RNA–Protein interactions for RNA: ENST00000573827.1

SMG6-214, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 3

Gene SMG6, Length 601 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-214ENST00000573827 ERVK13-1Q9NX77 482 aa14.13□□□□□ -0.15
SMG6-214ENST00000573827 HHLA2Q9UM44 414 aa14.13□□□□□ -0.15
SMG6-214ENST00000573827 KIAA2026Q5HYC2 2103 aa14.12□□□□□ -0.15
SMG6-214ENST00000573827 ZFPL1O95159 310 aa14.12□□□□□ -0.15
SMG6-214ENST00000573827 RBP4P02753 201 aa14.12□□□□□ -0.15
SMG6-214ENST00000573827 LIMS3P0CW19 117 aa14.12□□□□□ -0.15
SMG6-214ENST00000573827 LIMS4P0CW20 117 aa14.12□□□□□ -0.15
SMG6-214ENST00000573827 ZNF728P0DKX0 622 aa14.12□□□□□ -0.15
SMG6-214ENST00000573827 PRKACBP22694 351 aa14.12□□□□□ -0.15
SMG6-214ENST00000573827 COX7A1P24310 79 aa14.12□□□□□ -0.15
SMG6-214ENST00000573827 TGFBR2P37173 567 aa14.12□□□□□ -0.15
SMG6-214ENST00000573827 ATP1B3P54709 279 aa14.12□□□□□ -0.15
SMG6-214ENST00000573827 MTCP1P56278 107 aa14.12□□□□□ -0.15
SMG6-214ENST00000573827 ACTA2P62736 377 aa14.12□□□□□ -0.15
SMG6-214ENST00000573827 ACTG2P63267 376 aa14.12□□□□□ -0.15
SMG6-214ENST00000573827 DHRS7BQ6IAN0 325 aaPredicted RBP14.12□□□□□ -0.15
SMG6-214ENST00000573827 LHFPL4Q7Z7J7 247 aa14.12□□□□□ -0.15
SMG6-214ENST00000573827 Q8IYB0 196 aa14.12□□□□□ -0.15
SMG6-214ENST00000573827 C10orf67Q8IYJ2 551 aa14.12□□□□□ -0.15
SMG6-214ENST00000573827 FAM58AQ8N1B3 248 aa14.12□□□□□ -0.15
SMG6-214ENST00000573827 OR52I1Q8NGK6 324 aa14.12□□□□□ -0.15
SMG6-214ENST00000573827 EMG1Q92979 244 aaKnown RBP14.12□□□□□ -0.15
SMG6-214ENST00000573827 OPALINQ96PE5 141 aa14.12□□□□□ -0.15
SMG6-214ENST00000573827 SSX3Q99909 188 aa14.12□□□□□ -0.15
SMG6-214ENST00000573827 A0A1W2PPH5 198 aa14.11□□□□□ -0.15
SMG6-214ENST00000573827 SNTNA6NMZ2 147 aa14.11□□□□□ -0.15
SMG6-214ENST00000573827 VGLL3A8MV65 326 aa14.11□□□□□ -0.15
SMG6-214ENST00000573827 EBAG9O00559 213 aa14.11□□□□□ -0.15
SMG6-214ENST00000573827 MPZL2O60487 215 aa14.11□□□□□ -0.15
SMG6-214ENST00000573827 KDM4BO94953 1096 aa14.11□□□□□ -0.15
SMG6-214ENST00000573827 DUSP1P28562 367 aa14.11□□□□□ -0.15
SMG6-214ENST00000573827 OR3A1P47881 315 aa14.11□□□□□ -0.15
SMG6-214ENST00000573827 POU3F4P49335 361 aa14.11□□□□□ -0.15
SMG6-214ENST00000573827 MEF2CQ06413 473 aaPredicted RBP14.11□□□□□ -0.15
SMG6-214ENST00000573827 RAB40BQ12829 278 aa14.11□□□□□ -0.15
SMG6-214ENST00000573827 LRRC75BQ2VPJ9 315 aa14.11□□□□□ -0.15
SMG6-214ENST00000573827 SLC35E4Q6ICL7 350 aa14.11□□□□□ -0.15
SMG6-214ENST00000573827 ZNF529Q6P280 563 aa14.11□□□□□ -0.15
SMG6-214ENST00000573827 LHFPL2Q6ZUX7 228 aa14.11□□□□□ -0.15
SMG6-214ENST00000573827 OR4S1Q8NGB4 309 aa14.11□□□□□ -0.15
SMG6-214ENST00000573827 OR11H6Q8NGC7 330 aa14.11□□□□□ -0.15
SMG6-214ENST00000573827 RGP1Q92546 391 aaPredicted RBP14.11□□□□□ -0.15
SMG6-214ENST00000573827 SPACA5Q96QH8 159 aa14.11□□□□□ -0.15
SMG6-214ENST00000573827 JAM3Q9BX67 310 aa14.11□□□□□ -0.15
SMG6-214ENST00000573827 HMG20AQ9NP66 347 aa14.11□□□□□ -0.15
SMG6-214ENST00000573827 INPP5EQ9NRR6 644 aa14.11□□□□□ -0.15
SMG6-214ENST00000573827 BTBD17A6NE02 478 aa14.1□□□□□ -0.15
SMG6-214ENST00000573827 KCNAB3O43448 404 aa14.1□□□□□ -0.15
SMG6-214ENST00000573827 CHST1O43916 411 aa14.1□□□□□ -0.15
SMG6-214ENST00000573827 ALX3O95076 343 aa14.1□□□□□ -0.15
SMG6-214ENST00000573827 FADS2O95864 444 aaKnown RBP14.1□□□□□ -0.15
SMG6-214ENST00000573827 IGHV1-8P0DP01 117 aa14.1□□□□□ -0.15
SMG6-214ENST00000573827 CALCBP10092 127 aa14.1□□□□□ -0.15
SMG6-214ENST00000573827 ZNF20P17024 532 aa14.1□□□□□ -0.15
SMG6-214ENST00000573827 ZP1P60852 638 aa14.1□□□□□ -0.15
SMG6-214ENST00000573827 SMN1Q16637 294 aaKnown RBP14.1□□□□□ -0.15
SMG6-214ENST00000573827 ZNF626Q68DY1 528 aa14.1□□□□□ -0.15
SMG6-214ENST00000573827 BRICD5Q6PL45 260 aa14.1□□□□□ -0.15
SMG6-214ENST00000573827 PARP16Q8N5Y8 322 aa14.1□□□□□ -0.15
SMG6-214ENST00000573827 TPRX1Q8N7U7 411 aa14.1□□□□□ -0.15
SMG6-214ENST00000573827 OR13C9Q8NGT0 318 aa14.1□□□□□ -0.15
SMG6-214ENST00000573827 RPS4Y2Q8TD47 263 aa14.1□□□□□ -0.15
SMG6-214ENST00000573827 RFT1Q96AA3 541 aa14.1□□□□□ -0.15
SMG6-214ENST00000573827 Q96MT0 163 aa14.1□□□□□ -0.15
SMG6-214ENST00000573827 PDCD1LG2Q9BQ51 273 aa14.1□□□□□ -0.15
SMG6-214ENST00000573827 CHST6Q9GZX3 395 aa14.1□□□□□ -0.15
SMG6-214ENST00000573827 COMMD4Q9H0A8 199 aa14.1□□□□□ -0.15
SMG6-214ENST00000573827 PPA2Q9H2U2 334 aa14.1□□□□□ -0.15
SMG6-214ENST00000573827 FBLN5Q9UBX5 448 aa14.1□□□□□ -0.15
SMG6-214ENST00000573827 LMO1P25800 156 aa14.09□□□□□ -0.15
SMG6-214ENST00000573827 EDDM3BP56851 147 aa14.09□□□□□ -0.15
SMG6-214ENST00000573827 LY6EQ16553 131 aa14.09□□□□□ -0.15
SMG6-214ENST00000573827 SPIN3Q5JUX0 258 aa14.09□□□□□ -0.15
SMG6-214ENST00000573827 Q6P435 159 aa14.09□□□□□ -0.15
SMG6-214ENST00000573827 GDPD3Q7L5L3 318 aa14.09□□□□□ -0.15
SMG6-214ENST00000573827 OR13C3Q8NGS6 347 aa14.09□□□□□ -0.15
SMG6-214ENST00000573827 ZCCHC4Q9H5U6 513 aa14.09□□□□□ -0.15
SMG6-214ENST00000573827 FGF20Q9NP95 211 aaPredicted RBP14.09□□□□□ -0.15
SMG6-214ENST00000573827 SIGLEC9Q9Y336 463 aa14.09□□□□□ -0.15
SMG6-214ENST00000573827 LINC00312Q9Y6C7 94 aa14.09□□□□□ -0.15
SMG6-214ENST00000573827 hCG_1809904A0A1W2PP81 198 aa14.08□□□□□ -0.16
SMG6-214ENST00000573827 A0A1W2PPE2 198 aa14.08□□□□□ -0.16
SMG6-214ENST00000573827 A0A1W2PR64 198 aa14.08□□□□□ -0.16
SMG6-214ENST00000573827 A0A1W2PRV1 198 aa14.08□□□□□ -0.16
SMG6-214ENST00000573827 MMP23AO75900 390 aa14.08□□□□□ -0.16
SMG6-214ENST00000573827 PRKACAP17612 351 aa14.08□□□□□ -0.16
SMG6-214ENST00000573827 ERP29P30040 261 aaKnown RBP14.08□□□□□ -0.16
SMG6-214ENST00000573827 EFNB2P52799 333 aa14.08□□□□□ -0.16
SMG6-214ENST00000573827 P2RX3P56373 397 aa14.08□□□□□ -0.16
SMG6-214ENST00000573827 EDDM3AQ14507 147 aa14.08□□□□□ -0.16
SMG6-214ENST00000573827 GRK1Q15835 563 aa14.08□□□□□ -0.16
SMG6-214ENST00000573827 LPCAT4Q643R3 524 aa14.08□□□□□ -0.16
SMG6-214ENST00000573827 XAF1Q6GPH4 301 aa14.08□□□□□ -0.16
SMG6-214ENST00000573827 CCBE1Q6UXH8 406 aaPredicted RBP14.08□□□□□ -0.16
SMG6-214ENST00000573827 SAXO1Q8IYX7 474 aa14.08□□□□□ -0.16
SMG6-214ENST00000573827 ZNF676Q8N7Q3 588 aa14.08□□□□□ -0.16
SMG6-214ENST00000573827 OR5D18Q8NGL1 313 aa14.08□□□□□ -0.16
SMG6-214ENST00000573827 ZNF714Q96N38 554 aa14.08□□□□□ -0.16
SMG6-214ENST00000573827 RDH12Q96NR8 316 aa14.08□□□□□ -0.16
SMG6-214ENST00000573827 SMPD3Q9NY59 655 aaPredicted RBP14.08□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms