RNA–Protein interactions for RNA: ENST00000577300.1

SMCHD1-202, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

TSL 3

Gene SMCHD1, Length 506 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-202ENST00000577300 E9PLD3 99 aa2.45□□□□□ -2.02
SMCHD1-202ENST00000577300 F6UZH7 168 aa2.45□□□□□ -2.02
SMCHD1-202ENST00000577300 C15orf65H3BRN8 121 aa2.45□□□□□ -2.02
SMCHD1-202ENST00000577300 K7EN84 100 aa2.45□□□□□ -2.02
SMCHD1-202ENST00000577300 BTN3A3O00478 584 aa2.45□□□□□ -2.02
SMCHD1-202ENST00000577300 MRASO14807 208 aa2.45□□□□□ -2.02
SMCHD1-202ENST00000577300 TRAF3IP2O43734 574 aaPredicted RBP2.45□□□□□ -2.02
SMCHD1-202ENST00000577300 OR1F1O43749 312 aa2.45□□□□□ -2.02
SMCHD1-202ENST00000577300 SSNA1O43805 119 aa2.45□□□□□ -2.02
SMCHD1-202ENST00000577300 OR2B3O76000 313 aa2.45□□□□□ -2.02
SMCHD1-202ENST00000577300 OR2J3O76001 311 aa2.45□□□□□ -2.02
SMCHD1-202ENST00000577300 S1PR2O95136 353 aa2.45□□□□□ -2.02
SMCHD1-202ENST00000577300 MPZL1O95297 269 aa2.45□□□□□ -2.02
SMCHD1-202ENST00000577300 IGHG4P01861 327 aa2.45□□□□□ -2.02
SMCHD1-202ENST00000577300 MT-ND4P03905 459 aa2.45□□□□□ -2.02
SMCHD1-202ENST00000577300 ALDOBP05062 364 aa2.45□□□□□ -2.02
SMCHD1-202ENST00000577300 DCNP07585 359 aaKnown RBP2.45□□□□□ -2.02
SMCHD1-202ENST00000577300 CST2P09228 141 aa2.45□□□□□ -2.02
SMCHD1-202ENST00000577300 CSF3P09919 207 aa2.45□□□□□ -2.02
SMCHD1-202ENST00000577300 CT62P0C5K7 136 aa2.45□□□□□ -2.02
SMCHD1-202ENST00000577300 TSPAN19P0C672 248 aa2.45□□□□□ -2.02
SMCHD1-202ENST00000577300 TBPP20226 339 aa2.45□□□□□ -2.02
SMCHD1-202ENST00000577300 OMGP23515 440 aa2.45□□□□□ -2.02
SMCHD1-202ENST00000577300 HTR2CP28335 458 aa2.45□□□□□ -2.02
SMCHD1-202ENST00000577300 HTR1EP28566 365 aa2.45□□□□□ -2.02
SMCHD1-202ENST00000577300 GGT2P36268 569 aa2.45□□□□□ -2.02
SMCHD1-202ENST00000577300 UQCRFS1P47985 274 aa2.45□□□□□ -2.02
SMCHD1-202ENST00000577300 DUSP3P51452 185 aaPredicted RBP2.45□□□□□ -2.02
SMCHD1-202ENST00000577300 CCL11P51671 97 aa2.45□□□□□ -2.02
SMCHD1-202ENST00000577300 CRISP1P54107 249 aa2.45□□□□□ -2.02
SMCHD1-202ENST00000577300 RAB5BP61020 215 aa2.45□□□□□ -2.02
SMCHD1-202ENST00000577300 PPP3R1P63098 170 aa2.45□□□□□ -2.02
SMCHD1-202ENST00000577300 CAV1Q03135 178 aa2.45□□□□□ -2.02
SMCHD1-202ENST00000577300 ZNF77Q15935 545 aa2.45□□□□□ -2.02
SMCHD1-202ENST00000577300 POU2AF1Q16633 256 aa2.45□□□□□ -2.02
SMCHD1-202ENST00000577300 LY6G6FQ5SQ64 297 aa2.45□□□□□ -2.02
SMCHD1-202ENST00000577300 TPRG1LQ5T0D9 272 aa2.45□□□□□ -2.02
SMCHD1-202ENST00000577300 HENMT1Q5T8I9 393 aaKnown RBP2.45□□□□□ -2.02
SMCHD1-202ENST00000577300 PNCKQ6P2M8 343 aa2.45□□□□□ -2.02
SMCHD1-202ENST00000577300 TEX261Q6UWH6 196 aa2.45□□□□□ -2.02
SMCHD1-202ENST00000577300 HACD2Q6Y1H2 254 aa2.45□□□□□ -2.02
SMCHD1-202ENST00000577300 C19orf35Q6ZS72 473 aa2.45□□□□□ -2.02
SMCHD1-202ENST00000577300 SAXO1Q8IYX7 474 aa2.45□□□□□ -2.02
SMCHD1-202ENST00000577300 TCTE3Q8IZS6 198 aa2.45□□□□□ -2.02
SMCHD1-202ENST00000577300 METTL13Q8N6R0 699 aa2.45□□□□□ -2.02
SMCHD1-202ENST00000577300 MDS2Q8NDY4 140 aa2.45□□□□□ -2.02
SMCHD1-202ENST00000577300 ZNF738Q8NE65 137 aa2.45□□□□□ -2.02
SMCHD1-202ENST00000577300 LFNGQ8NES3 379 aa2.45□□□□□ -2.02
SMCHD1-202ENST00000577300 ATP6V1C2Q8NEY4 427 aa2.45□□□□□ -2.02
SMCHD1-202ENST00000577300 OR1L6Q8NGR2 347 aa2.45□□□□□ -2.02
SMCHD1-202ENST00000577300 OR6N1Q8NGY5 312 aa2.45□□□□□ -2.02
SMCHD1-202ENST00000577300 OR1P1Q8NH06 330 aa2.45□□□□□ -2.02
SMCHD1-202ENST00000577300 OR2AE1Q8NHA4 323 aa2.45□□□□□ -2.02
SMCHD1-202ENST00000577300 ORAOV1Q8WV07 137 aa2.45□□□□□ -2.02
SMCHD1-202ENST00000577300 C1orf54Q8WWF1 131 aa2.45□□□□□ -2.02
SMCHD1-202ENST00000577300 S100ZQ8WXG8 99 aa2.45□□□□□ -2.02
SMCHD1-202ENST00000577300 MYLPFQ96A32 169 aa2.45□□□□□ -2.02
SMCHD1-202ENST00000577300 PINX1Q96BK5 328 aaKnown RBP2.45□□□□□ -2.02
SMCHD1-202ENST00000577300 FLYWCH2Q96CP2 140 aaKnown RBP2.45□□□□□ -2.02
SMCHD1-202ENST00000577300 CXorf40BQ96DE9 158 aa2.45□□□□□ -2.02
SMCHD1-202ENST00000577300 TGM7Q96PF1 710 aa2.45□□□□□ -2.02
SMCHD1-202ENST00000577300 C20orf85Q9H1P6 137 aa2.45□□□□□ -2.02
SMCHD1-202ENST00000577300 PRO1933Q9H354 126 aa2.45□□□□□ -2.02
SMCHD1-202ENST00000577300 PPDPFQ9H3Y8 114 aa2.45□□□□□ -2.02
SMCHD1-202ENST00000577300 DSN1Q9H410 356 aa2.45□□□□□ -2.02
SMCHD1-202ENST00000577300 RNF122Q9H9V4 155 aa2.45□□□□□ -2.02
SMCHD1-202ENST00000577300 LRTM1Q9HBL6 345 aa2.45□□□□□ -2.02
SMCHD1-202ENST00000577300 POLD4Q9HCU8 107 aa2.45□□□□□ -2.02
SMCHD1-202ENST00000577300 MED11Q9P086 117 aa2.45□□□□□ -2.02
SMCHD1-202ENST00000577300 KIF25Q9UIL4 384 aa2.45□□□□□ -2.02
SMCHD1-202ENST00000577300 FBXO5Q9UKT4 447 aa2.45□□□□□ -2.02
SMCHD1-202ENST00000577300 HHLA2Q9UM44 414 aa2.45□□□□□ -2.02
SMCHD1-202ENST00000577300 UBQLN1Q9UMX0 589 aaKnown RBP2.45□□□□□ -2.02
SMCHD1-202ENST00000577300 TFR2Q9UP52 801 aa2.45□□□□□ -2.02
SMCHD1-202ENST00000577300 SLC35A3Q9Y2D2 325 aa2.45□□□□□ -2.02
SMCHD1-202ENST00000577300 MEMO1Q9Y316 297 aa2.45□□□□□ -2.02
SMCHD1-202ENST00000577300 SBDSQ9Y3A5 250 aaKnown RBP eCLIP2.45□□□□□ -2.02
SMCHD1-202ENST00000577300 MTCH2Q9Y6C9 303 aa2.45□□□□□ -2.02
SMCHD1-202ENST00000577300 U3KQ87 197 aa2.45□□□□□ -2.02
SMCHD1-202ENST00000577300 CCDC141Q6ZP82 1450 aa2.45□□□□□ -2.02
SMCHD1-202ENST00000577300 TEX14Q8IWB6 1497 aa2.45□□□□□ -2.02
SMCHD1-202ENST00000577300 NRXN1Q9ULB1 1477 aa2.45□□□□□ -2.02
SMCHD1-202ENST00000577300 PIK3C2GO75747 1445 aa2.44□□□□□ -2.02
SMCHD1-202ENST00000577300 MEIKINA0A087WXM9 373 aa2.44□□□□□ -2.02
SMCHD1-202ENST00000577300 A0A1W2PPV9 198 aa2.44□□□□□ -2.02
SMCHD1-202ENST00000577300 C20orf202A1L168 122 aa2.44□□□□□ -2.02
SMCHD1-202ENST00000577300 OR6C6A6NF89 314 aa2.44□□□□□ -2.02
SMCHD1-202ENST00000577300 SEC14L6B5MCN3 397 aa2.44□□□□□ -2.02
SMCHD1-202ENST00000577300 ZNF878C9JN71 531 aa2.44□□□□□ -2.02
SMCHD1-202ENST00000577300 H3BMQ9 156 aa2.44□□□□□ -2.02
SMCHD1-202ENST00000577300 TRAPPC2LH3BP13 241 aa2.44□□□□□ -2.02
SMCHD1-202ENST00000577300 J3QLI3 93 aa2.44□□□□□ -2.02
SMCHD1-202ENST00000577300 K7ENP7 123 aa2.44□□□□□ -2.02
SMCHD1-202ENST00000577300 M0R3G1 203 aa2.44□□□□□ -2.02
SMCHD1-202ENST00000577300 GPR31O00270 319 aa2.44□□□□□ -2.02
SMCHD1-202ENST00000577300 MSH4O15457 936 aa2.44□□□□□ -2.02
SMCHD1-202ENST00000577300 CHST1O43916 411 aa2.44□□□□□ -2.02
SMCHD1-202ENST00000577300 MFSD11O43934 449 aa2.44□□□□□ -2.02
SMCHD1-202ENST00000577300 RAMP1O60894 148 aa2.44□□□□□ -2.02
SMCHD1-202ENST00000577300 TNFSF15O95150 251 aa2.44□□□□□ -2.02
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms