RNA–Protein interactions for RNA: ENST00000585799.5

SMARCA4-208, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

TSL 2

Gene SMARCA4, Length 3,842 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-208ENST00000585799 RFPL4BQ6ZWI9 263 aa10.78□□□□□ -0.68
SMARCA4-208ENST00000585799 OCSTAMPQ9BR26 566 aa10.78□□□□□ -0.68
SMARCA4-208ENST00000585799 MAGT1Q9H0U3 335 aa10.78□□□□□ -0.68
SMARCA4-208ENST00000585799 HRH4Q9H3N8 390 aa10.78□□□□□ -0.68
SMARCA4-208ENST00000585799 ZNF175Q9Y473 711 aa10.78□□□□□ -0.68
SMARCA4-208ENST00000585799 ZGRF1Q86YA3 2104 aa10.77□□□□□ -0.68
SMARCA4-208ENST00000585799 IGF2RP11717 2491 aa10.77□□□□□ -0.68
SMARCA4-208ENST00000585799 M0R1B8 84 aa10.77□□□□□ -0.68
SMARCA4-208ENST00000585799 CDIPTO14735 213 aa10.77□□□□□ -0.68
SMARCA4-208ENST00000585799 MPC2O95563 127 aa10.77□□□□□ -0.68
SMARCA4-208ENST00000585799 IL2RAP01589 272 aa10.77□□□□□ -0.68
SMARCA4-208ENST00000585799 BMP5P22003 454 aa10.77□□□□□ -0.68
SMARCA4-208ENST00000585799 FPR2P25090 351 aa10.77□□□□□ -0.68
SMARCA4-208ENST00000585799 ASCL1P50553 236 aa10.77□□□□□ -0.68
SMARCA4-208ENST00000585799 GNG3P63215 75 aa10.77□□□□□ -0.68
SMARCA4-208ENST00000585799 RAB32Q13637 225 aa10.77□□□□□ -0.68
SMARCA4-208ENST00000585799 HIST3H3Q16695 136 aa10.77□□□□□ -0.68
SMARCA4-208ENST00000585799 ABLIM2Q6H8Q1 611 aa10.77□□□□□ -0.68
SMARCA4-208ENST00000585799 ZNF573Q86YE8 665 aa10.77□□□□□ -0.68
SMARCA4-208ENST00000585799 IL36RNQ9UBH0 155 aa10.77□□□□□ -0.68
SMARCA4-208ENST00000585799 RNF150Q9ULK6 438 aa10.77□□□□□ -0.68
SMARCA4-208ENST00000585799 SPEF1Q9Y4P9 236 aa10.77□□□□□ -0.68
SMARCA4-208ENST00000585799 FRYLO94915 3013 aa10.77□□□□□ -0.69
SMARCA4-208ENST00000585799 PLSCR5A0PG75 271 aa10.77□□□□□ -0.69
SMARCA4-208ENST00000585799 TTLL8A6PVC2 850 aa10.77□□□□□ -0.69
SMARCA4-208ENST00000585799 ZNF891A8MT65 544 aaPredicted RBP10.77□□□□□ -0.69
SMARCA4-208ENST00000585799 K7EPK0 472 aa10.77□□□□□ -0.69
SMARCA4-208ENST00000585799 LRP3O75074 770 aa10.77□□□□□ -0.69
SMARCA4-208ENST00000585799 WDR1O75083 606 aa10.77□□□□□ -0.69
SMARCA4-208ENST00000585799 IL2RGP31785 369 aa10.77□□□□□ -0.69
SMARCA4-208ENST00000585799 ERVS71-1P61550 626 aa10.77□□□□□ -0.69
SMARCA4-208ENST00000585799 PPP1CBP62140 327 aa10.77□□□□□ -0.69
SMARCA4-208ENST00000585799 FAM71E2Q8N5Q1 922 aa10.77□□□□□ -0.69
SMARCA4-208ENST00000585799 RTL8AQ9BWD3 113 aa10.77□□□□□ -0.69
SMARCA4-208ENST00000585799 MSL2Q9HCI7 577 aa10.77□□□□□ -0.69
SMARCA4-208ENST00000585799 KCNIP1Q9NZI2 227 aa10.77□□□□□ -0.69
SMARCA4-208ENST00000585799 PIPOXQ9P0Z9 390 aa10.77□□□□□ -0.69
SMARCA4-208ENST00000585799 SELENOVP59797 346 aa10.77□□□□□ -0.69
SMARCA4-208ENST00000585799 C5orf24Q7Z6I8 188 aa10.77□□□□□ -0.69
SMARCA4-208ENST00000585799 ADAT1Q9BUB4 502 aaKnown RBP10.77□□□□□ -0.69
SMARCA4-208ENST00000585799 MFNGO00587 321 aa10.76□□□□□ -0.69
SMARCA4-208ENST00000585799 DUS4LO95620 317 aaKnown RBP10.76□□□□□ -0.69
SMARCA4-208ENST00000585799 PDGFAP04085 211 aa10.76□□□□□ -0.69
SMARCA4-208ENST00000585799 CELA3BP08861 270 aa10.76□□□□□ -0.69
SMARCA4-208ENST00000585799 PVALBP20472 110 aaPredicted RBP10.76□□□□□ -0.69
SMARCA4-208ENST00000585799 TNFSF10P50591 281 aa10.76□□□□□ -0.69
SMARCA4-208ENST00000585799 CLINT1Q14677 625 aa10.76□□□□□ -0.69
SMARCA4-208ENST00000585799 PLA2G2CQ5R387 149 aa10.76□□□□□ -0.69
SMARCA4-208ENST00000585799 TMEM268Q5VZI3 342 aa10.76□□□□□ -0.69
SMARCA4-208ENST00000585799 CCDC36Q8IYA8 594 aa10.76□□□□□ -0.69
SMARCA4-208ENST00000585799 CCDC54Q8NEL0 328 aa10.76□□□□□ -0.69
SMARCA4-208ENST00000585799 OR6K3Q8NGY3 331 aa10.76□□□□□ -0.69
SMARCA4-208ENST00000585799 SLC25A40Q8TBP6 338 aa10.76□□□□□ -0.69
SMARCA4-208ENST00000585799 MUC3AQ02505 3323 aa10.76□□□□□ -0.69
SMARCA4-208ENST00000585799 ZNF705EA8MWA4 302 aaPredicted RBP10.76□□□□□ -0.69
SMARCA4-208ENST00000585799 SFT2D2O95562 160 aa10.76□□□□□ -0.69
SMARCA4-208ENST00000585799 AADACL3Q5VUY0 350 aa10.76□□□□□ -0.69
SMARCA4-208ENST00000585799 ACOT7LQ6ZUV0 252 aa10.76□□□□□ -0.69
SMARCA4-208ENST00000585799 HOGA1Q86XE5 327 aa10.76□□□□□ -0.69
SMARCA4-208ENST00000585799 OR11L1Q8NGX0 322 aa10.76□□□□□ -0.69
SMARCA4-208ENST00000585799 ST8SIA2Q92186 375 aa10.76□□□□□ -0.69
SMARCA4-208ENST00000585799 FAM234AQ9H0X4 552 aa10.76□□□□□ -0.69
SMARCA4-208ENST00000585799 SPRR3Q9UBC9 169 aa10.76□□□□□ -0.69
SMARCA4-208ENST00000585799 PPP1R3CQ9UQK1 317 aa10.76□□□□□ -0.69
SMARCA4-208ENST00000585799 IGKV1D-8A0A087WSZ0 117 aa10.76□□□□□ -0.69
SMARCA4-208ENST00000585799 H3BUI4 141 aa10.76□□□□□ -0.69
SMARCA4-208ENST00000585799 OR5AC1P0C628 307 aa10.76□□□□□ -0.69
SMARCA4-208ENST00000585799 RSPO1Q2MKA7 263 aaPredicted RBP10.76□□□□□ -0.69
SMARCA4-208ENST00000585799 IGSF11Q5DX21 431 aa10.76□□□□□ -0.69
SMARCA4-208ENST00000585799 LPCAT3Q6P1A2 487 aa10.76□□□□□ -0.69
SMARCA4-208ENST00000585799 DPPA2Q7Z7J5 298 aa10.76□□□□□ -0.69
SMARCA4-208ENST00000585799 TMEM217Q8N7C4 229 aa10.76□□□□□ -0.69
SMARCA4-208ENST00000585799 HSD17B11Q8NBQ5 300 aa10.76□□□□□ -0.69
SMARCA4-208ENST00000585799 RFESDQ8TAC1 157 aa10.76□□□□□ -0.69
SMARCA4-208ENST00000585799 GTF3C1Q12789 2109 aa10.76□□□□□ -0.69
SMARCA4-208ENST00000585799 PLCE1Q9P212 2302 aa10.76□□□□□ -0.69
SMARCA4-208ENST00000585799 LOC390937A0A1W2PQ73 354 aa10.75□□□□□ -0.69
SMARCA4-208ENST00000585799 B8ZZF3 427 aa10.75□□□□□ -0.69
SMARCA4-208ENST00000585799 TUSC2O75896 110 aa10.75□□□□□ -0.69
SMARCA4-208ENST00000585799 TPPPO94811 219 aa10.75□□□□□ -0.69
SMARCA4-208ENST00000585799 TPT1P13693 172 aaKnown RBP10.75□□□□□ -0.69
SMARCA4-208ENST00000585799 ZNF250P15622 560 aa10.75□□□□□ -0.69
SMARCA4-208ENST00000585799 FAM58AQ8N1B3 248 aa10.75□□□□□ -0.69
SMARCA4-208ENST00000585799 ZNF808Q8N4W9 903 aaPredicted RBP10.75□□□□□ -0.69
SMARCA4-208ENST00000585799 SCARB1Q8WTV0 552 aa10.75□□□□□ -0.69
SMARCA4-208ENST00000585799 RRNAD1Q96FB5 475 aaKnown RBP10.75□□□□□ -0.69
SMARCA4-208ENST00000585799 ARPC5LQ9BPX5 153 aa10.75□□□□□ -0.69
SMARCA4-208ENST00000585799 OPN3Q9H1Y3 402 aaPredicted RBP10.75□□□□□ -0.69
SMARCA4-208ENST00000585799 FANCFQ9NPI8 374 aa10.75□□□□□ -0.69
SMARCA4-208ENST00000585799 GLS2Q9UI32 602 aa10.75□□□□□ -0.69
SMARCA4-208ENST00000585799 ZNF391Q9UJN7 358 aa10.75□□□□□ -0.69
SMARCA4-208ENST00000585799 V9GYS6 101 aa10.75□□□□□ -0.69
SMARCA4-208ENST00000585799 LDLRAD4O15165 306 aa10.75□□□□□ -0.69
SMARCA4-208ENST00000585799 IGHV3-13P01766 116 aa10.75□□□□□ -0.69
SMARCA4-208ENST00000585799 IGHV3-7P01780 117 aa10.75□□□□□ -0.69
SMARCA4-208ENST00000585799 ATF4P18848 351 aaPredicted RBP10.75□□□□□ -0.69
SMARCA4-208ENST00000585799 ZBTB25P24278 435 aa10.75□□□□□ -0.69
SMARCA4-208ENST00000585799 RBM39Q14498 530 aaKnown RBP10.75□□□□□ -0.69
SMARCA4-208ENST00000585799 OR1S1Q8NH92 325 aa10.75□□□□□ -0.69
SMARCA4-208ENST00000585799 CXorf58Q96LI9 332 aa10.75□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms