RNA–Protein interactions for RNA: ENST00000578904.1

CSNK1D-209, Transcript of casein kinase 1 delta, humanhuman

TSL 3

Gene CSNK1D, Length 1,269 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-209ENST00000578904 GABARAPH6UMI1 98 aa11.77□□□□□ -0.53
CSNK1D-209ENST00000578904 IGKV1D-12P01611 117 aa11.77□□□□□ -0.53
CSNK1D-209ENST00000578904 SFTPBP07988 381 aa11.77□□□□□ -0.53
CSNK1D-209ENST00000578904 GSTT2BP0CG30 244 aa11.77□□□□□ -0.53
CSNK1D-209ENST00000578904 PRKACAP17612 351 aa11.77□□□□□ -0.53
CSNK1D-209ENST00000578904 GLRA1P23415 457 aa11.77□□□□□ -0.53
CSNK1D-209ENST00000578904 GABRR1P24046 479 aa11.77□□□□□ -0.53
CSNK1D-209ENST00000578904 DNASE1P24855 282 aa11.77□□□□□ -0.53
CSNK1D-209ENST00000578904 PRSS3P35030 304 aa11.77□□□□□ -0.53
CSNK1D-209ENST00000578904 CDKN1AP38936 164 aa11.77□□□□□ -0.53
CSNK1D-209ENST00000578904 DEFA1P59665 94 aa11.77□□□□□ -0.53
CSNK1D-209ENST00000578904 DEFA3P59666 94 aa11.77□□□□□ -0.53
CSNK1D-209ENST00000578904 PNLIPRP3Q17RR3 467 aa11.77□□□□□ -0.53
CSNK1D-209ENST00000578904 PRAMEF6Q5VXH4 476 aa11.77□□□□□ -0.53
CSNK1D-209ENST00000578904 WDR86Q86TI4 376 aa11.77□□□□□ -0.53
CSNK1D-209ENST00000578904 SNX29P2Q8IUI4 249 aa11.77□□□□□ -0.53
CSNK1D-209ENST00000578904 OR4M2Q8NGB6 313 aa11.77□□□□□ -0.53
CSNK1D-209ENST00000578904 NRIP2Q9BQI9 281 aa11.77□□□□□ -0.53
CSNK1D-209ENST00000578904 SCPEP1Q9HB40 452 aa11.77□□□□□ -0.53
CSNK1D-209ENST00000578904 PLEKHJ1Q9NW61 149 aa11.77□□□□□ -0.53
CSNK1D-209ENST00000578904 RNF7Q9UBF6 113 aa11.77□□□□□ -0.53
CSNK1D-209ENST00000578904 HSF4Q9ULV5 492 aa11.77□□□□□ -0.53
CSNK1D-209ENST00000578904 PPP1R3CQ9UQK1 317 aa11.77□□□□□ -0.53
CSNK1D-209ENST00000578904 TANC2Q9HCD6 1990 aa11.76□□□□□ -0.53
CSNK1D-209ENST00000578904 ISPDA4D126 451 aa11.76□□□□□ -0.53
CSNK1D-209ENST00000578904 SERPINE3A8MV23 424 aa11.76□□□□□ -0.53
CSNK1D-209ENST00000578904 RAB27BO00194 218 aa11.76□□□□□ -0.53
CSNK1D-209ENST00000578904 SH2D1BO14796 132 aa11.76□□□□□ -0.53
CSNK1D-209ENST00000578904 GSTZ1O43708 216 aaPredicted RBP11.76□□□□□ -0.53
CSNK1D-209ENST00000578904 UPK1BO75841 260 aa11.76□□□□□ -0.53
CSNK1D-209ENST00000578904 GLAP06280 429 aa11.76□□□□□ -0.53
CSNK1D-209ENST00000578904 FUT3P21217 361 aa11.76□□□□□ -0.53
CSNK1D-209ENST00000578904 NPBWR2P48146 333 aa11.76□□□□□ -0.53
CSNK1D-209ENST00000578904 RIPPLY3P57055 190 aa11.76□□□□□ -0.53
CSNK1D-209ENST00000578904 AP3S2P59780 193 aa11.76□□□□□ -0.53
CSNK1D-209ENST00000578904 SSBP1Q04837 148 aaKnown RBP11.76□□□□□ -0.53
CSNK1D-209ENST00000578904 SCN1BQ07699 218 aa11.76□□□□□ -0.53
CSNK1D-209ENST00000578904 RBM39Q14498 530 aaKnown RBP11.76□□□□□ -0.53
CSNK1D-209ENST00000578904 ZNF79Q15937 498 aa11.76□□□□□ -0.53
CSNK1D-209ENST00000578904 WDR82Q6UXN9 313 aa11.76□□□□□ -0.53
CSNK1D-209ENST00000578904 MOGAT3Q86VF5 341 aa11.76□□□□□ -0.53
CSNK1D-209ENST00000578904 Q8TCH9 128 aa11.76□□□□□ -0.53
CSNK1D-209ENST00000578904 LRRC29Q8WV35 223 aa11.76□□□□□ -0.53
CSNK1D-209ENST00000578904 NEU4Q8WWR8 484 aaPredicted RBP11.76□□□□□ -0.53
CSNK1D-209ENST00000578904 IGFBPL1Q8WX77 278 aa11.76□□□□□ -0.53
CSNK1D-209ENST00000578904 GTF3AQ92664 365 aaKnown RBP11.76□□□□□ -0.53
CSNK1D-209ENST00000578904 VRK1Q99986 396 aaPredicted RBP11.76□□□□□ -0.53
CSNK1D-209ENST00000578904 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP11.76□□□□□ -0.53
CSNK1D-209ENST00000578904 RBFOX1Q9NWB1 397 aaKnown RBP11.76□□□□□ -0.53
CSNK1D-209ENST00000578904 TAS2R8Q9NYW2 309 aa11.76□□□□□ -0.53
CSNK1D-209ENST00000578904 DNAJB11Q9UBS4 358 aa11.76□□□□□ -0.53
CSNK1D-209ENST00000578904 A0A1W2PP11 408 aa11.75□□□□□ -0.53
CSNK1D-209ENST00000578904 H7C417 338 aa11.75□□□□□ -0.53
CSNK1D-209ENST00000578904 J3QRK9 145 aa11.75□□□□□ -0.53
CSNK1D-209ENST00000578904 OVOL3O00110 214 aa11.75□□□□□ -0.53
CSNK1D-209ENST00000578904 PDCD6O75340 191 aa11.75□□□□□ -0.53
CSNK1D-209ENST00000578904 CA11O75493 328 aa11.75□□□□□ -0.53
CSNK1D-209ENST00000578904 RHBDL1O75783 438 aa11.75□□□□□ -0.53
CSNK1D-209ENST00000578904 RBBP9O75884 186 aa11.75□□□□□ -0.53
CSNK1D-209ENST00000578904 OR7C1O76099 320 aaPredicted RBP11.75□□□□□ -0.53
CSNK1D-209ENST00000578904 ECDO95905 644 aaPredicted RBP11.75□□□□□ -0.53
CSNK1D-209ENST00000578904 KNG1P01042 644 aa11.75□□□□□ -0.53
CSNK1D-209ENST00000578904 HLA-DQB1P01920 261 aa11.75□□□□□ -0.53
CSNK1D-209ENST00000578904 HIST1H1DP16402 221 aaKnown RBP11.75□□□□□ -0.53
CSNK1D-209ENST00000578904 PMELP40967 661 aa11.75□□□□□ -0.53
CSNK1D-209ENST00000578904 CBX5P45973 191 aa11.75□□□□□ -0.53
CSNK1D-209ENST00000578904 PTH2RP49190 550 aa11.75□□□□□ -0.53
CSNK1D-209ENST00000578904 GNG2P59768 71 aa11.75□□□□□ -0.53
CSNK1D-209ENST00000578904 ACTBP60709 375 aa11.75□□□□□ -0.53
CSNK1D-209ENST00000578904 ERVK11-1P61568 191 aa11.75□□□□□ -0.53
CSNK1D-209ENST00000578904 ACTG1P63261 375 aa11.75□□□□□ -0.53
CSNK1D-209ENST00000578904 CCL8P80075 99 aa11.75□□□□□ -0.53
CSNK1D-209ENST00000578904 PLA2G7Q13093 441 aa11.75□□□□□ -0.53
CSNK1D-209ENST00000578904 IKZF1Q13422 519 aa11.75□□□□□ -0.53
CSNK1D-209ENST00000578904 ARFRP1Q13795 201 aa11.75□□□□□ -0.53
CSNK1D-209ENST00000578904 MPPED2Q15777 294 aa11.75□□□□□ -0.53
CSNK1D-209ENST00000578904 TAF9Q16594 264 aa11.75□□□□□ -0.53
CSNK1D-209ENST00000578904 CDNFQ49AH0 187 aa11.75□□□□□ -0.53
CSNK1D-209ENST00000578904 C11orf53Q8IXP5 236 aa11.75□□□□□ -0.53
CSNK1D-209ENST00000578904 IZUMO1Q8IYV9 350 aa11.75□□□□□ -0.53
CSNK1D-209ENST00000578904 SMIM4Q8WVI0 70 aa11.75□□□□□ -0.53
CSNK1D-209ENST00000578904 NINJ1Q92982 152 aa11.75□□□□□ -0.53
CSNK1D-209ENST00000578904 ABHD1Q96SE0 405 aa11.75□□□□□ -0.53
CSNK1D-209ENST00000578904 THAP7Q9BT49 309 aaPredicted RBP11.75□□□□□ -0.53
CSNK1D-209ENST00000578904 AUNIPQ9H7T9 357 aa11.75□□□□□ -0.53
CSNK1D-209ENST00000578904 GCM1Q9NP62 436 aa11.75□□□□□ -0.53
CSNK1D-209ENST00000578904 ABCB10Q9NRK6 738 aa11.75□□□□□ -0.53
CSNK1D-209ENST00000578904 CENPXA8MT69 81 aa11.74□□□□□ -0.53
CSNK1D-209ENST00000578904 SRRM5B3KS81 715 aa11.74□□□□□ -0.53
CSNK1D-209ENST00000578904 MCRIP1C9JLW8 97 aa11.74□□□□□ -0.53
CSNK1D-209ENST00000578904 GEMIN2O14893 280 aaKnown RBP11.74□□□□□ -0.53
CSNK1D-209ENST00000578904 DEGS1O15121 323 aa11.74□□□□□ -0.53
CSNK1D-209ENST00000578904 SOCS1O15524 211 aa11.74□□□□□ -0.53
CSNK1D-209ENST00000578904 LPLP06858 475 aa11.74□□□□□ -0.53
CSNK1D-209ENST00000578904 MELTFP08582 738 aa11.74□□□□□ -0.53
CSNK1D-209ENST00000578904 ZNF146Q15072 292 aa11.74□□□□□ -0.53
CSNK1D-209ENST00000578904 KCNJ8Q15842 424 aa11.74□□□□□ -0.53
CSNK1D-209ENST00000578904 PIGYQ3MUY2 71 aa11.74□□□□□ -0.53
CSNK1D-209ENST00000578904 ZNF260Q3ZCT1 412 aa11.74□□□□□ -0.53
CSNK1D-209ENST00000578904 ATAD3CQ5T2N8 411 aa11.74□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms