RNA–Protein interactions for RNA: ENST00000584897.5

SMCHD1-211, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

TSL 2

Gene SMCHD1, Length 4,143 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-211ENST00000584897 PSMA1P25786 263 aaKnown RBP1.57□□□□□ -2.16
SMCHD1-211ENST00000584897 GSSP48637 474 aa1.57□□□□□ -2.16
SMCHD1-211ENST00000584897 PPOXP50336 477 aa1.57□□□□□ -2.16
SMCHD1-211ENST00000584897 TDGF1P3P51864 188 aa1.57□□□□□ -2.16
SMCHD1-211ENST00000584897 MAGOHP61326 146 aaKnown RBP1.57□□□□□ -2.16
SMCHD1-211ENST00000584897 RPL38P63173 70 aaKnown RBP1.57□□□□□ -2.16
SMCHD1-211ENST00000584897 ACTC1P68032 377 aa1.57□□□□□ -2.16
SMCHD1-211ENST00000584897 ACTA1P68133 377 aa1.57□□□□□ -2.16
SMCHD1-211ENST00000584897 DYNC1I2Q13409 638 aaKnown RBP1.57□□□□□ -2.16
SMCHD1-211ENST00000584897 OR5I1Q13606 314 aa1.57□□□□□ -2.16
SMCHD1-211ENST00000584897 GPR176Q14439 515 aa1.57□□□□□ -2.16
SMCHD1-211ENST00000584897 OXA1LQ15070 435 aa1.57□□□□□ -2.16
SMCHD1-211ENST00000584897 USF2Q15853 346 aaPredicted RBP1.57□□□□□ -2.16
SMCHD1-211ENST00000584897 SLC36A2Q495M3 483 aa1.57□□□□□ -2.16
SMCHD1-211ENST00000584897 LINC01620Q4KN68 170 aa1.57□□□□□ -2.16
SMCHD1-211ENST00000584897 TEX30Q5JUR7 227 aa1.57□□□□□ -2.16
SMCHD1-211ENST00000584897 LPCAT4Q643R3 524 aa1.57□□□□□ -2.16
SMCHD1-211ENST00000584897 PYHIN1Q6K0P9 492 aa1.57□□□□□ -2.16
SMCHD1-211ENST00000584897 ATRAIDQ6UW56 229 aa1.57□□□□□ -2.16
SMCHD1-211ENST00000584897 CMC1Q7Z7K0 106 aa1.57□□□□□ -2.16
SMCHD1-211ENST00000584897 C10orf107Q8IVU9 208 aa1.57□□□□□ -2.16
SMCHD1-211ENST00000584897 GID4Q8IVV7 300 aa1.57□□□□□ -2.16
SMCHD1-211ENST00000584897 ENTHD1Q8IYW4 607 aa1.57□□□□□ -2.16
SMCHD1-211ENST00000584897 C15orf54Q8N8G6 183 aa1.57□□□□□ -2.16
SMCHD1-211ENST00000584897 APCDD1LQ8NCL9 501 aa1.57□□□□□ -2.16
SMCHD1-211ENST00000584897 OR52L1Q8NGH7 329 aa1.57□□□□□ -2.16
SMCHD1-211ENST00000584897 VN1R17PQ8TDU5 208 aa1.57□□□□□ -2.16
SMCHD1-211ENST00000584897 ZFP90Q8TF47 636 aa1.57□□□□□ -2.16
SMCHD1-211ENST00000584897 GATAD1Q8WUU5 269 aa1.57□□□□□ -2.16
SMCHD1-211ENST00000584897 COQ2Q96H96 371 aa1.57□□□□□ -2.16
SMCHD1-211ENST00000584897 ATP5SQ99766 215 aa1.57□□□□□ -2.16
SMCHD1-211ENST00000584897 ECSITQ9BQ95 431 aa1.57□□□□□ -2.16
SMCHD1-211ENST00000584897 BEX2Q9BXY8 128 aa1.57□□□□□ -2.16
SMCHD1-211ENST00000584897 ZFP57Q9NU63 452 aa1.57□□□□□ -2.16
SMCHD1-211ENST00000584897 MCUBQ9NWR8 336 aa1.57□□□□□ -2.16
SMCHD1-211ENST00000584897 MYEF2Q9P2K5 600 aaKnown RBP1.57□□□□□ -2.16
SMCHD1-211ENST00000584897 RNF11Q9Y3C5 154 aa1.57□□□□□ -2.16
SMCHD1-211ENST00000584897 ZNF337Q9Y3M9 751 aa1.57□□□□□ -2.16
SMCHD1-211ENST00000584897 DNAJC15Q9Y5T4 150 aa1.57□□□□□ -2.16
SMCHD1-211ENST00000584897 MED13LQ71F56 2210 aa1.57□□□□□ -2.16
SMCHD1-211ENST00000584897 NUMA1Q14980 2115 aa1.57□□□□□ -2.16
SMCHD1-211ENST00000584897 CACNA1EQ15878 2313 aa1.57□□□□□ -2.16
SMCHD1-211ENST00000584897 B4DXG7 233 aa1.57□□□□□ -2.16
SMCHD1-211ENST00000584897 BOLA2-SMG1P6H3BVE0 249 aa1.57□□□□□ -2.16
SMCHD1-211ENST00000584897 SULT2B1O00204 365 aa1.57□□□□□ -2.16
SMCHD1-211ENST00000584897 SIRPB1O00241 398 aa1.57□□□□□ -2.16
SMCHD1-211ENST00000584897 C6orf47O95873 294 aa1.57□□□□□ -2.16
SMCHD1-211ENST00000584897 IFNW1P05000 195 aa1.57□□□□□ -2.16
SMCHD1-211ENST00000584897 FRMD6-AS1P0C7T7 363 aa1.57□□□□□ -2.16
SMCHD1-211ENST00000584897 RBMY1CP0DJD4 496 aa1.57□□□□□ -2.16
SMCHD1-211ENST00000584897 CRYGSP22914 178 aa1.57□□□□□ -2.16
SMCHD1-211ENST00000584897 NAA10P41227 235 aaPredicted RBP1.57□□□□□ -2.16
SMCHD1-211ENST00000584897 ARHGDIBP52566 201 aa1.57□□□□□ -2.16
SMCHD1-211ENST00000584897 EFNA3P52797 238 aa1.57□□□□□ -2.16
SMCHD1-211ENST00000584897 SLC25A1P53007 311 aa1.57□□□□□ -2.16
SMCHD1-211ENST00000584897 ESRRGP62508 458 aa1.57□□□□□ -2.16
SMCHD1-211ENST00000584897 RPL32P62910 135 aaKnown RBP1.57□□□□□ -2.16
SMCHD1-211ENST00000584897 CDK6Q00534 326 aa1.57□□□□□ -2.16
SMCHD1-211ENST00000584897 HMGCS1Q01581 520 aa1.57□□□□□ -2.16
SMCHD1-211ENST00000584897 GNMTQ14749 295 aa1.57□□□□□ -2.16
SMCHD1-211ENST00000584897 CD226Q15762 336 aa1.57□□□□□ -2.16
SMCHD1-211ENST00000584897 ZNF181Q2M3W8 571 aa1.57□□□□□ -2.16
SMCHD1-211ENST00000584897 HIKESHIQ53FT3 197 aa1.57□□□□□ -2.16
SMCHD1-211ENST00000584897 THEM4Q5T1C6 240 aa1.57□□□□□ -2.16
SMCHD1-211ENST00000584897 CNIH2Q6PI25 160 aa1.57□□□□□ -2.16
SMCHD1-211ENST00000584897 PAMR1Q6UXH9 720 aa1.57□□□□□ -2.16
SMCHD1-211ENST00000584897 FRRS1Q6ZNA5 592 aa1.57□□□□□ -2.16
SMCHD1-211ENST00000584897 DHDDSQ86SQ9 333 aa1.57□□□□□ -2.16
SMCHD1-211ENST00000584897 FAM58AQ8N1B3 248 aa1.57□□□□□ -2.16
SMCHD1-211ENST00000584897 FAM86B1Q8N7N1 296 aa1.57□□□□□ -2.16
SMCHD1-211ENST00000584897 OR52R1Q8NGF1 315 aa1.57□□□□□ -2.16
SMCHD1-211ENST00000584897 OR13F1Q8NGS4 319 aa1.57□□□□□ -2.16
SMCHD1-211ENST00000584897 OR6X1Q8NH79 312 aa1.57□□□□□ -2.16
SMCHD1-211ENST00000584897 C15orf40Q8WUR7 153 aa1.57□□□□□ -2.16
SMCHD1-211ENST00000584897 TMEM158Q8WZ71 300 aa1.57□□□□□ -2.16
SMCHD1-211ENST00000584897 EEF1AKMT3Q96AZ1 226 aa1.57□□□□□ -2.16
SMCHD1-211ENST00000584897 APH1AQ96BI3 265 aa1.57□□□□□ -2.16
SMCHD1-211ENST00000584897 PRAC1Q96KF2 57 aa1.57□□□□□ -2.16
SMCHD1-211ENST00000584897 RBP7Q96R05 134 aa1.57□□□□□ -2.16
SMCHD1-211ENST00000584897 CGREF1Q99674 301 aa1.57□□□□□ -2.16
SMCHD1-211ENST00000584897 TMEM59Q9BXS4 323 aa1.57□□□□□ -2.16
SMCHD1-211ENST00000584897 GABARAPL1Q9H0R8 117 aa1.57□□□□□ -2.16
SMCHD1-211ENST00000584897 FAM60AQ9NP50 221 aa1.57□□□□□ -2.16
SMCHD1-211ENST00000584897 MTCH1Q9NZJ7 389 aa1.57□□□□□ -2.16
SMCHD1-211ENST00000584897 MED31Q9Y3C7 131 aa1.57□□□□□ -2.16
SMCHD1-211ENST00000584897 LRRC42Q9Y546 428 aa1.57□□□□□ -2.16
SMCHD1-211ENST00000584897 DNAH1Q9P2D7 4330 aa1.57□□□□□ -2.16
SMCHD1-211ENST00000584897 IGHV2-70DA0A0C4DH43 119 aa1.56□□□□□ -2.16
SMCHD1-211ENST00000584897 A0A1W2PPV4 95 aa1.56□□□□□ -2.16
SMCHD1-211ENST00000584897 SLC22A20A6NK97 555 aa1.56□□□□□ -2.16
SMCHD1-211ENST00000584897 FAM166BA8MTA8 275 aa1.56□□□□□ -2.16
SMCHD1-211ENST00000584897 SERPINE3A8MV23 424 aa1.56□□□□□ -2.16
SMCHD1-211ENST00000584897 A8MX80 341 aa1.56□□□□□ -2.16
SMCHD1-211ENST00000584897 HSBP1L1C9JCN9 74 aa1.56□□□□□ -2.16
SMCHD1-211ENST00000584897 GLAP06280 429 aa1.56□□□□□ -2.16
SMCHD1-211ENST00000584897 GDF1P27539 372 aa1.56□□□□□ -2.16
SMCHD1-211ENST00000584897 CALCRP30988 508 aa1.56□□□□□ -2.16
SMCHD1-211ENST00000584897 PSMD7P51665 324 aa1.56□□□□□ -2.16
SMCHD1-211ENST00000584897 TAS2R43P59537 309 aa1.56□□□□□ -2.16
SMCHD1-211ENST00000584897 PLP1P60201 277 aa1.56□□□□□ -2.16
Retrieved 100 of 20,778 RNA–protein pairs in 54.8 ms