RNA–Protein interactions for RNA: ENST00000584550.1

GGA3-219, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, humanhuman

TSL 5

Gene GGA3, Length 598 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA3-219ENST00000584550 DUX4Q9UBX2 424 aa8.3□□□□□ -1.08
GGA3-219ENST00000584550 PSORS1C1Q9UIG5 152 aa8.3□□□□□ -1.08
GGA3-219ENST00000584550 RPUSD1Q9UJJ7 312 aaKnown RBP8.3□□□□□ -1.08
GGA3-219ENST00000584550 HHLA2Q9UM44 414 aa8.3□□□□□ -1.08
GGA3-219ENST00000584550 DIMT1Q9UNQ2 313 aaKnown RBP8.3□□□□□ -1.08
GGA3-219ENST00000584550 SLC7A11Q9UPY5 501 aa8.3□□□□□ -1.08
GGA3-219ENST00000584550 KPTNQ9Y664 436 aa8.3□□□□□ -1.08
GGA3-219ENST00000584550 TENM2Q9NT68 2774 aa8.29□□□□□ -1.08
GGA3-219ENST00000584550 PQLC2LA1A4F0 135 aa8.29□□□□□ -1.08
GGA3-219ENST00000584550 DHRS7CA6NNS2 312 aa8.29□□□□□ -1.08
GGA3-219ENST00000584550 ADARB2-AS1A8MUL3 147 aa8.29□□□□□ -1.08
GGA3-219ENST00000584550 GATBO75879 557 aaKnown RBP8.29□□□□□ -1.08
GGA3-219ENST00000584550 ZFPL1O95159 310 aa8.29□□□□□ -1.08
GGA3-219ENST00000584550 ECDO95905 644 aaPredicted RBP8.29□□□□□ -1.08
GGA3-219ENST00000584550 LHBP01229 141 aa8.29□□□□□ -1.08
GGA3-219ENST00000584550 TFF1P04155 84 aa8.29□□□□□ -1.08
GGA3-219ENST00000584550 CCDC159P0C7I6 412 aa8.29□□□□□ -1.08
GGA3-219ENST00000584550 OCM2P0CE71 109 aa8.29□□□□□ -1.08
GGA3-219ENST00000584550 OCMP0CE72 109 aaPredicted RBP8.29□□□□□ -1.08
GGA3-219ENST00000584550 C21orf33P30042 268 aaPredicted RBP8.29□□□□□ -1.08
GGA3-219ENST00000584550 HAAOP46952 286 aa8.29□□□□□ -1.08
GGA3-219ENST00000584550 GUCA2AQ02747 115 aa8.29□□□□□ -1.08
GGA3-219ENST00000584550 RIPK1Q13546 671 aa8.29□□□□□ -1.08
GGA3-219ENST00000584550 UBE2V2Q15819 145 aa8.29□□□□□ -1.08
GGA3-219ENST00000584550 MICBQ29980 383 aa8.29□□□□□ -1.08
GGA3-219ENST00000584550 C6orf141Q5SZD1 244 aa8.29□□□□□ -1.08
GGA3-219ENST00000584550 TMEM42Q69YG0 159 aa8.29□□□□□ -1.08
GGA3-219ENST00000584550 XAF1Q6GPH4 301 aa8.29□□□□□ -1.08
GGA3-219ENST00000584550 Q6ZSR3 168 aa8.29□□□□□ -1.08
GGA3-219ENST00000584550 KRT74Q7RTS7 529 aa8.29□□□□□ -1.08
GGA3-219ENST00000584550 ANGPTL5Q86XS5 388 aa8.29□□□□□ -1.08
GGA3-219ENST00000584550 NDUFA11Q86Y39 141 aa8.29□□□□□ -1.08
GGA3-219ENST00000584550 FAM90A1Q86YD7 464 aa8.29□□□□□ -1.08
GGA3-219ENST00000584550 ZFP41Q8N8Y5 198 aa8.29□□□□□ -1.08
GGA3-219ENST00000584550 CCDC54Q8NEL0 328 aa8.29□□□□□ -1.08
GGA3-219ENST00000584550 ZNF671Q8TAW3 534 aa8.29□□□□□ -1.08
GGA3-219ENST00000584550 FBLIM1Q8WUP2 373 aa8.29□□□□□ -1.08
GGA3-219ENST00000584550 TSEN15Q8WW01 171 aaKnown RBP8.29□□□□□ -1.08
GGA3-219ENST00000584550 AQP3Q92482 292 aa8.29□□□□□ -1.08
GGA3-219ENST00000584550 ADAT3Q96EY9 351 aaPredicted RBP8.29□□□□□ -1.08
GGA3-219ENST00000584550 CNBD2Q96M20 576 aa8.29□□□□□ -1.08
GGA3-219ENST00000584550 ZNF488Q96MN9 340 aa8.29□□□□□ -1.08
GGA3-219ENST00000584550 OR5M11Q96RB7 305 aa8.29□□□□□ -1.08
GGA3-219ENST00000584550 CCL13Q99616 98 aa8.29□□□□□ -1.08
GGA3-219ENST00000584550 B9D2Q9BPU9 175 aa8.29□□□□□ -1.08
GGA3-219ENST00000584550 PDCD1LG2Q9BQ51 273 aa8.29□□□□□ -1.08
GGA3-219ENST00000584550 JAM3Q9BX67 310 aa8.29□□□□□ -1.08
GGA3-219ENST00000584550 TLNRD1Q9H1K6 362 aa8.29□□□□□ -1.08
GGA3-219ENST00000584550 CNOT2Q9NZN8 540 aaKnown RBP8.29□□□□□ -1.08
GGA3-219ENST00000584550 RRP15Q9Y3B9 282 aaKnown RBP8.29□□□□□ -1.08
GGA3-219ENST00000584550 MAB21L2Q9Y586 359 aa8.29□□□□□ -1.08
GGA3-219ENST00000584550 DYNC2H1Q8NCM8 4307 aaKnown RBP8.28□□□□□ -1.08
GGA3-219ENST00000584550 PNMA8CA0A1B0GUJ8 204 aa8.28□□□□□ -1.08
GGA3-219ENST00000584550 TMEM212A6NML5 194 aa8.28□□□□□ -1.08
GGA3-219ENST00000584550 J3QT63 122 aa8.28□□□□□ -1.08
GGA3-219ENST00000584550 SYNGR1O43759 233 aa8.28□□□□□ -1.08
GGA3-219ENST00000584550 ISG15P05161 165 aa8.28□□□□□ -1.08
GGA3-219ENST00000584550 PIPP12273 146 aaPredicted RBP8.28□□□□□ -1.08
GGA3-219ENST00000584550 GLRA1P23415 457 aa8.28□□□□□ -1.08
GGA3-219ENST00000584550 HOXD3P31249 432 aaPredicted RBP8.28□□□□□ -1.08
GGA3-219ENST00000584550 GABRA2P47869 451 aa8.28□□□□□ -1.08
GGA3-219ENST00000584550 SOX2P48431 317 aa8.28□□□□□ -1.08
GGA3-219ENST00000584550 HSPA13P48723 471 aa8.28□□□□□ -1.08
GGA3-219ENST00000584550 TGM4P49221 684 aa8.28□□□□□ -1.08
GGA3-219ENST00000584550 COL10A1Q03692 680 aa8.28□□□□□ -1.08
GGA3-219ENST00000584550 MRPL28Q13084 256 aaKnown RBP8.28□□□□□ -1.08
GGA3-219ENST00000584550 FAM76BQ5HYJ3 339 aa8.28□□□□□ -1.08
GGA3-219ENST00000584550 TEX36Q5VZQ5 186 aa8.28□□□□□ -1.08
GGA3-219ENST00000584550 ZNF573Q86YE8 665 aa8.28□□□□□ -1.08
GGA3-219ENST00000584550 CMTM4Q8IZR5 234 aa8.28□□□□□ -1.08
GGA3-219ENST00000584550 Q8N7P7 452 aa8.28□□□□□ -1.08
GGA3-219ENST00000584550 OR10Z1Q8NGY1 313 aa8.28□□□□□ -1.08
GGA3-219ENST00000584550 BORCS8Q96FH0 119 aa8.28□□□□□ -1.08
GGA3-219ENST00000584550 CHST5Q9GZS9 411 aa8.28□□□□□ -1.08
GGA3-219ENST00000584550 TRIM36Q9NQ86 728 aa8.28□□□□□ -1.08
GGA3-219ENST00000584550 PLCXD1Q9NUJ7 323 aa8.28□□□□□ -1.08
GGA3-219ENST00000584550 BABAM2Q9NXR7 383 aa8.28□□□□□ -1.08
GGA3-219ENST00000584550 SCN3BQ9NY72 215 aa8.28□□□□□ -1.08
GGA3-219ENST00000584550 DHDHQ9UQ10 334 aa8.28□□□□□ -1.08
GGA3-219ENST00000584550 SIRT4Q9Y6E7 314 aaPredicted RBP8.28□□□□□ -1.08
GGA3-219ENST00000584550 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP8.27□□□□□ -1.09
GGA3-219ENST00000584550 SLC1A7O00341 560 aa8.27□□□□□ -1.09
GGA3-219ENST00000584550 MYL12BO14950 172 aa8.27□□□□□ -1.09
GGA3-219ENST00000584550 NDUFA2O43678 99 aa8.27□□□□□ -1.09
GGA3-219ENST00000584550 CHST1O43916 411 aa8.27□□□□□ -1.09
GGA3-219ENST00000584550 LALBAP00709 142 aa8.27□□□□□ -1.09
GGA3-219ENST00000584550 MUC1P15941 1255 aaPredicted RBP8.27□□□□□ -1.09
GGA3-219ENST00000584550 ATF1P18846 271 aa8.27□□□□□ -1.09
GGA3-219ENST00000584550 MYF6P23409 242 aa8.27□□□□□ -1.09
GGA3-219ENST00000584550 VHLP40337 213 aa8.27□□□□□ -1.09
GGA3-219ENST00000584550 FUT6P51993 359 aa8.27□□□□□ -1.09
GGA3-219ENST00000584550 IKZF1Q13422 519 aa8.27□□□□□ -1.09
GGA3-219ENST00000584550 CDK5R1Q15078 307 aa8.27□□□□□ -1.09
GGA3-219ENST00000584550 CNN3Q15417 329 aaKnown RBP8.27□□□□□ -1.09
GGA3-219ENST00000584550 RPL22L1Q6P5R6 122 aaKnown RBP8.27□□□□□ -1.09
GGA3-219ENST00000584550 METAP1DQ6UB28 335 aaPredicted RBP8.27□□□□□ -1.09
GGA3-219ENST00000584550 CALHM1Q8IU99 346 aa8.27□□□□□ -1.09
GGA3-219ENST00000584550 EGFL6Q8IUX8 553 aa8.27□□□□□ -1.09
GGA3-219ENST00000584550 FAM216BQ8N7L0 139 aa8.27□□□□□ -1.09
GGA3-219ENST00000584550 LY6G5BQ8NDX9 201 aa8.27□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms