RNA–Protein interactions for RNA: ENST00000589201.1

LINC00654-202, long intergenic non-protein coding RNA 654, humanhuman

TSL 3 BASIC

Gene LINC00654, Length 579 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00654-202ENST00000589201 SNU13P55769 128 aaKnown RBP16.3■□□□□ 0.2
LINC00654-202ENST00000589201 DOC2BQ14184 412 aa16.3■□□□□ 0.2
LINC00654-202ENST00000589201 TMEM200BQ69YZ2 307 aa16.3■□□□□ 0.2
LINC00654-202ENST00000589201 METAP1DQ6UB28 335 aaPredicted RBP16.3■□□□□ 0.2
LINC00654-202ENST00000589201 TMEM106AQ96A25 262 aa16.3■□□□□ 0.2
LINC00654-202ENST00000589201 PRDM13Q9H4Q3 707 aa16.3■□□□□ 0.2
LINC00654-202ENST00000589201 HMG20AQ9NP66 347 aa16.3■□□□□ 0.2
LINC00654-202ENST00000589201 TMEM82A0PJX8 343 aa16.29■□□□□ 0.2
LINC00654-202ENST00000589201 RNASEK-C17orf49H0YIS7 233 aa16.29■□□□□ 0.2
LINC00654-202ENST00000589201 KDM4BO94953 1096 aa16.29■□□□□ 0.2
LINC00654-202ENST00000589201 HAND1O96004 215 aa16.29■□□□□ 0.2
LINC00654-202ENST00000589201 CDK1P06493 297 aa16.29■□□□□ 0.2
LINC00654-202ENST00000589201 CD2P06729 351 aa16.29■□□□□ 0.2
LINC00654-202ENST00000589201 ZP1P60852 638 aa16.29■□□□□ 0.2
LINC00654-202ENST00000589201 KLRD1Q13241 179 aa16.29■□□□□ 0.2
LINC00654-202ENST00000589201 ZNF146Q15072 292 aa16.29■□□□□ 0.2
LINC00654-202ENST00000589201 SLC9A3R2Q15599 337 aa16.29■□□□□ 0.2
LINC00654-202ENST00000589201 FIP1L1Q6UN15 594 aaKnown RBP16.29■□□□□ 0.2
LINC00654-202ENST00000589201 SAXO1Q8IYX7 474 aa16.29■□□□□ 0.2
LINC00654-202ENST00000589201 PIP4P2Q8N4L2 257 aa16.29■□□□□ 0.2
LINC00654-202ENST00000589201 NANOGP1Q8N7R0 232 aa16.29■□□□□ 0.2
LINC00654-202ENST00000589201 TNFRSF14Q92956 283 aa16.29■□□□□ 0.2
LINC00654-202ENST00000589201 ZDHHC16Q969W1 377 aa16.29■□□□□ 0.2
LINC00654-202ENST00000589201 ORAI1Q96D31 301 aa16.29■□□□□ 0.2
LINC00654-202ENST00000589201 PGLYRP3Q96LB9 341 aa16.29■□□□□ 0.2
LINC00654-202ENST00000589201 VCX3BQ9H321 246 aa16.29■□□□□ 0.2
LINC00654-202ENST00000589201 SEBOXQ9HB31 216 aaPredicted RBP16.29■□□□□ 0.2
LINC00654-202ENST00000589201 PNMA8CA0A1B0GUJ8 204 aa16.28■□□□□ 0.2
LINC00654-202ENST00000589201 MYL12BO14950 172 aa16.28■□□□□ 0.2
LINC00654-202ENST00000589201 MAGEB3O15480 346 aa16.28■□□□□ 0.2
LINC00654-202ENST00000589201 TMEM225BP0DP42 221 aa16.28■□□□□ 0.2
LINC00654-202ENST00000589201 MYF6P23409 242 aa16.28■□□□□ 0.2
LINC00654-202ENST00000589201 WNT4P56705 351 aa16.28■□□□□ 0.2
LINC00654-202ENST00000589201 RPS11P62280 158 aaKnown RBP eCLIP16.28■□□□□ 0.2
LINC00654-202ENST00000589201 BLMHQ13867 455 aa16.28■□□□□ 0.2
LINC00654-202ENST00000589201 C17orf107Q6ZR85 190 aa16.28■□□□□ 0.2
LINC00654-202ENST00000589201 SATL1Q86VE3 508 aa16.28■□□□□ 0.2
LINC00654-202ENST00000589201 ZSCAN4Q8NAM6 433 aaPredicted RBP16.28■□□□□ 0.2
LINC00654-202ENST00000589201 OR52N4Q8NGI2 321 aa16.28■□□□□ 0.2
LINC00654-202ENST00000589201 SGCDQ92629 289 aa16.28■□□□□ 0.2
LINC00654-202ENST00000589201 SNX22Q96L94 193 aa16.28■□□□□ 0.2
LINC00654-202ENST00000589201 METTL8Q9H825 291 aaKnown RBP16.28■□□□□ 0.2
LINC00654-202ENST00000589201 UNKLQ9H9P5 680 aaKnown RBP16.28■□□□□ 0.2
LINC00654-202ENST00000589201 ERGIC3Q9Y282 383 aa16.28■□□□□ 0.2
LINC00654-202ENST00000589201 GSTK1Q9Y2Q3 226 aa16.28■□□□□ 0.2
LINC00654-202ENST00000589201 TRBV5-5A0A0J9YX44 114 aa16.27■□□□□ 0.2
LINC00654-202ENST00000589201 A0A0U1RQK1 487 aa16.27■□□□□ 0.2
LINC00654-202ENST00000589201 A0A1W2PRD5 423 aa16.27■□□□□ 0.2
LINC00654-202ENST00000589201 A0A1W2PRF3 423 aa16.27■□□□□ 0.2
LINC00654-202ENST00000589201 A0A1W2PRM7 423 aa16.27■□□□□ 0.2
LINC00654-202ENST00000589201 HOXA3O43365 443 aaPredicted RBP16.27■□□□□ 0.2
LINC00654-202ENST00000589201 TAS2R43P59537 309 aa16.27■□□□□ 0.2
LINC00654-202ENST00000589201 ACTG1P63261 375 aa16.27■□□□□ 0.2
LINC00654-202ENST00000589201 ZNF273Q14593 569 aa16.27■□□□□ 0.2
LINC00654-202ENST00000589201 YIF1BQ5BJH7 314 aa16.27■□□□□ 0.2
LINC00654-202ENST00000589201 SPIN3Q5JUX0 258 aa16.27■□□□□ 0.2
LINC00654-202ENST00000589201 IZUMO2Q6UXV1 221 aa16.27■□□□□ 0.2
LINC00654-202ENST00000589201 Q6YL49 198 aa16.27■□□□□ 0.2
LINC00654-202ENST00000589201 OR8H2Q8N162 312 aa16.27■□□□□ 0.2
LINC00654-202ENST00000589201 C11orf42Q8N5U0 333 aa16.27■□□□□ 0.2
LINC00654-202ENST00000589201 OR5D13Q8NGL4 314 aa16.27■□□□□ 0.2
LINC00654-202ENST00000589201 TBC1D15Q8TC07 691 aa16.27■□□□□ 0.2
LINC00654-202ENST00000589201 GPER1Q99527 375 aa16.27■□□□□ 0.2
LINC00654-202ENST00000589201 PAK1IP1Q9NWT1 392 aaPredicted RBP16.27■□□□□ 0.2
LINC00654-202ENST00000589201 SCN3BQ9NY72 215 aa16.27■□□□□ 0.2
LINC00654-202ENST00000589201 GLS2Q9UI32 602 aa16.27■□□□□ 0.2
LINC00654-202ENST00000589201 A0A1W2PPH5 198 aa16.26■□□□□ 0.19
LINC00654-202ENST00000589201 MEX3AA1L020 520 aaKnown RBP16.26■□□□□ 0.19
LINC00654-202ENST00000589201 CLDN34H7C241 214 aa16.26■□□□□ 0.19
LINC00654-202ENST00000589201 PSPNO60542 156 aa16.26■□□□□ 0.19
LINC00654-202ENST00000589201 CCL3L1P16619 93 aa16.26■□□□□ 0.19
LINC00654-202ENST00000589201 CELP19835 753 aa16.26■□□□□ 0.19
LINC00654-202ENST00000589201 GABRR1P24046 479 aa16.26■□□□□ 0.19
LINC00654-202ENST00000589201 EDDM3BP56851 147 aa16.26■□□□□ 0.19
LINC00654-202ENST00000589201 ERVFRD-1P60508 538 aa16.26■□□□□ 0.19
LINC00654-202ENST00000589201 GUCA2AQ02747 115 aa16.26■□□□□ 0.19
LINC00654-202ENST00000589201 Q499Y3 187 aa16.26■□□□□ 0.19
LINC00654-202ENST00000589201 RNLSQ5VYX0 342 aa16.26■□□□□ 0.19
LINC00654-202ENST00000589201 GDPD3Q7L5L3 318 aa16.26■□□□□ 0.19
LINC00654-202ENST00000589201 PNKDQ8N490 385 aa16.26■□□□□ 0.19
LINC00654-202ENST00000589201 GCDHQ92947 438 aaPredicted RBP16.26■□□□□ 0.19
LINC00654-202ENST00000589201 MYDGFQ969H8 173 aa16.26■□□□□ 0.19
LINC00654-202ENST00000589201 SLC25A28Q96A46 364 aa16.26■□□□□ 0.19
LINC00654-202ENST00000589201 NKX3-1Q99801 234 aaPredicted RBP16.26■□□□□ 0.19
LINC00654-202ENST00000589201 ANKRD60Q9BZ19 345 aa16.26■□□□□ 0.19
LINC00654-202ENST00000589201 CHST6Q9GZX3 395 aa16.26■□□□□ 0.19
LINC00654-202ENST00000589201 ZMAT3Q9HA38 289 aaKnown RBP16.26■□□□□ 0.19
LINC00654-202ENST00000589201 RHOFQ9HBH0 211 aa16.26■□□□□ 0.19
LINC00654-202ENST00000589201 NOX4Q9NPH5 578 aa16.26■□□□□ 0.19
LINC00654-202ENST00000589201 TMEM89A2RUT3 159 aa16.25■□□□□ 0.19
LINC00654-202ENST00000589201 SIRPB1O00241 398 aa16.25■□□□□ 0.19
LINC00654-202ENST00000589201 GABRPO00591 440 aa16.25■□□□□ 0.19
LINC00654-202ENST00000589201 SH2D1BO14796 132 aa16.25■□□□□ 0.19
LINC00654-202ENST00000589201 NPFFO15130 113 aa16.25■□□□□ 0.19
LINC00654-202ENST00000589201 ATP6V1G2O95670 118 aa16.25■□□□□ 0.19
LINC00654-202ENST00000589201 ALDOBP05062 364 aa16.25■□□□□ 0.19
LINC00654-202ENST00000589201 RNASE1P07998 156 aaKnown RBP16.25■□□□□ 0.19
LINC00654-202ENST00000589201 EEF1B2P24534 225 aaKnown RBP16.25■□□□□ 0.19
LINC00654-202ENST00000589201 UBE2E1P51965 193 aa16.25■□□□□ 0.19
LINC00654-202ENST00000589201 PPP3R1P63098 170 aa16.25■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 56.1 ms