RNA–Protein interactions for RNA: ENST00000583976.1

SKA2-209, Transcript of spindle and kinetochore associated complex subunit 2, humanhuman

TSL 2

Gene SKA2, Length 570 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA2-209ENST00000583976 MGLLQ99685 303 aa12.87□□□□□ -0.35
SKA2-209ENST00000583976 MMP27Q9H306 513 aa12.87□□□□□ -0.35
SKA2-209ENST00000583976 TAS2R4Q9NYW5 299 aa12.87□□□□□ -0.35
SKA2-209ENST00000583976 RNF114Q9Y508 228 aa12.87□□□□□ -0.35
SKA2-209ENST00000583976 TRAV38-1A0A0B4J264 116 aa12.86□□□□□ -0.35
SKA2-209ENST00000583976 TRBV5-5A0A0J9YX44 114 aa12.86□□□□□ -0.35
SKA2-209ENST00000583976 SYNGR1O43759 233 aa12.86□□□□□ -0.35
SKA2-209ENST00000583976 MRPS14O60783 128 aaKnown RBP12.86□□□□□ -0.35
SKA2-209ENST00000583976 LHBP01229 141 aa12.86□□□□□ -0.35
SKA2-209ENST00000583976 CD1AP06126 327 aa12.86□□□□□ -0.35
SKA2-209ENST00000583976 SELLP14151 372 aa12.86□□□□□ -0.35
SKA2-209ENST00000583976 PRKACBP22694 351 aa12.86□□□□□ -0.35
SKA2-209ENST00000583976 ATP1B3P54709 279 aa12.86□□□□□ -0.35
SKA2-209ENST00000583976 MTCP1P56278 107 aa12.86□□□□□ -0.35
SKA2-209ENST00000583976 PROK1P58294 105 aa12.86□□□□□ -0.35
SKA2-209ENST00000583976 BPIFB3P59826 476 aa12.86□□□□□ -0.35
SKA2-209ENST00000583976 KLRD1Q13241 179 aa12.86□□□□□ -0.35
SKA2-209ENST00000583976 INSL4Q14641 139 aa12.86□□□□□ -0.35
SKA2-209ENST00000583976 KCNJ8Q15842 424 aa12.86□□□□□ -0.35
SKA2-209ENST00000583976 Q499Y3 187 aa12.86□□□□□ -0.35
SKA2-209ENST00000583976 ZNF367Q7RTV3 350 aa12.86□□□□□ -0.35
SKA2-209ENST00000583976 RNF144BQ7Z419 303 aa12.86□□□□□ -0.35
SKA2-209ENST00000583976 VMO1Q7Z5L0 202 aa12.86□□□□□ -0.35
SKA2-209ENST00000583976 LDLRAD3Q86YD5 345 aa12.86□□□□□ -0.35
SKA2-209ENST00000583976 CALHM1Q8IU99 346 aa12.86□□□□□ -0.35
SKA2-209ENST00000583976 PNLDC1Q8NA58 520 aaKnown RBP12.86□□□□□ -0.35
SKA2-209ENST00000583976 TMEM203Q969S6 136 aa12.86□□□□□ -0.35
SKA2-209ENST00000583976 RFT1Q96AA3 541 aa12.86□□□□□ -0.35
SKA2-209ENST00000583976 ZNF488Q96MN9 340 aa12.86□□□□□ -0.35
SKA2-209ENST00000583976 OPALINQ96PE5 141 aa12.86□□□□□ -0.35
SKA2-209ENST00000583976 SIRT7Q9NRC8 400 aa12.86□□□□□ -0.35
SKA2-209ENST00000583976 DNAJB11Q9UBS4 358 aa12.86□□□□□ -0.35
SKA2-209ENST00000583976 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP12.85□□□□□ -0.35
SKA2-209ENST00000583976 M0QZ24 198 aa12.85□□□□□ -0.35
SKA2-209ENST00000583976 SULT1B1O43704 296 aa12.85□□□□□ -0.35
SKA2-209ENST00000583976 TFF1P04155 84 aa12.85□□□□□ -0.35
SKA2-209ENST00000583976 HCKP08631 526 aa12.85□□□□□ -0.35
SKA2-209ENST00000583976 RAB3AP20336 220 aa12.85□□□□□ -0.35
SKA2-209ENST00000583976 POU3F4P49335 361 aa12.85□□□□□ -0.35
SKA2-209ENST00000583976 RBP2P50120 134 aa12.85□□□□□ -0.35
SKA2-209ENST00000583976 MLLT11Q13015 90 aaPredicted RBP12.85□□□□□ -0.35
SKA2-209ENST00000583976 TAF9Q16594 264 aa12.85□□□□□ -0.35
SKA2-209ENST00000583976 KCTD21Q4G0X4 260 aa12.85□□□□□ -0.35
SKA2-209ENST00000583976 ZNF773Q6PK81 442 aa12.85□□□□□ -0.35
SKA2-209ENST00000583976 OR51A2Q8NGJ7 313 aa12.85□□□□□ -0.35
SKA2-209ENST00000583976 ZNF671Q8TAW3 534 aa12.85□□□□□ -0.35
SKA2-209ENST00000583976 DYRK2Q92630 601 aa12.85□□□□□ -0.35
SKA2-209ENST00000583976 WDR13Q9H1Z4 485 aa12.85□□□□□ -0.35
SKA2-209ENST00000583976 ISYNA1Q9NPH2 558 aa12.85□□□□□ -0.35
SKA2-209ENST00000583976 SNTG1Q9NSN8 517 aa12.85□□□□□ -0.35
SKA2-209ENST00000583976 ONECUT1Q9UBC0 465 aa12.85□□□□□ -0.35
SKA2-209ENST00000583976 RPUSD1Q9UJJ7 312 aaKnown RBP12.85□□□□□ -0.35
SKA2-209ENST00000583976 A0A1W2PRD5 423 aa12.84□□□□□ -0.35
SKA2-209ENST00000583976 A0A1W2PRF3 423 aa12.84□□□□□ -0.35
SKA2-209ENST00000583976 A0A1W2PRM7 423 aa12.84□□□□□ -0.35
SKA2-209ENST00000583976 J3QT63 122 aa12.84□□□□□ -0.35
SKA2-209ENST00000583976 LIPFP07098 398 aa12.84□□□□□ -0.35
SKA2-209ENST00000583976 CPEP16870 476 aa12.84□□□□□ -0.35
SKA2-209ENST00000583976 GLRA1P23415 457 aa12.84□□□□□ -0.35
SKA2-209ENST00000583976 IER3P46695 156 aa12.84□□□□□ -0.35
SKA2-209ENST00000583976 RPS25P62851 125 aaKnown RBP12.84□□□□□ -0.35
SKA2-209ENST00000583976 TPBGQ13641 420 aa12.84□□□□□ -0.35
SKA2-209ENST00000583976 PDCD1Q15116 288 aa12.84□□□□□ -0.35
SKA2-209ENST00000583976 ACSM3Q53FZ2 586 aa12.84□□□□□ -0.35
SKA2-209ENST00000583976 TEX36Q5VZQ5 186 aa12.84□□□□□ -0.35
SKA2-209ENST00000583976 HIST2H2BDQ6DRA6 164 aa12.84□□□□□ -0.35
SKA2-209ENST00000583976 Q6ZSV7 163 aa12.84□□□□□ -0.35
SKA2-209ENST00000583976 LHFPL2Q6ZUX7 228 aa12.84□□□□□ -0.35
SKA2-209ENST00000583976 PNKDQ8N490 385 aa12.84□□□□□ -0.35
SKA2-209ENST00000583976 MS4A15Q8N5U1 240 aa12.84□□□□□ -0.35
SKA2-209ENST00000583976 DNAAF1Q8NEP3 725 aa12.84□□□□□ -0.35
SKA2-209ENST00000583976 OR5T2Q8NGG2 359 aa12.84□□□□□ -0.35
SKA2-209ENST00000583976 OR5D18Q8NGL1 313 aa12.84□□□□□ -0.35
SKA2-209ENST00000583976 OR10Z1Q8NGY1 313 aa12.84□□□□□ -0.35
SKA2-209ENST00000583976 SLAMF9Q96A28 289 aa12.84□□□□□ -0.35
SKA2-209ENST00000583976 SPSB1Q96BD6 273 aa12.84□□□□□ -0.35
SKA2-209ENST00000583976 CCL13Q99616 98 aa12.84□□□□□ -0.35
SKA2-209ENST00000583976 NKX3-1Q99801 234 aaPredicted RBP12.84□□□□□ -0.35
SKA2-209ENST00000583976 A0A0G2JK05 382 aa12.83□□□□□ -0.36
SKA2-209ENST00000583976 TIMM23O14925 209 aa12.83□□□□□ -0.36
SKA2-209ENST00000583976 MAGEB3O15480 346 aa12.83□□□□□ -0.36
SKA2-209ENST00000583976 TNFAIP8O95379 198 aa12.83□□□□□ -0.36
SKA2-209ENST00000583976 AMY2BP19961 511 aa12.83□□□□□ -0.36
SKA2-209ENST00000583976 PSMB9P28065 219 aa12.83□□□□□ -0.36
SKA2-209ENST00000583976 TGFBR2P37173 567 aa12.83□□□□□ -0.36
SKA2-209ENST00000583976 PPP3R1P63098 170 aa12.83□□□□□ -0.36
SKA2-209ENST00000583976 GPR50Q13585 617 aa12.83□□□□□ -0.36
SKA2-209ENST00000583976 MICBQ29980 383 aa12.83□□□□□ -0.36
SKA2-209ENST00000583976 SLC25A26Q70HW3 274 aa12.83□□□□□ -0.36
SKA2-209ENST00000583976 SATL1Q86VE3 508 aa12.83□□□□□ -0.36
SKA2-209ENST00000583976 OR52N4Q8NGI2 321 aa12.83□□□□□ -0.36
SKA2-209ENST00000583976 TBC1D15Q8TC07 691 aa12.83□□□□□ -0.36
SKA2-209ENST00000583976 DERL3Q96Q80 235 aa12.83□□□□□ -0.36
SKA2-209ENST00000583976 NEK6Q9HC98 313 aa12.83□□□□□ -0.36
SKA2-209ENST00000583976 ZNRD1Q9P1U0 126 aa12.83□□□□□ -0.36
SKA2-209ENST00000583976 POLDIP2Q9Y2S7 368 aa12.83□□□□□ -0.36
SKA2-209ENST00000583976 TRAV8-7A0A075B6U6 113 aa12.82□□□□□ -0.36
SKA2-209ENST00000583976 TRBV5-7A0A0A0MS05 114 aa12.82□□□□□ -0.36
SKA2-209ENST00000583976 RNASEK-C17orf49H0YIS7 233 aa12.82□□□□□ -0.36
SKA2-209ENST00000583976 PIN1P1O15428 100 aa12.82□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 54.3 ms