RNA–Protein interactions for RNA: ENST00000582955.5

SMARCE1-218, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 5

Gene SMARCE1, Length 621 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-218ENST00000582955 IGKV1D-12P01611 117 aa10.37□□□□□ -0.75
SMARCE1-218ENST00000582955 CELP19835 753 aa10.37□□□□□ -0.75
SMARCE1-218ENST00000582955 BPIFB3P59826 476 aa10.37□□□□□ -0.75
SMARCE1-218ENST00000582955 RPL31P62899 125 aaKnown RBP10.37□□□□□ -0.75
SMARCE1-218ENST00000582955 YIF1BQ5BJH7 314 aa10.37□□□□□ -0.75
SMARCE1-218ENST00000582955 ASPHD2Q6ICH7 369 aa10.37□□□□□ -0.75
SMARCE1-218ENST00000582955 C9orf139Q6ZV77 190 aa10.37□□□□□ -0.75
SMARCE1-218ENST00000582955 SAXO1Q8IYX7 474 aa10.37□□□□□ -0.75
SMARCE1-218ENST00000582955 OR4M1Q8NGD0 313 aa10.37□□□□□ -0.75
SMARCE1-218ENST00000582955 SGCDQ92629 289 aa10.37□□□□□ -0.75
SMARCE1-218ENST00000582955 ORAI1Q96D31 301 aa10.37□□□□□ -0.75
SMARCE1-218ENST00000582955 PGLYRP3Q96LB9 341 aa10.37□□□□□ -0.75
SMARCE1-218ENST00000582955 CNBD2Q96M20 576 aa10.37□□□□□ -0.75
SMARCE1-218ENST00000582955 ZNF48Q96MX3 618 aaPredicted RBP10.37□□□□□ -0.75
SMARCE1-218ENST00000582955 MND1Q9BWT6 205 aa10.37□□□□□ -0.75
SMARCE1-218ENST00000582955 FAM192AQ9GZU8 254 aa10.37□□□□□ -0.75
SMARCE1-218ENST00000582955 FAM234AQ9H0X4 552 aa10.37□□□□□ -0.75
SMARCE1-218ENST00000582955 C19orf12Q9NSK7 152 aa10.37□□□□□ -0.75
SMARCE1-218ENST00000582955 PAK1IP1Q9NWT1 392 aaPredicted RBP10.37□□□□□ -0.75
SMARCE1-218ENST00000582955 GLS2Q9UI32 602 aa10.37□□□□□ -0.75
SMARCE1-218ENST00000582955 GSTK1Q9Y2Q3 226 aa10.37□□□□□ -0.75
SMARCE1-218ENST00000582955 PCDHGB5Q9Y5G0 923 aa10.37□□□□□ -0.75
SMARCE1-218ENST00000582955 COL6A5A8TX70 2615 aa10.37□□□□□ -0.75
SMARCE1-218ENST00000582955 IGHV1-69DA0A0B4J2H0 117 aa10.36□□□□□ -0.75
SMARCE1-218ENST00000582955 TRBV5-5A0A0J9YX44 114 aa10.36□□□□□ -0.75
SMARCE1-218ENST00000582955 MDFIC2A0A1B0GVS7 189 aa10.36□□□□□ -0.75
SMARCE1-218ENST00000582955 A0A1W2PPH5 198 aa10.36□□□□□ -0.75
SMARCE1-218ENST00000582955 K7N7A8 449 aa10.36□□□□□ -0.75
SMARCE1-218ENST00000582955 M0R1W7 72 aa10.36□□□□□ -0.75
SMARCE1-218ENST00000582955 GABRPO00591 440 aa10.36□□□□□ -0.75
SMARCE1-218ENST00000582955 KDM4BO94953 1096 aa10.36□□□□□ -0.75
SMARCE1-218ENST00000582955 IGHV1-69P01742 117 aa10.36□□□□□ -0.75
SMARCE1-218ENST00000582955 GABRR1P24046 479 aa10.36□□□□□ -0.75
SMARCE1-218ENST00000582955 VHLP40337 213 aa10.36□□□□□ -0.75
SMARCE1-218ENST00000582955 DLX1P56177 255 aa10.36□□□□□ -0.75
SMARCE1-218ENST00000582955 EDDM3BP56851 147 aa10.36□□□□□ -0.75
SMARCE1-218ENST00000582955 ZP1P60852 638 aa10.36□□□□□ -0.75
SMARCE1-218ENST00000582955 PRB3Q04118 309 aaPredicted RBP10.36□□□□□ -0.75
SMARCE1-218ENST00000582955 BAMBIQ13145 260 aa10.36□□□□□ -0.75
SMARCE1-218ENST00000582955 Q499Y3 187 aa10.36□□□□□ -0.75
SMARCE1-218ENST00000582955 SPIN3Q5JUX0 258 aa10.36□□□□□ -0.75
SMARCE1-218ENST00000582955 DDI2Q5TDH0 399 aa10.36□□□□□ -0.75
SMARCE1-218ENST00000582955 ZNF529Q6P280 563 aa10.36□□□□□ -0.75
SMARCE1-218ENST00000582955 CRIP3Q6Q6R5 217 aa10.36□□□□□ -0.75
SMARCE1-218ENST00000582955 GDPD3Q7L5L3 318 aa10.36□□□□□ -0.75
SMARCE1-218ENST00000582955 Q8N7P7 452 aa10.36□□□□□ -0.75
SMARCE1-218ENST00000582955 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP10.36□□□□□ -0.75
SMARCE1-218ENST00000582955 ZDHHC22Q8N966 263 aa10.36□□□□□ -0.75
SMARCE1-218ENST00000582955 ZSCAN4Q8NAM6 433 aaPredicted RBP10.36□□□□□ -0.75
SMARCE1-218ENST00000582955 OR52N4Q8NGI2 321 aa10.36□□□□□ -0.75
SMARCE1-218ENST00000582955 TNFAIP8L1Q8WVP5 186 aa10.36□□□□□ -0.75
SMARCE1-218ENST00000582955 ZDHHC16Q969W1 377 aa10.36□□□□□ -0.75
SMARCE1-218ENST00000582955 DUX5Q96PT3 197 aa10.36□□□□□ -0.75
SMARCE1-218ENST00000582955 OR14A2Q96R54 314 aa10.36□□□□□ -0.75
SMARCE1-218ENST00000582955 HMG20AQ9NP66 347 aa10.36□□□□□ -0.75
SMARCE1-218ENST00000582955 EXOSC4Q9NPD3 245 aaKnown RBP10.36□□□□□ -0.75
SMARCE1-218ENST00000582955 ESM1Q9NQ30 184 aa10.36□□□□□ -0.75
SMARCE1-218ENST00000582955 CKLFQ9UBR5 152 aa10.36□□□□□ -0.75
SMARCE1-218ENST00000582955 A0A1W2PPK0 400 aa10.35□□□□□ -0.75
SMARCE1-218ENST00000582955 TMEM82A0PJX8 343 aa10.35□□□□□ -0.75
SMARCE1-218ENST00000582955 DNAJC9-AS1A6NH13 148 aa10.35□□□□□ -0.75
SMARCE1-218ENST00000582955 SIRPB1O00241 398 aa10.35□□□□□ -0.75
SMARCE1-218ENST00000582955 ZNF737O75373 536 aa10.35□□□□□ -0.75
SMARCE1-218ENST00000582955 BDKRB2P30411 391 aa10.35□□□□□ -0.75
SMARCE1-218ENST00000582955 RPS11P62280 158 aaKnown RBP eCLIP10.35□□□□□ -0.75
SMARCE1-218ENST00000582955 UBA52P62987 128 aaKnown RBP10.35□□□□□ -0.75
SMARCE1-218ENST00000582955 ACTG1P63261 375 aa10.35□□□□□ -0.75
SMARCE1-218ENST00000582955 SLC35A2P78381 396 aa10.35□□□□□ -0.75
SMARCE1-218ENST00000582955 GUCA2AQ02747 115 aa10.35□□□□□ -0.75
SMARCE1-218ENST00000582955 KLRD1Q13241 179 aa10.35□□□□□ -0.75
SMARCE1-218ENST00000582955 DOC2BQ14184 412 aa10.35□□□□□ -0.75
SMARCE1-218ENST00000582955 EDDM3AQ14507 147 aa10.35□□□□□ -0.75
SMARCE1-218ENST00000582955 ZNF146Q15072 292 aa10.35□□□□□ -0.75
SMARCE1-218ENST00000582955 SPHARQ15513 63 aa10.35□□□□□ -0.75
SMARCE1-218ENST00000582955 MED22Q15528 200 aa10.35□□□□□ -0.75
SMARCE1-218ENST00000582955 GRK1Q15835 563 aa10.35□□□□□ -0.75
SMARCE1-218ENST00000582955 DEFB112Q30KQ8 113 aa10.35□□□□□ -0.75
SMARCE1-218ENST00000582955 RNLSQ5VYX0 342 aa10.35□□□□□ -0.75
SMARCE1-218ENST00000582955 TMEM200BQ69YZ2 307 aa10.35□□□□□ -0.75
SMARCE1-218ENST00000582955 OR8H2Q8N162 312 aa10.35□□□□□ -0.75
SMARCE1-218ENST00000582955 TBC1D15Q8TC07 691 aa10.35□□□□□ -0.75
SMARCE1-218ENST00000582955 ZFAND2BQ8WV99 257 aa10.35□□□□□ -0.75
SMARCE1-218ENST00000582955 SNX22Q96L94 193 aa10.35□□□□□ -0.75
SMARCE1-218ENST00000582955 OR5M11Q96RB7 305 aa10.35□□□□□ -0.75
SMARCE1-218ENST00000582955 NKX3-1Q99801 234 aaPredicted RBP10.35□□□□□ -0.75
SMARCE1-218ENST00000582955 CDCA4Q9BXL8 241 aa10.35□□□□□ -0.75
SMARCE1-218ENST00000582955 CCDC90BQ9GZT6 254 aa10.35□□□□□ -0.75
SMARCE1-218ENST00000582955 CHST6Q9GZX3 395 aa10.35□□□□□ -0.75
SMARCE1-218ENST00000582955 METTL8Q9H825 291 aaKnown RBP10.35□□□□□ -0.75
SMARCE1-218ENST00000582955 RHOFQ9HBH0 211 aa10.35□□□□□ -0.75
SMARCE1-218ENST00000582955 TMEM138Q9NPI0 162 aa10.35□□□□□ -0.75
SMARCE1-218ENST00000582955 RAB26Q9ULW5 256 aa10.35□□□□□ -0.75
SMARCE1-218ENST00000582955 A0A1W2PRD5 423 aa10.34□□□□□ -0.75
SMARCE1-218ENST00000582955 A0A1W2PRF3 423 aa10.34□□□□□ -0.75
SMARCE1-218ENST00000582955 A0A1W2PRM7 423 aa10.34□□□□□ -0.75
SMARCE1-218ENST00000582955 MEX3AA1L020 520 aaKnown RBP10.34□□□□□ -0.75
SMARCE1-218ENST00000582955 RNASEK-C17orf49H0YIS7 233 aa10.34□□□□□ -0.75
SMARCE1-218ENST00000582955 SH2D1BO14796 132 aa10.34□□□□□ -0.75
SMARCE1-218ENST00000582955 RGS10O43665 173 aa10.34□□□□□ -0.75
SMARCE1-218ENST00000582955 ALDOBP05062 364 aa10.34□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 70.5 ms