RNA–Protein interactions for RNA: ENST00000573577.5

RPAIN-213, Transcript of RPA interacting protein, humanhuman

TSL 2

Gene RPAIN, Length 1,282 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-213ENST00000573577 FOXRED1Q96CU9 486 aaPredicted RBP11.24□□□□□ -0.61
RPAIN-213ENST00000573577 SDSLQ96GA7 329 aa11.24□□□□□ -0.61
RPAIN-213ENST00000573577 GAFA1Q96PS6 74 aa11.24□□□□□ -0.61
RPAIN-213ENST00000573577 NR1H4Q96RI1 486 aaPredicted RBP11.24□□□□□ -0.61
RPAIN-213ENST00000573577 C7orf69Q9H7B7 122 aa11.24□□□□□ -0.61
RPAIN-213ENST00000573577 ELL3Q9HB65 397 aaPredicted RBP11.24□□□□□ -0.61
RPAIN-213ENST00000573577 MMP26Q9NRE1 261 aa11.24□□□□□ -0.61
RPAIN-213ENST00000573577 RBFOX1Q9NWB1 397 aaKnown RBP11.24□□□□□ -0.61
RPAIN-213ENST00000573577 OR14J1Q9UGF5 321 aa11.24□□□□□ -0.61
RPAIN-213ENST00000573577 ZNF222Q9UK12 451 aa11.24□□□□□ -0.61
RPAIN-213ENST00000573577 SF3B6Q9Y3B4 125 aaKnown RBP11.24□□□□□ -0.61
RPAIN-213ENST00000573577 ENSAO43768 121 aaKnown RBP11.23□□□□□ -0.61
RPAIN-213ENST00000573577 ZNF780AO75290 641 aaPredicted RBP11.23□□□□□ -0.61
RPAIN-213ENST00000573577 CHRM2P08172 466 aa11.23□□□□□ -0.61
RPAIN-213ENST00000573577 PRKACAP17612 351 aa11.23□□□□□ -0.61
RPAIN-213ENST00000573577 RANBP1P43487 201 aa11.23□□□□□ -0.61
RPAIN-213ENST00000573577 NPBWR2P48146 333 aa11.23□□□□□ -0.61
RPAIN-213ENST00000573577 MTNR1BP49286 362 aa11.23□□□□□ -0.61
RPAIN-213ENST00000573577 CAPZA1P52907 286 aa11.23□□□□□ -0.61
RPAIN-213ENST00000573577 FABP5Q01469 135 aa11.23□□□□□ -0.61
RPAIN-213ENST00000573577 IKZF1Q13422 519 aa11.23□□□□□ -0.61
RPAIN-213ENST00000573577 GPR176Q14439 515 aa11.23□□□□□ -0.61
RPAIN-213ENST00000573577 NEDD8Q15843 81 aa11.23□□□□□ -0.61
RPAIN-213ENST00000573577 TUSC1Q2TAM9 212 aa11.23□□□□□ -0.61
RPAIN-213ENST00000573577 SYT6Q5T7P8 510 aaPredicted RBP11.23□□□□□ -0.61
RPAIN-213ENST00000573577 GLT8D1Q68CQ7 371 aa11.23□□□□□ -0.61
RPAIN-213ENST00000573577 CRIP3Q6Q6R5 217 aa11.23□□□□□ -0.61
RPAIN-213ENST00000573577 TMEM91Q6ZNR0 172 aa11.23□□□□□ -0.61
RPAIN-213ENST00000573577 C1QL2Q7Z5L3 287 aa11.23□□□□□ -0.61
RPAIN-213ENST00000573577 RAB40AQ8WXH6 277 aa11.23□□□□□ -0.61
RPAIN-213ENST00000573577 MDFIQ99750 246 aa11.23□□□□□ -0.61
RPAIN-213ENST00000573577 UQCC2Q9BRT2 126 aa11.23□□□□□ -0.61
RPAIN-213ENST00000573577 METTL9Q9H1A3 318 aa11.23□□□□□ -0.61
RPAIN-213ENST00000573577 SEBOXQ9HB31 216 aaPredicted RBP11.23□□□□□ -0.61
RPAIN-213ENST00000573577 HMG20AQ9NP66 347 aa11.23□□□□□ -0.61
RPAIN-213ENST00000573577 SLC25A10Q9UBX3 287 aaPredicted RBP11.23□□□□□ -0.61
RPAIN-213ENST00000573577 OPN4Q9UHM6 478 aa11.23□□□□□ -0.61
RPAIN-213ENST00000573577 FBN1P35555 2871 aaKnown RBP11.23□□□□□ -0.61
RPAIN-213ENST00000573577 IGHV2-70DA0A0C4DH43 119 aa11.22□□□□□ -0.61
RPAIN-213ENST00000573577 IGKV1-12A0A0C4DH73 117 aa11.22□□□□□ -0.61
RPAIN-213ENST00000573577 TRDV1A0A1B0GX56 115 aa11.22□□□□□ -0.61
RPAIN-213ENST00000573577 MAGEA13PA6NCF6 341 aa11.22□□□□□ -0.61
RPAIN-213ENST00000573577 F8VVB4 439 aa11.22□□□□□ -0.61
RPAIN-213ENST00000573577 F8VWA3 439 aa11.22□□□□□ -0.61
RPAIN-213ENST00000573577 SH2D1BO14796 132 aa11.22□□□□□ -0.61
RPAIN-213ENST00000573577 IGKV1D-12P01611 117 aa11.22□□□□□ -0.61
RPAIN-213ENST00000573577 CSTBP04080 98 aaKnown RBP11.22□□□□□ -0.61
RPAIN-213ENST00000573577 LIPFP07098 398 aa11.22□□□□□ -0.61
RPAIN-213ENST00000573577 SFTPBP07988 381 aa11.22□□□□□ -0.61
RPAIN-213ENST00000573577 AMY2BP19961 511 aa11.22□□□□□ -0.61
RPAIN-213ENST00000573577 OR3A4PP47883 348 aa11.22□□□□□ -0.61
RPAIN-213ENST00000573577 CAV3P56539 151 aa11.22□□□□□ -0.61
RPAIN-213ENST00000573577 PAX2Q02962 417 aa11.22□□□□□ -0.61
RPAIN-213ENST00000573577 SCGB2A2Q13296 93 aa11.22□□□□□ -0.61
RPAIN-213ENST00000573577 ZNF146Q15072 292 aa11.22□□□□□ -0.61
RPAIN-213ENST00000573577 FAM27D1Q5T7N8 215 aa11.22□□□□□ -0.61
RPAIN-213ENST00000573577 ELP2Q6IA86 826 aa11.22□□□□□ -0.61
RPAIN-213ENST00000573577 CD200R1LQ6Q8B3 271 aa11.22□□□□□ -0.61
RPAIN-213ENST00000573577 ASCL4Q6XD76 172 aa11.22□□□□□ -0.61
RPAIN-213ENST00000573577 RNF144BQ7Z419 303 aa11.22□□□□□ -0.61
RPAIN-213ENST00000573577 CD177Q8N6Q3 437 aa11.22□□□□□ -0.61
RPAIN-213ENST00000573577 TMEM185AQ8NFB2 350 aa11.22□□□□□ -0.61
RPAIN-213ENST00000573577 NUDT16L1Q9BRJ7 211 aaKnown RBP11.22□□□□□ -0.61
RPAIN-213ENST00000573577 MRI1Q9BV20 369 aa11.22□□□□□ -0.61
RPAIN-213ENST00000573577 FAM234AQ9H0X4 552 aa11.22□□□□□ -0.61
RPAIN-213ENST00000573577 IL36GQ9NZH8 169 aa11.22□□□□□ -0.61
RPAIN-213ENST00000573577 ING4Q9UNL4 249 aa11.22□□□□□ -0.61
RPAIN-213ENST00000573577 MAB21L2Q9Y586 359 aa11.22□□□□□ -0.61
RPAIN-213ENST00000573577 INSIG2Q9Y5U4 225 aa11.22□□□□□ -0.61
RPAIN-213ENST00000573577 A0A1B0GW55 424 aa11.21□□□□□ -0.61
RPAIN-213ENST00000573577 HAND1O96004 215 aa11.21□□□□□ -0.61
RPAIN-213ENST00000573577 DUX4L2P0CJ85 424 aa11.21□□□□□ -0.61
RPAIN-213ENST00000573577 DUX4L3P0CJ86 424 aa11.21□□□□□ -0.61
RPAIN-213ENST00000573577 DUX4L4P0CJ87 422 aa11.21□□□□□ -0.61
RPAIN-213ENST00000573577 DUX4L5P0CJ88 424 aa11.21□□□□□ -0.61
RPAIN-213ENST00000573577 DUX4L6P0CJ89 424 aa11.21□□□□□ -0.61
RPAIN-213ENST00000573577 DUX4L7P0CJ90 424 aa11.21□□□□□ -0.61
RPAIN-213ENST00000573577 NDUFB7P17568 137 aa11.21□□□□□ -0.61
RPAIN-213ENST00000573577 ADRA2CP18825 462 aa11.21□□□□□ -0.61
RPAIN-213ENST00000573577 CALRP27797 417 aaKnown RBP11.21□□□□□ -0.61
RPAIN-213ENST00000573577 PSMD7P51665 324 aa11.21□□□□□ -0.61
RPAIN-213ENST00000573577 FGF12P61328 243 aa11.21□□□□□ -0.61
RPAIN-213ENST00000573577 DGUOKQ16854 277 aa11.21□□□□□ -0.61
RPAIN-213ENST00000573577 AWAT2Q6E213 333 aa11.21□□□□□ -0.61
RPAIN-213ENST00000573577 DUX4L9Q6RFH8 374 aaPredicted RBP11.21□□□□□ -0.61
RPAIN-213ENST00000573577 BTN2A1Q7KYR7 527 aa11.21□□□□□ -0.61
RPAIN-213ENST00000573577 ASCC1Q8N9N2 400 aaKnown RBP11.21□□□□□ -0.61
RPAIN-213ENST00000573577 ZNRF1Q8ND25 227 aa11.21□□□□□ -0.61
RPAIN-213ENST00000573577 OR5D13Q8NGL4 314 aa11.21□□□□□ -0.61
RPAIN-213ENST00000573577 PPP1R35Q8TAP8 253 aa11.21□□□□□ -0.61
RPAIN-213ENST00000573577 NANPQ8TBE9 248 aa11.21□□□□□ -0.61
RPAIN-213ENST00000573577 MUL1Q969V5 352 aa11.21□□□□□ -0.61
RPAIN-213ENST00000573577 DACT3Q96B18 629 aaPredicted RBP11.21□□□□□ -0.61
RPAIN-213ENST00000573577 DMRTB1Q96MA1 342 aa11.21□□□□□ -0.61
RPAIN-213ENST00000573577 CNTD2Q9H8S5 307 aa11.21□□□□□ -0.61
RPAIN-213ENST00000573577 EXOSC4Q9NPD3 245 aaKnown RBP11.21□□□□□ -0.61
RPAIN-213ENST00000573577 GHRLQ9UBU3 117 aa11.21□□□□□ -0.61
RPAIN-213ENST00000573577 DUX4Q9UBX2 424 aa11.21□□□□□ -0.61
RPAIN-213ENST00000573577 STUB1Q9UNE7 303 aa11.21□□□□□ -0.61
RPAIN-213ENST00000573577 GSTK1Q9Y2Q3 226 aa11.21□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 156 ms