RNA–Protein interactions for RNA: ENST00000587338.1

SDF2-204, Transcript of stromal cell derived factor 2, humanhuman

TSL 3

Gene SDF2, Length 583 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF2-204ENST00000587338 PF4V1P10720 104 aa6.95□□□□□ -1.3
SDF2-204ENST00000587338 PAX6P26367 422 aa6.95□□□□□ -1.3
SDF2-204ENST00000587338 CX3CR1P49238 355 aa6.95□□□□□ -1.3
SDF2-204ENST00000587338 BMXP51813 675 aa6.95□□□□□ -1.3
SDF2-204ENST00000587338 TMBIM6P55061 237 aa6.95□□□□□ -1.3
SDF2-204ENST00000587338 KRTAP10-11P60412 298 aa6.95□□□□□ -1.3
SDF2-204ENST00000587338 VBP1P61758 197 aa6.95□□□□□ -1.3
SDF2-204ENST00000587338 NCS1P62166 190 aa6.95□□□□□ -1.3
SDF2-204ENST00000587338 GRB2P62993 217 aaKnown RBP6.95□□□□□ -1.3
SDF2-204ENST00000587338 BDH1Q02338 343 aa6.95□□□□□ -1.3
SDF2-204ENST00000587338 ROM1Q03395 351 aa6.95□□□□□ -1.3
SDF2-204ENST00000587338 COL10A1Q03692 680 aa6.95□□□□□ -1.3
SDF2-204ENST00000587338 CDK5R1Q15078 307 aa6.95□□□□□ -1.3
SDF2-204ENST00000587338 MICBQ29980 383 aa6.95□□□□□ -1.3
SDF2-204ENST00000587338 ZNF829Q3KNS6 432 aaPredicted RBP6.95□□□□□ -1.3
SDF2-204ENST00000587338 CCDC58Q4VC31 144 aa6.95□□□□□ -1.3
SDF2-204ENST00000587338 WDR38Q5JTN6 314 aa6.95□□□□□ -1.3
SDF2-204ENST00000587338 ZNF684Q5T5D7 378 aa6.95□□□□□ -1.3
SDF2-204ENST00000587338 TEX36Q5VZQ5 186 aa6.95□□□□□ -1.3
SDF2-204ENST00000587338 NCR3LG1Q68D85 454 aa6.95□□□□□ -1.3
SDF2-204ENST00000587338 COLCA1Q6ZS62 124 aa6.95□□□□□ -1.3
SDF2-204ENST00000587338 ZNF676Q8N7Q3 588 aa6.95□□□□□ -1.3
SDF2-204ENST00000587338 DTX3Q8N9I9 347 aa6.95□□□□□ -1.3
SDF2-204ENST00000587338 PLPP7Q8NBV4 271 aa6.95□□□□□ -1.3
SDF2-204ENST00000587338 OR5AK2Q8NH90 309 aa6.95□□□□□ -1.3
SDF2-204ENST00000587338 HAVCR2Q8TDQ0 301 aa6.95□□□□□ -1.3
SDF2-204ENST00000587338 RNF133Q8WVZ7 376 aa6.95□□□□□ -1.3
SDF2-204ENST00000587338 GHSRQ92847 366 aa6.95□□□□□ -1.3
SDF2-204ENST00000587338 RPL3LQ92901 407 aaKnown RBP6.95□□□□□ -1.3
SDF2-204ENST00000587338 TNFRSF14Q92956 283 aa6.95□□□□□ -1.3
SDF2-204ENST00000587338 SPTSSAQ969W0 71 aa6.95□□□□□ -1.3
SDF2-204ENST00000587338 C12orf43Q96C57 262 aaKnown RBP6.95□□□□□ -1.3
SDF2-204ENST00000587338 KCNJ15Q99712 375 aa6.95□□□□□ -1.3
SDF2-204ENST00000587338 ATF6BQ99941 703 aa6.95□□□□□ -1.3
SDF2-204ENST00000587338 PDCD1LG2Q9BQ51 273 aa6.95□□□□□ -1.3
SDF2-204ENST00000587338 DCTN5Q9BTE1 182 aa6.95□□□□□ -1.3
SDF2-204ENST00000587338 SLC22A4Q9H015 551 aa6.95□□□□□ -1.3
SDF2-204ENST00000587338 COMMD4Q9H0A8 199 aa6.95□□□□□ -1.3
SDF2-204ENST00000587338 ZNF702PQ9H963 129 aa6.95□□□□□ -1.3
SDF2-204ENST00000587338 SERTAD4Q9NUC0 356 aa6.95□□□□□ -1.3
SDF2-204ENST00000587338 NDUFB11Q9NX14 153 aa6.95□□□□□ -1.3
SDF2-204ENST00000587338 OR52A1Q9UKL2 312 aa6.95□□□□□ -1.3
SDF2-204ENST00000587338 STUB1Q9UNE7 303 aa6.95□□□□□ -1.3
SDF2-204ENST00000587338 SLC22A13Q9Y226 551 aa6.95□□□□□ -1.3
SDF2-204ENST00000587338 R4GMQ9 66 aa6.95□□□□□ -1.3
SDF2-204ENST00000587338 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP6.94□□□□□ -1.3
SDF2-204ENST00000587338 A0A1W2PQ09 198 aa6.94□□□□□ -1.3
SDF2-204ENST00000587338 GGT3PA6NGU5 568 aa6.94□□□□□ -1.3
SDF2-204ENST00000587338 CD300LBA8K4G0 201 aa6.94□□□□□ -1.3
SDF2-204ENST00000587338 H3BMQ9 156 aa6.94□□□□□ -1.3
SDF2-204ENST00000587338 TBX1O43435 398 aa6.94□□□□□ -1.3
SDF2-204ENST00000587338 NDUFB3O43676 98 aa6.94□□□□□ -1.3
SDF2-204ENST00000587338 ANGPTL7O43827 346 aa6.94□□□□□ -1.3
SDF2-204ENST00000587338 GPX5O75715 221 aa6.94□□□□□ -1.3
SDF2-204ENST00000587338 PTBP3O95758 552 aaKnown RBP6.94□□□□□ -1.3
SDF2-204ENST00000587338 SERPINA3P01011 423 aa6.94□□□□□ -1.3
SDF2-204ENST00000587338 PF4P02776 101 aa6.94□□□□□ -1.3
SDF2-204ENST00000587338 SLC2A1P11166 492 aa6.94□□□□□ -1.3
SDF2-204ENST00000587338 SELLP14151 372 aa6.94□□□□□ -1.3
SDF2-204ENST00000587338 HOXD3P31249 432 aaPredicted RBP6.94□□□□□ -1.3
SDF2-204ENST00000587338 TGFBR1P36897 503 aa6.94□□□□□ -1.3
SDF2-204ENST00000587338 OPRL1P41146 370 aa6.94□□□□□ -1.3
SDF2-204ENST00000587338 SERPINB10P48595 397 aa6.94□□□□□ -1.3
SDF2-204ENST00000587338 TGM4P49221 684 aa6.94□□□□□ -1.3
SDF2-204ENST00000587338 ZNF121P58317 390 aaPredicted RBP6.94□□□□□ -1.3
SDF2-204ENST00000587338 NANOS3P60323 173 aaKnown RBP6.94□□□□□ -1.3
SDF2-204ENST00000587338 MFGE8Q08431 387 aaPredicted RBP6.94□□□□□ -1.3
SDF2-204ENST00000587338 GPR50Q13585 617 aa6.94□□□□□ -1.3
SDF2-204ENST00000587338 TRAM1Q15629 374 aa6.94□□□□□ -1.3
SDF2-204ENST00000587338 RSPO1Q2MKA7 263 aaPredicted RBP6.94□□□□□ -1.3
SDF2-204ENST00000587338 CNPY1Q3B7I2 92 aa6.94□□□□□ -1.3
SDF2-204ENST00000587338 GFOD2Q3B7J2 385 aa6.94□□□□□ -1.3
SDF2-204ENST00000587338 ARSJQ5FYB0 599 aaPredicted RBP6.94□□□□□ -1.3
SDF2-204ENST00000587338 BCL2L15Q5TBC7 163 aa6.94□□□□□ -1.3
SDF2-204ENST00000587338 DMKNQ6E0U4 476 aaPredicted RBP6.94□□□□□ -1.3
SDF2-204ENST00000587338 CRIP3Q6Q6R5 217 aa6.94□□□□□ -1.3
SDF2-204ENST00000587338 DEGS2Q6QHC5 323 aa6.94□□□□□ -1.3
SDF2-204ENST00000587338 SLC16A12Q6ZSM3 486 aa6.94□□□□□ -1.3
SDF2-204ENST00000587338 FAM57BQ71RH2 274 aa6.94□□□□□ -1.3
SDF2-204ENST00000587338 SLC36A1Q7Z2H8 476 aa6.94□□□□□ -1.3
SDF2-204ENST00000587338 CEACAM19Q7Z692 300 aa6.94□□□□□ -1.3
SDF2-204ENST00000587338 NAA40Q86UY6 237 aa6.94□□□□□ -1.3
SDF2-204ENST00000587338 COMMD2Q86X83 199 aa6.94□□□□□ -1.3
SDF2-204ENST00000587338 WFDC9Q8NEX5 89 aa6.94□□□□□ -1.3
SDF2-204ENST00000587338 OR13C5Q8NGS8 318 aa6.94□□□□□ -1.3
SDF2-204ENST00000587338 OR2G2Q8NGZ5 317 aa6.94□□□□□ -1.3
SDF2-204ENST00000587338 LRRC29Q8WV35 223 aa6.94□□□□□ -1.3
SDF2-204ENST00000587338 TSEN15Q8WW01 171 aaKnown RBP6.94□□□□□ -1.3
SDF2-204ENST00000587338 SMIM19Q96E16 107 aa6.94□□□□□ -1.3
SDF2-204ENST00000587338 PGAM5Q96HS1 289 aa6.94□□□□□ -1.3
SDF2-204ENST00000587338 DCUN1D5Q9BTE7 237 aa6.94□□□□□ -1.3
SDF2-204ENST00000587338 CENPOQ9BU64 300 aa6.94□□□□□ -1.3
SDF2-204ENST00000587338 RBM38Q9H0Z9 239 aaKnown RBP6.94□□□□□ -1.3
SDF2-204ENST00000587338 RNF167Q9H6Y7 350 aa6.94□□□□□ -1.3
SDF2-204ENST00000587338 METTL8Q9H825 291 aaKnown RBP6.94□□□□□ -1.3
SDF2-204ENST00000587338 NIPAL2Q9H841 368 aa6.94□□□□□ -1.3
SDF2-204ENST00000587338 PNRC2Q9NPJ4 139 aaKnown RBP6.94□□□□□ -1.3
SDF2-204ENST00000587338 FRRS1LQ9P0K9 344 aa6.94□□□□□ -1.3
SDF2-204ENST00000587338 GSTK1Q9Y2Q3 226 aa6.94□□□□□ -1.3
SDF2-204ENST00000587338 DYNC2H1Q8NCM8 4307 aaKnown RBP6.94□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms