527 aa5.47□□□□□ -1.53
SMAD4-212ENST00000591126 TET1Q8NFU7 2136 aa5.47□□□□□ -1.53
SMAD4-212ENST00000591126 J3QRK9 145 aa5.47□□□□□ -1.53
SMAD4-212ENST00000591126 NUPL2O15504 423 aaKnown RBP5.47□□□□□ -1.53
SMAD4-212ENST00000591126 PGA4P0DJD7 388 aa5.47□□□□□ -1.53
SMAD4-212ENST00000591126 PGA3P0DJD8 388 aa5.47□□□□□ -1.53
SMAD4-212ENST00000591126 GABRA4P48169 554 aa5.47□□□□□ -1.53
SMAD4-212ENST00000591126 BTG1P62324 171 aa5.47□□□□□ -1.53
SMAD4-212ENST00000591126 CDK5Q00535 292 aa5.47□□□□□ -1.53
SMAD4-212ENST00000591126 TMEM155Q4W5P6 130 aa5.47□□□□□ -1.53
SMAD4-212ENST00000591126 LRRC75A-AS1Q8N1F1 130 aa5.47□□□□□ -1.53
SMAD4-212ENST00000591126 C9orf106Q8NAJ2 232 aa5.47□□□□□ -1.53
SMAD4-212ENST00000591126 OR5D18Q8NGL1 313 aa5.47□□□□□ -1.53
SMAD4-212ENST00000591126 FYTTD1Q96QD9 318 aaKnown RBP5.47□□□□□ -1.53
SMAD4-212ENST00000591126 CHST5Q9GZS9 411 aa5.47□□□□□ -1.53
SMAD4-212ENST00000591126 HSPB6O14558 160 aa5.46□□□□□ -1.53
SMAD4-212ENST00000591126 FABP7O15540 132 aa5.46□□□□□ -1.53
SMAD4-212ENST00000591126 ASAH2BP0C7U1 165 aa5.46□□□□□ -1.53
SMAD4-212ENST00000591126 DUSP1P28562 367 aa5.46□□□□□ -1.53
SMAD4-212ENST00000591126 NUTF2P61970 127 aaKnown RBP5.46□□□□□ -1.53
SMAD4-212ENST00000591126 FAM27E3Q08E93 113 aa5.46□□□□□ -1.53
SMAD4-212ENST00000591126 FAM27D1Q5T7N8 215 aa5.46□□□□□ -1.53
SMAD4-212ENST00000591126 LINC00299Q6ZSB3 139 aa5.46□□□□□ -1.53
SMAD4-212ENST00000591126 FAM219AQ8IW50 185 aa5.46□□□□□ -1.53
SMAD4-212ENST00000591126 MMD2Q8IY49 270 aa5.46□□□□□ -1.53
SMAD4-212ENST00000591126 DPCDQ9BVM2 203 aaPredicted RBP5.46□□□□□ -1.53
SMAD4-212ENST00000591126 HIF1ANQ9NWT6 349 aa5.46□□□□□ -1.53
SMAD4-212ENST00000591126 UPK3AO75631 287 aa5.46□□□□□ -1.54
SMAD4-212ENST00000591126 SBK3P0C264 359 aa5.46□□□□□ -1.54
SMAD4-212ENST00000591126 OR8U9P0C7N5 309 aa5.46□□□□□ -1.54
SMAD4-212ENST00000591126 BLOC1S1P78537 153 aa5.46□□□□□ -1.54
SMAD4-212ENST00000591126 C12orf73Q69YU5 71 aa5.46□□□□□ -1.54
SMAD4-212ENST00000591126 OR4A4PQ8NGN8 299 aa5.46□□□□□ -1.54
SMAD4-212ENST00000591126 KLF14Q8TD94 323 aaPredicted RBP5.46□□□□□ -1.54
SMAD4-212ENST00000591126 ADAMTS17Q8TE56 1095 aa5.46□□□□□ -1.54
SMAD4-212ENST00000591126 Q8WTZ3 238 aa5.46□□□□□ -1.54
SMAD4-212ENST00000591126 STRAPQ9Y3F4 350 aaKnown RBP5.46□□□□□ -1.54
SMAD4-212ENST00000591126 MYO18AQ92614 2054 aaKnown RBP5.46□□□□□ -1.54
SMAD4-212ENST00000591126 THADAQ6YHU6 1953 aa5.46□□□□□ -1.54
SMAD4-212ENST00000591126 ZSCAN5BA6NJL1 495 aa5.46□□□□□ -1.54
SMAD4-212ENST00000591126 LRRC3CA6NJW4 275 aa5.46□□□□□ -1.54
SMAD4-212ENST00000591126 TCF21O43680 179 aa5.46□□□□□ -1.54
SMAD4-212ENST00000591126 CST4P01036 141 aa5.46□□□□□ -1.54
SMAD4-212ENST00000591126 ALOX5APP20292 161 aa5.46□□□□□ -1.54
SMAD4-212ENST00000591126 ACAA2P42765 397 aaKnown RBP5.46□□□□□ -1.54
SMAD4-212ENST00000591126 PSG4Q00888 419 aa5.46□□□□□ -1.54
SMAD4-212ENST00000591126 RHEBQ15382 184 aa5.46□□□□□ -1.54
SMAD4-212ENST00000591126 ATPAF1Q5TC12 328 aaPredicted RBP5.46□□□□□ -1.54
SMAD4-212ENST00000591126 ANKRD13BQ86YJ7 626 aa5.46□□□□□ -1.54
SMAD4-212ENST00000591126 TMEM52Q8NDY8 209 aa5.46□□□□□ -1.54
SMAD4-212ENST00000591126 OR1L4Q8NGR5 311 aa5.46□□□□□ -1.54
SMAD4-212ENST00000591126 GRPEL2Q8TAA5 225 aa5.46□□□□□ -1.54
SMAD4-212ENST00000591126 C14orf79Q96F83 325 aa5.46□□□□□ -1.54
SMAD4-212ENST00000591126 DMRTB1Q96MA1 342 aa5.46□□□□□ -1.54
SMAD4-212ENST00000591126 TMEM208Q9BTX3 173 aa5.46□□□□□ -1.54
SMAD4-212ENST00000591126 SYNPO2LQ9H987 977 aa5.46□□□□□ -1.54
SMAD4-212ENST00000591126 G6PC2Q9NQR9 355 aa5.46□□□□□ -1.54
SMAD4-212ENST00000591126 COA4Q9NYJ1 87 aa5.46□□□□□ -1.54
SMAD4-212ENST00000591126 FBXL17Q9UF56 701 aa5.46□□□□□ -1.54
SMAD4-212ENST00000591126 EXOGQ9Y2C4 368 aaKnown RBP5.46□□□□□ -1.54
SMAD4-212ENST00000591126 UTRNP46939 3433 aa5.46□□□□□ -1.54
SMAD4-212ENST00000591126 SIAH2O43255 324 aa5.46□□□□□ -1.54
SMAD4-212ENST00000591126 MS4A2Q01362 244 aa5.46□□□□□ -1.54
SMAD4-212ENST00000591126 GK2Q14410 553 aaPredicted RBP5.46□□□□□ -1.54
SMAD4-212ENST00000591126 IZUMO4Q1ZYL8 232 aa5.46□□□□□ -1.54
SMAD4-212ENST00000591126 FAM76BQ5HYJ3 339 aa5.46□□□□□ -1.54
SMAD4-212ENST00000591126 Q5PR19 223 aa5.46□□□□□ -1.54
SMAD4-212ENST00000591126 CLEC9AQ6UXN8 241 aa5.46□□□□□ -1.54
SMAD4-212ENST00000591126 RBM45Q8IUH3 476 aaKnown RBP5.46□□□□□ -1.54
SMAD4-212ENST00000591126 COMMD1Q8N668 190 aa5.46□□□□□ -1.54
SMAD4-212ENST00000591126 OR4F17Q8NGA8 305 aa5.46□□□□□ -1.54
SMAD4-212ENST00000591126 OR1S2Q8NGQ3 325 aa5.46□□□□□ -1.54
SMAD4-212ENST00000591126 ZNF385AQ96PM9 386 aaKnown RBP5.46□□□□□ -1.54
SMAD4-212ENST00000591126 OR4F4Q96R69 305 aa5.46□□□□□ -1.54
SMAD4-212ENST00000591126 NIPSNAP1Q9BPW8 284 aa5.46□□□□□ -1.54
SMAD4-212ENST00000591126 IDI2-AS1Q9NZ38 188 aa5.46□□□□□ -1.54
SMAD4-212ENST00000591126 OPN4Q9UHM6 478 aa5.46□□□□□ -1.54
SMAD4-212ENST00000591126 ZNF107Q9UII5 783 aaPredicted RBP5.46□□□□□ -1.54
SMAD4-212ENST00000591126 FZR1Q9UM11 496 aa5.46□□□□□ -1.54
SMAD4-212ENST00000591126 WASHC3Q9Y3C0 194 aa5.46□□□□□ -1.54
SMAD4-212ENST00000591126 PCYT1BQ9Y5K3 369 aaPredicted RBP5.46□□□□□ -1.54
SMAD4-212ENST00000591126 IGHV2OR16-5A0A0B4J2B6 119 aa5.45□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 45.9 ms