RNA–Protein interactions for RNA: ENST00000583294.1

SMARCE1-219, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 2

Gene SMARCE1, Length 476 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-219ENST00000583294 ZNF404Q494X3 552 aa2.63□□□□□ -1.99
SMARCE1-219ENST00000583294 GAPTQ8N292 157 aa2.63□□□□□ -1.99
SMARCE1-219ENST00000583294 OR8S1Q8NH09 359 aa2.63□□□□□ -1.99
SMARCE1-219ENST00000583294 UBA3Q8TBC4 463 aa2.63□□□□□ -1.99
SMARCE1-219ENST00000583294 SYT4Q9H2B2 425 aa2.63□□□□□ -1.99
SMARCE1-219ENST00000583294 ACOT13Q9NPJ3 140 aa2.63□□□□□ -1.99
SMARCE1-219ENST00000583294 ZNF586Q9NXT0 402 aa2.63□□□□□ -1.99
SMARCE1-219ENST00000583294 STMN3Q9NZ72 180 aa2.63□□□□□ -1.99
SMARCE1-219ENST00000583294 ACOT9Q9Y305 439 aa2.63□□□□□ -1.99
SMARCE1-219ENST00000583294 PLXNB3Q9ULL4 1909 aa2.63□□□□□ -1.99
SMARCE1-219ENST00000583294 GSTTP1A0A1W2PQM5 241 aa2.62□□□□□ -1.99
SMARCE1-219ENST00000583294 OR2AT4A6NND4 320 aa2.62□□□□□ -1.99
SMARCE1-219ENST00000583294 C15orf65H3BRN8 121 aa2.62□□□□□ -1.99
SMARCE1-219ENST00000583294 ISLRO14498 428 aa2.62□□□□□ -1.99
SMARCE1-219ENST00000583294 COX7A2P2O60397 106 aa2.62□□□□□ -1.99
SMARCE1-219ENST00000583294 TRGV3P03979 118 aa2.62□□□□□ -1.99
SMARCE1-219ENST00000583294 NUP62P37198 522 aaPredicted RBP2.62□□□□□ -1.99
SMARCE1-219ENST00000583294 HTR2BP41595 481 aa2.62□□□□□ -1.99
SMARCE1-219ENST00000583294 XIAPP98170 497 aa2.62□□□□□ -1.99
SMARCE1-219ENST00000583294 GPR176Q14439 515 aa2.62□□□□□ -1.99
SMARCE1-219ENST00000583294 ATP6AP1LQ52LC2 224 aa2.62□□□□□ -1.99
SMARCE1-219ENST00000583294 ACTBL2Q562R1 376 aa2.62□□□□□ -1.99
SMARCE1-219ENST00000583294 UBE2NLQ5JXB2 153 aa2.62□□□□□ -1.99
SMARCE1-219ENST00000583294 WDR59Q6PJI9 974 aa2.62□□□□□ -1.99
SMARCE1-219ENST00000583294 CLHC1Q8NHS4 586 aa2.62□□□□□ -1.99
SMARCE1-219ENST00000583294 ACTL9Q8TC94 416 aa2.62□□□□□ -1.99
SMARCE1-219ENST00000583294 C2orf15Q8WU43 125 aaKnown RBP2.62□□□□□ -1.99
SMARCE1-219ENST00000583294 CDKL2Q92772 493 aa2.62□□□□□ -1.99
SMARCE1-219ENST00000583294 VAT1Q99536 393 aa2.62□□□□□ -1.99
SMARCE1-219ENST00000583294 PRORYQ9H606 182 aa2.62□□□□□ -1.99
SMARCE1-219ENST00000583294 WDR55Q9H6Y2 383 aaPredicted RBP2.62□□□□□ -1.99
SMARCE1-219ENST00000583294 VAPAQ9P0L0 249 aa2.62□□□□□ -1.99
SMARCE1-219ENST00000583294 ICOSQ9Y6W8 199 aa2.62□□□□□ -1.99
SMARCE1-219ENST00000583294 PLXNB1O43157 2135 aa2.62□□□□□ -1.99
SMARCE1-219ENST00000583294 LTBP4Q8N2S1 1624 aa2.61□□□□□ -1.99
SMARCE1-219ENST00000583294 H3BQ85 93 aa2.61□□□□□ -1.99
SMARCE1-219ENST00000583294 IGHMP01871 453 aa2.61□□□□□ -1.99
SMARCE1-219ENST00000583294 XKP51811 444 aa2.61□□□□□ -1.99
SMARCE1-219ENST00000583294 STX4Q12846 297 aa2.61□□□□□ -1.99
SMARCE1-219ENST00000583294 ENDOGQ14249 297 aaKnown RBP2.61□□□□□ -1.99
SMARCE1-219ENST00000583294 ZNF141Q15928 474 aa2.61□□□□□ -1.99
SMARCE1-219ENST00000583294 TTMPQ5BVD1 217 aa2.61□□□□□ -1.99
SMARCE1-219ENST00000583294 AMMECR1LQ6DCA0 310 aa2.61□□□□□ -1.99
SMARCE1-219ENST00000583294 CLEC18BQ6UXF7 455 aa2.61□□□□□ -1.99
SMARCE1-219ENST00000583294 USP50Q70EL3 339 aaPredicted RBP2.61□□□□□ -1.99
SMARCE1-219ENST00000583294 SYS1Q8N2H4 156 aa2.61□□□□□ -1.99
SMARCE1-219ENST00000583294 OR6K2Q8NGY2 324 aa2.61□□□□□ -1.99
SMARCE1-219ENST00000583294 DOK4Q8TEW6 326 aa2.61□□□□□ -1.99
SMARCE1-219ENST00000583294 IGF2BP2-AS1Q96M15 143 aa2.61□□□□□ -1.99
SMARCE1-219ENST00000583294 COPS4Q9BT78 406 aa2.61□□□□□ -1.99
SMARCE1-219ENST00000583294 NLE1Q9NVX2 485 aaPredicted RBP2.61□□□□□ -1.99
SMARCE1-219ENST00000583294 RBM12B-AS1Q9P1G2 102 aa2.61□□□□□ -1.99
SMARCE1-219ENST00000583294 MROH5Q6ZUA9 1318 aa2.61□□□□□ -1.99
SMARCE1-219ENST00000583294 SSH2Q76I76 1423 aa2.6□□□□□ -1.99
SMARCE1-219ENST00000583294 GMNCA6NCL1 334 aa2.6□□□□□ -1.99
SMARCE1-219ENST00000583294 RBFOX3A6NFN3 312 aa2.6□□□□□ -1.99
SMARCE1-219ENST00000583294 CCL23P55773 120 aa2.6□□□□□ -1.99
SMARCE1-219ENST00000583294 GUSBP1Q15486 140 aa2.6□□□□□ -1.99
SMARCE1-219ENST00000583294 CEACAM16Q2WEN9 425 aa2.6□□□□□ -1.99
SMARCE1-219ENST00000583294 RESP18Q5W5W9 173 aa2.6□□□□□ -1.99
SMARCE1-219ENST00000583294 CYP4Z1Q86W10 505 aa2.6□□□□□ -1.99
SMARCE1-219ENST00000583294 AMN1Q8IY45 258 aa2.6□□□□□ -1.99
SMARCE1-219ENST00000583294 PDCL2Q8N4E4 241 aa2.6□□□□□ -1.99
SMARCE1-219ENST00000583294 BLNKQ8WV28 456 aa2.6□□□□□ -1.99
SMARCE1-219ENST00000583294 FMC1Q96HJ9 113 aa2.6□□□□□ -1.99
SMARCE1-219ENST00000583294 ZNF396Q96N95 335 aaPredicted RBP2.6□□□□□ -1.99
SMARCE1-219ENST00000583294 YPEL4Q96NS1 127 aa2.6□□□□□ -1.99
SMARCE1-219ENST00000583294 HINT2Q9BX68 163 aa2.6□□□□□ -1.99
SMARCE1-219ENST00000583294 ZNF436Q9C0F3 470 aaPredicted RBP2.6□□□□□ -1.99
SMARCE1-219ENST00000583294 TRAPPC1Q9Y5R8 145 aa2.6□□□□□ -1.99
SMARCE1-219ENST00000583294 K7EPK0 472 aa2.59□□□□□ -1.99
SMARCE1-219ENST00000583294 K7ERS5 55 aa2.59□□□□□ -1.99
SMARCE1-219ENST00000583294 VAPBO95292 243 aa2.59□□□□□ -1.99
SMARCE1-219ENST00000583294 CD8AP01732 235 aa2.59□□□□□ -1.99
SMARCE1-219ENST00000583294 M6PRP20645 277 aa2.59□□□□□ -1.99
SMARCE1-219ENST00000583294 BGNP21810 368 aa2.59□□□□□ -1.99
SMARCE1-219ENST00000583294 RANBP1P43487 201 aa2.59□□□□□ -1.99
SMARCE1-219ENST00000583294 BNIP2Q12982 314 aa2.59□□□□□ -1.99
SMARCE1-219ENST00000583294 KRTAP25-1Q3LHN0 102 aa2.59□□□□□ -1.99
SMARCE1-219ENST00000583294 Q499Y3 187 aa2.59□□□□□ -1.99
SMARCE1-219ENST00000583294 ACTL10Q5JWF8 245 aa2.59□□□□□ -1.99
SMARCE1-219ENST00000583294 KRTAP5-7Q6L8G8 165 aa2.59□□□□□ -1.99
SMARCE1-219ENST00000583294 FAHD1Q6P587 224 aa2.59□□□□□ -1.99
SMARCE1-219ENST00000583294 KRTAP13-1Q8IUC0 172 aa2.59□□□□□ -1.99
SMARCE1-219ENST00000583294 OR6K3Q8NGY3 331 aa2.59□□□□□ -1.99
SMARCE1-219ENST00000583294 OR51Q1Q8NH59 317 aa2.59□□□□□ -1.99
SMARCE1-219ENST00000583294 LRRC39Q96DD0 335 aa2.59□□□□□ -1.99
SMARCE1-219ENST00000583294 CIB1Q99828 191 aa2.59□□□□□ -1.99
SMARCE1-219ENST00000583294 ABCG5Q9H222 651 aa2.59□□□□□ -1.99
SMARCE1-219ENST00000583294 DNAJC27Q9NZQ0 273 aa2.59□□□□□ -1.99
SMARCE1-219ENST00000583294 E7EWF7 191 aa2.58□□□□□ -2
SMARCE1-219ENST00000583294 UPK2O00526 184 aa2.58□□□□□ -2
SMARCE1-219ENST00000583294 GYG2O15488 501 aa2.58□□□□□ -2
SMARCE1-219ENST00000583294 SLC37A4O43826 429 aa2.58□□□□□ -2
SMARCE1-219ENST00000583294 PTHLHP12272 177 aa2.58□□□□□ -2
SMARCE1-219ENST00000583294 LGALS3P17931 250 aaKnown RBP2.58□□□□□ -2
SMARCE1-219ENST00000583294 IL12BP29460 328 aa2.58□□□□□ -2
SMARCE1-219ENST00000583294 CLEC12AQ5QGZ9 265 aa2.58□□□□□ -2
SMARCE1-219ENST00000583294 ZNF470Q6ECI4 717 aa2.58□□□□□ -2
SMARCE1-219ENST00000583294 HCP5Q6MZN7 132 aa2.58□□□□□ -2
Retrieved 100 of 20,778 RNA–protein pairs in 68.4 ms