RNA–Protein interactions for RNA: ENST00000577539.1

VAPA-203, Transcript of VAMP associated protein A, humanhuman

Gene VAPA, Length 3,760 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPA-203ENST00000577539 NKX6-2Q9C056 277 aaPredicted RBP4.65□□□□□ -1.66
VAPA-203ENST00000577539 METTL9Q9H1A3 318 aa4.65□□□□□ -1.66
VAPA-203ENST00000577539 LDAHQ9H6V9 325 aa4.65□□□□□ -1.66
VAPA-203ENST00000577539 U3KQA8 63 aa4.65□□□□□ -1.66
VAPA-203ENST00000577539 NUP210LQ5VU65 1888 aa4.65□□□□□ -1.67
VAPA-203ENST00000577539 A0A087WZY1 265 aa4.65□□□□□ -1.67
VAPA-203ENST00000577539 CCDC187A0A096LP49 1063 aa4.65□□□□□ -1.67
VAPA-203ENST00000577539 IGHV1-45A0A0A0MS14 117 aa4.65□□□□□ -1.67
VAPA-203ENST00000577539 DHRS7CA6NNS2 312 aa4.65□□□□□ -1.67
VAPA-203ENST00000577539 ZIC3O60481 467 aa4.65□□□□□ -1.67
VAPA-203ENST00000577539 OR2C1O95371 312 aa4.65□□□□□ -1.67
VAPA-203ENST00000577539 PDGFBP01127 241 aaPredicted RBP4.65□□□□□ -1.67
VAPA-203ENST00000577539 UMODP07911 640 aa4.65□□□□□ -1.67
VAPA-203ENST00000577539 PET100P0DJ07 73 aa4.65□□□□□ -1.67
VAPA-203ENST00000577539 OR5H8P0DN80 308 aa4.65□□□□□ -1.67
VAPA-203ENST00000577539 PRF1P14222 555 aa4.65□□□□□ -1.67
VAPA-203ENST00000577539 ZNF32P17041 273 aa4.65□□□□□ -1.67
VAPA-203ENST00000577539 FKBP2P26885 142 aaKnown RBP4.65□□□□□ -1.67
VAPA-203ENST00000577539 RGS19P49795 217 aa4.65□□□□□ -1.67
VAPA-203ENST00000577539 CTAG1AP78358 180 aa4.65□□□□□ -1.67
VAPA-203ENST00000577539 ZNF529Q6P280 563 aa4.65□□□□□ -1.67
VAPA-203ENST00000577539 HAGHLQ6PII5 290 aaPredicted RBP4.65□□□□□ -1.67
VAPA-203ENST00000577539 CLEC9AQ6UXN8 241 aa4.65□□□□□ -1.67
VAPA-203ENST00000577539 SLC16A14Q7RTX9 510 aa4.65□□□□□ -1.67
VAPA-203ENST00000577539 DTX1Q86Y01 620 aa4.65□□□□□ -1.67
VAPA-203ENST00000577539 NEK7Q8TDX7 302 aa4.65□□□□□ -1.67
VAPA-203ENST00000577539 PP6455Q8WZ26 134 aa4.65□□□□□ -1.67
VAPA-203ENST00000577539 EMG1Q92979 244 aaKnown RBP4.65□□□□□ -1.67
VAPA-203ENST00000577539 SGK3Q96BR1 496 aa4.65□□□□□ -1.67
VAPA-203ENST00000577539 FBXO17Q96EF6 278 aa4.65□□□□□ -1.67
VAPA-203ENST00000577539 SRXN1Q9BYN0 137 aa4.65□□□□□ -1.67
VAPA-203ENST00000577539 ZNF442Q9H7R0 627 aa4.65□□□□□ -1.67
VAPA-203ENST00000577539 RAB18Q9NP72 206 aa4.65□□□□□ -1.67
VAPA-203ENST00000577539 MCTS1Q9ULC4 181 aaKnown RBP4.65□□□□□ -1.67
VAPA-203ENST00000577539 FAM96BQ9Y3D0 163 aa4.65□□□□□ -1.67
VAPA-203ENST00000577539 SERPINE3A8MV23 424 aa4.64□□□□□ -1.67
VAPA-203ENST00000577539 ETV2O00321 342 aaPredicted RBP4.64□□□□□ -1.67
VAPA-203ENST00000577539 MED6O75586 246 aa4.64□□□□□ -1.67
VAPA-203ENST00000577539 CBR3O75828 277 aa4.64□□□□□ -1.67
VAPA-203ENST00000577539 IFNA2P01563 188 aa4.64□□□□□ -1.67
VAPA-203ENST00000577539 COX6A1P12074 109 aa4.64□□□□□ -1.67
VAPA-203ENST00000577539 HLA-GP17693 338 aa4.64□□□□□ -1.67
VAPA-203ENST00000577539 TCN2P20062 427 aa4.64□□□□□ -1.67
VAPA-203ENST00000577539 ACKR3P25106 362 aa4.64□□□□□ -1.67
VAPA-203ENST00000577539 GDF1P27539 372 aa4.64□□□□□ -1.67
VAPA-203ENST00000577539 IL11RAQ14626 422 aa4.64□□□□□ -1.67
VAPA-203ENST00000577539 ARL6IP1Q15041 203 aa4.64□□□□□ -1.67
VAPA-203ENST00000577539 CEACAM16Q2WEN9 425 aa4.64□□□□□ -1.67
VAPA-203ENST00000577539 TSPO2Q5TGU0 170 aa4.64□□□□□ -1.67
VAPA-203ENST00000577539 PLCXD3Q63HM9 321 aa4.64□□□□□ -1.67
VAPA-203ENST00000577539 RPL7L1Q6DKI1 246 aaKnown RBP4.64□□□□□ -1.67
VAPA-203ENST00000577539 FAM122CQ6P4D5 195 aa4.64□□□□□ -1.67
VAPA-203ENST00000577539 PRSS54Q6PEW0 395 aa4.64□□□□□ -1.67
VAPA-203ENST00000577539 FBXL14Q8N1E6 418 aa4.64□□□□□ -1.67
VAPA-203ENST00000577539 HAS2Q92819 552 aa4.64□□□□□ -1.67
VAPA-203ENST00000577539 PHYHIPLQ96FC7 376 aa4.64□□□□□ -1.67
VAPA-203ENST00000577539 RTBDNQ9BSG5 229 aaPredicted RBP4.64□□□□□ -1.67
VAPA-203ENST00000577539 NMES1Q9C002 83 aa4.64□□□□□ -1.67
VAPA-203ENST00000577539 CHST5Q9GZS9 411 aa4.64□□□□□ -1.67
VAPA-203ENST00000577539 SAV1Q9H4B6 383 aaPredicted RBP4.64□□□□□ -1.67
VAPA-203ENST00000577539 PCDHB16Q9NRJ7 776 aa4.64□□□□□ -1.67
VAPA-203ENST00000577539 ZNF581Q9P0T4 197 aa4.64□□□□□ -1.67
VAPA-203ENST00000577539 GHRLQ9UBU3 117 aa4.64□□□□□ -1.67
VAPA-203ENST00000577539 KCNIP3Q9Y2W7 256 aa4.64□□□□□ -1.67
VAPA-203ENST00000577539 DNAJC13O75165 2243 aa4.64□□□□□ -1.67
VAPA-203ENST00000577539 SHANK1Q9Y566 2161 aa4.64□□□□□ -1.67
VAPA-203ENST00000577539 COL4A2P08572 1712 aa4.64□□□□□ -1.67
VAPA-203ENST00000577539 A0A0G2JMM0 328 aa4.64□□□□□ -1.67
VAPA-203ENST00000577539 A0A1B0GV50 99 aa4.64□□□□□ -1.67
VAPA-203ENST00000577539 A0A1W2PPB8 328 aa4.64□□□□□ -1.67
VAPA-203ENST00000577539 A0A1W2PRS3 328 aa4.64□□□□□ -1.67
VAPA-203ENST00000577539 GJE1A6NN92 205 aa4.64□□□□□ -1.67
VAPA-203ENST00000577539 KIR3DP1A8MWS1 328 aa4.64□□□□□ -1.67
VAPA-203ENST00000577539 K7EPK0 472 aa4.64□□□□□ -1.67
VAPA-203ENST00000577539 LRP3O75074 770 aa4.64□□□□□ -1.67
VAPA-203ENST00000577539 OR7C1O76099 320 aaPredicted RBP4.64□□□□□ -1.67
VAPA-203ENST00000577539 DIRAS3O95661 229 aa4.64□□□□□ -1.67
VAPA-203ENST00000577539 RCC1P18754 421 aaPredicted RBP4.64□□□□□ -1.67
VAPA-203ENST00000577539 MPZP25189 248 aa4.64□□□□□ -1.67
VAPA-203ENST00000577539 PTGER4P35408 488 aa4.64□□□□□ -1.67
VAPA-203ENST00000577539 SUPT4H1P63272 117 aaKnown RBP4.64□□□□□ -1.67
VAPA-203ENST00000577539 KCNMB1Q16558 191 aa4.64□□□□□ -1.67
VAPA-203ENST00000577539 GUCA2BQ16661 112 aa4.64□□□□□ -1.67
VAPA-203ENST00000577539 C19orf54Q5BKX5 351 aa4.64□□□□□ -1.67
VAPA-203ENST00000577539 PDSS1Q5T2R2 415 aa4.64□□□□□ -1.67
VAPA-203ENST00000577539 H3F3CQ6NXT2 135 aa4.64□□□□□ -1.67
VAPA-203ENST00000577539 TFAP2EQ6VUC0 442 aa4.64□□□□□ -1.67
VAPA-203ENST00000577539 FAM71E2Q8N5Q1 922 aa4.64□□□□□ -1.67
VAPA-203ENST00000577539 OR52H1Q8NGJ2 320 aa4.64□□□□□ -1.67
VAPA-203ENST00000577539 OR2Y1Q8NGV0 311 aa4.64□□□□□ -1.67
VAPA-203ENST00000577539 STOML3Q8TAV4 291 aa4.64□□□□□ -1.67
VAPA-203ENST00000577539 CLDN23Q96B33 292 aa4.64□□□□□ -1.67
VAPA-203ENST00000577539 IMMP1LQ96LU5 166 aa4.64□□□□□ -1.67
VAPA-203ENST00000577539 ANGPTL4Q9BY76 406 aa4.64□□□□□ -1.67
VAPA-203ENST00000577539 DNTTIP1Q9H147 329 aa4.64□□□□□ -1.67
VAPA-203ENST00000577539 C1orf123Q9NWV4 160 aa4.64□□□□□ -1.67
VAPA-203ENST00000577539 ZNF629Q9UEG4 869 aaPredicted RBP4.64□□□□□ -1.67
VAPA-203ENST00000577539 MLXQ9UH92 298 aa4.64□□□□□ -1.67
VAPA-203ENST00000577539 PADI1Q9ULC6 663 aa4.64□□□□□ -1.67
VAPA-203ENST00000577539 HSF4Q9ULV5 492 aa4.64□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 136.5 ms