RNA–Protein interactions for RNA: ENST00000580541.1

SKA2-205, Transcript of spindle and kinetochore associated complex subunit 2, humanhuman

TSL 3 BASIC

Gene SKA2, Length 689 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA2-205ENST00000580541 GABRA2P47869 451 aa11.97□□□□□ -0.49
SKA2-205ENST00000580541 CAV3P56539 151 aa11.97□□□□□ -0.49
SKA2-205ENST00000580541 SPCS2Q15005 226 aa11.97□□□□□ -0.49
SKA2-205ENST00000580541 ZMYND11Q15326 602 aa11.97□□□□□ -0.49
SKA2-205ENST00000580541 MPV17LQ2QL34 196 aa11.97□□□□□ -0.49
SKA2-205ENST00000580541 NR2C2APQ86WQ0 139 aa11.97□□□□□ -0.49
SKA2-205ENST00000580541 ZNF561Q8N587 486 aa11.97□□□□□ -0.49
SKA2-205ENST00000580541 OR5D13Q8NGL4 314 aa11.97□□□□□ -0.49
SKA2-205ENST00000580541 OR10K1Q8NGX5 313 aa11.97□□□□□ -0.49
SKA2-205ENST00000580541 RAB39BQ96DA2 213 aa11.97□□□□□ -0.49
SKA2-205ENST00000580541 CMTM3Q96MX0 182 aa11.97□□□□□ -0.49
SKA2-205ENST00000580541 SELENOIQ9C0D9 397 aa11.97□□□□□ -0.49
SKA2-205ENST00000580541 BPESC1Q9GZL8 116 aa11.97□□□□□ -0.49
SKA2-205ENST00000580541 WDR13Q9H1Z4 485 aa11.97□□□□□ -0.49
SKA2-205ENST00000580541 CCDC59Q9P031 241 aaKnown RBP11.97□□□□□ -0.49
SKA2-205ENST00000580541 SPATA2Q9UM82 520 aa11.97□□□□□ -0.49
SKA2-205ENST00000580541 POLQO75417 2590 aa11.97□□□□□ -0.49
SKA2-205ENST00000580541 FBN2P35556 2912 aa11.97□□□□□ -0.49
SKA2-205ENST00000580541 TMEM14DPA8MWL7 114 aa11.96□□□□□ -0.49
SKA2-205ENST00000580541 ZNF205O95201 554 aa11.96□□□□□ -0.49
SKA2-205ENST00000580541 MPIG6BO95866 241 aa11.96□□□□□ -0.49
SKA2-205ENST00000580541 GYPAP02724 150 aa11.96□□□□□ -0.49
SKA2-205ENST00000580541 SLC2A2P11168 524 aaPredicted RBP11.96□□□□□ -0.49
SKA2-205ENST00000580541 PSG2P11465 335 aa11.96□□□□□ -0.49
SKA2-205ENST00000580541 EGR1P18146 543 aa11.96□□□□□ -0.49
SKA2-205ENST00000580541 USF1P22415 310 aaPredicted RBP11.96□□□□□ -0.49
SKA2-205ENST00000580541 NPY4RP50391 375 aa11.96□□□□□ -0.49
SKA2-205ENST00000580541 CLDN12P56749 244 aa11.96□□□□□ -0.49
SKA2-205ENST00000580541 RBM11P57052 281 aaKnown RBP11.96□□□□□ -0.49
SKA2-205ENST00000580541 IL13RA1P78552 427 aa11.96□□□□□ -0.49
SKA2-205ENST00000580541 FAM201AQ5SY85 155 aa11.96□□□□□ -0.49
SKA2-205ENST00000580541 AVPI1Q5T686 147 aa11.96□□□□□ -0.49
SKA2-205ENST00000580541 ANGPTL6Q8NI99 470 aa11.96□□□□□ -0.49
SKA2-205ENST00000580541 DYNC2LI1Q8TCX1 351 aa11.96□□□□□ -0.49
SKA2-205ENST00000580541 NKX3-1Q99801 234 aaPredicted RBP11.96□□□□□ -0.49
SKA2-205ENST00000580541 TMEM246Q9BRR3 403 aa11.96□□□□□ -0.49
SKA2-205ENST00000580541 DCAF16Q9NXF7 216 aa11.96□□□□□ -0.49
SKA2-205ENST00000580541 KAAG1Q9UBP8 84 aa11.96□□□□□ -0.49
SKA2-205ENST00000580541 OR14J1Q9UGF5 321 aa11.96□□□□□ -0.49
SKA2-205ENST00000580541 ITPR2Q14571 2701 aa11.96□□□□□ -0.49
SKA2-205ENST00000580541 NBPF19A0A087WUL8 3843 aa11.96□□□□□ -0.5
SKA2-205ENST00000580541 NOTCH2Q04721 2471 aa11.95□□□□□ -0.5
SKA2-205ENST00000580541 IGHV3OR15-7A0A075B7D8 119 aa11.95□□□□□ -0.5
SKA2-205ENST00000580541 VWC2LB2RUY7 222 aa11.95□□□□□ -0.5
SKA2-205ENST00000580541 F8VVB4 439 aa11.95□□□□□ -0.5
SKA2-205ENST00000580541 F8VWA3 439 aa11.95□□□□□ -0.5
SKA2-205ENST00000580541 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP11.95□□□□□ -0.5
SKA2-205ENST00000580541 GPR37O15354 613 aa11.95□□□□□ -0.5
SKA2-205ENST00000580541 TMPRSS2O15393 492 aa11.95□□□□□ -0.5
SKA2-205ENST00000580541 ADAM20O43506 726 aa11.95□□□□□ -0.5
SKA2-205ENST00000580541 NDUFB3O43676 98 aa11.95□□□□□ -0.5
SKA2-205ENST00000580541 HAND1O96004 215 aa11.95□□□□□ -0.5
SKA2-205ENST00000580541 ZNF44P15621 663 aa11.95□□□□□ -0.5
SKA2-205ENST00000580541 RPS27AP62979 156 aaKnown RBP11.95□□□□□ -0.5
SKA2-205ENST00000580541 QRFPP83859 136 aa11.95□□□□□ -0.5
SKA2-205ENST00000580541 SCN1BQ07699 218 aa11.95□□□□□ -0.5
SKA2-205ENST00000580541 IKZF1Q13422 519 aa11.95□□□□□ -0.5
SKA2-205ENST00000580541 RBM39Q14498 530 aaKnown RBP11.95□□□□□ -0.5
SKA2-205ENST00000580541 ARL6IP1Q15041 203 aa11.95□□□□□ -0.5
SKA2-205ENST00000580541 C11orf91Q3C1V1 193 aa11.95□□□□□ -0.5
SKA2-205ENST00000580541 LRRC10Q5BKY1 277 aa11.95□□□□□ -0.5
SKA2-205ENST00000580541 STUMQ69YW2 141 aa11.95□□□□□ -0.5
SKA2-205ENST00000580541 RAB12Q6IQ22 244 aa11.95□□□□□ -0.5
SKA2-205ENST00000580541 OR5T2Q8NGG2 359 aa11.95□□□□□ -0.5
SKA2-205ENST00000580541 OR8B3Q8NGG8 313 aa11.95□□□□□ -0.5
SKA2-205ENST00000580541 OR56B1Q8NGI3 324 aa11.95□□□□□ -0.5
SKA2-205ENST00000580541 RAB40AQ8WXH6 277 aa11.95□□□□□ -0.5
SKA2-205ENST00000580541 FAM46BQ96A09 425 aa11.95□□□□□ -0.5
SKA2-205ENST00000580541 NEIL1Q96FI4 390 aaPredicted RBP11.95□□□□□ -0.5
SKA2-205ENST00000580541 S100A16Q96FQ6 103 aaKnown RBP11.95□□□□□ -0.5
SKA2-205ENST00000580541 SDSLQ96GA7 329 aa11.95□□□□□ -0.5
SKA2-205ENST00000580541 C1orf147Q96MC9 270 aaPredicted RBP11.95□□□□□ -0.5
SKA2-205ENST00000580541 NEDD4LQ96PU5 975 aa11.95□□□□□ -0.5
SKA2-205ENST00000580541 OR8B2Q96RD0 313 aa11.95□□□□□ -0.5
SKA2-205ENST00000580541 FAM234AQ9H0X4 552 aa11.95□□□□□ -0.5
SKA2-205ENST00000580541 BANF2Q9H503 90 aa11.95□□□□□ -0.5
SKA2-205ENST00000580541 IFT22Q9H7X7 185 aa11.95□□□□□ -0.5
SKA2-205ENST00000580541 OR5V1Q9UGF6 321 aa11.95□□□□□ -0.5
SKA2-205ENST00000580541 ADAM30Q9UKF2 790 aa11.95□□□□□ -0.5
SKA2-205ENST00000580541 ITGB1BP2Q9UKP3 347 aa11.95□□□□□ -0.5
SKA2-205ENST00000580541 ASH1LQ9NR48 2969 aaKnown RBP11.94□□□□□ -0.5
SKA2-205ENST00000580541 IGHV4-30-2A0A087WSY4 118 aa11.94□□□□□ -0.5
SKA2-205ENST00000580541 TMEM272A0A1B0GTI8 110 aa11.94□□□□□ -0.5
SKA2-205ENST00000580541 FUOMA2VDF0 154 aa11.94□□□□□ -0.5
SKA2-205ENST00000580541 OR7C1O76099 320 aaPredicted RBP11.94□□□□□ -0.5
SKA2-205ENST00000580541 GLAP06280 429 aa11.94□□□□□ -0.5
SKA2-205ENST00000580541 RPS2P15880 293 aaKnown RBP11.94□□□□□ -0.5
SKA2-205ENST00000580541 FUT3P21217 361 aa11.94□□□□□ -0.5
SKA2-205ENST00000580541 LMO1P25800 156 aa11.94□□□□□ -0.5
SKA2-205ENST00000580541 KCNJ3P48549 501 aa11.94□□□□□ -0.5
SKA2-205ENST00000580541 PITPNBP48739 271 aa11.94□□□□□ -0.5
SKA2-205ENST00000580541 ZNF788Q6ZQV5 615 aa11.94□□□□□ -0.5
SKA2-205ENST00000580541 BATF2Q8N1L9 274 aa11.94□□□□□ -0.5
SKA2-205ENST00000580541 TMEM104Q8NE00 496 aa11.94□□□□□ -0.5
SKA2-205ENST00000580541 C19orf18Q8NEA5 215 aa11.94□□□□□ -0.5
SKA2-205ENST00000580541 SNX22Q96L94 193 aa11.94□□□□□ -0.5
SKA2-205ENST00000580541 Q96M66 194 aa11.94□□□□□ -0.5
SKA2-205ENST00000580541 Q96MF0 132 aa11.94□□□□□ -0.5
SKA2-205ENST00000580541 TM2D1Q9BX74 207 aa11.94□□□□□ -0.5
SKA2-205ENST00000580541 BARHL1Q9BZE3 327 aa11.94□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms