RNA–Protein interactions for RNA: ENST00000572778.5

CHMP6-204, Transcript of charged multivesicular body protein 6, humanhuman

TSL 2

Gene CHMP6, Length 737 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP6-204ENST00000572778 DOCK11Q5JSL3 2073 aa17■□□□□ 0.31
CHMP6-204ENST00000572778 IGHV1-69DA0A0B4J2H0 117 aa16.99■□□□□ 0.31
CHMP6-204ENST00000572778 MDFIC2A0A1B0GVS7 189 aa16.99■□□□□ 0.31
CHMP6-204ENST00000572778 K7N7A8 449 aa16.99■□□□□ 0.31
CHMP6-204ENST00000572778 M0R1W7 72 aa16.99■□□□□ 0.31
CHMP6-204ENST00000572778 HAND1O96004 215 aa16.99■□□□□ 0.31
CHMP6-204ENST00000572778 IGHV1-69P01742 117 aa16.99■□□□□ 0.31
CHMP6-204ENST00000572778 HSPA13P48723 471 aa16.99■□□□□ 0.31
CHMP6-204ENST00000572778 RPL31P62899 125 aaKnown RBP16.99■□□□□ 0.31
CHMP6-204ENST00000572778 DEFB112Q30KQ8 113 aa16.99■□□□□ 0.31
CHMP6-204ENST00000572778 CRIP3Q6Q6R5 217 aa16.99■□□□□ 0.31
CHMP6-204ENST00000572778 ZDHHC16Q969W1 377 aa16.99■□□□□ 0.31
CHMP6-204ENST00000572778 CPNE2Q96FN4 548 aaPredicted RBP16.99■□□□□ 0.31
CHMP6-204ENST00000572778 ANKRD60Q9BZ19 345 aa16.99■□□□□ 0.31
CHMP6-204ENST00000572778 HMG20AQ9NP66 347 aa16.99■□□□□ 0.31
CHMP6-204ENST00000572778 GLS2Q9UI32 602 aa16.99■□□□□ 0.31
CHMP6-204ENST00000572778 GSTK1Q9Y2Q3 226 aa16.99■□□□□ 0.31
CHMP6-204ENST00000572778 COL6A5A8TX70 2615 aa16.99■□□□□ 0.31
CHMP6-204ENST00000572778 KDM4BO94953 1096 aa16.98■□□□□ 0.31
CHMP6-204ENST00000572778 CELP19835 753 aa16.98■□□□□ 0.31
CHMP6-204ENST00000572778 DLX1P56177 255 aa16.98■□□□□ 0.31
CHMP6-204ENST00000572778 UBA52P62987 128 aaKnown RBP16.98■□□□□ 0.31
CHMP6-204ENST00000572778 PPP3R1P63098 170 aa16.98■□□□□ 0.31
CHMP6-204ENST00000572778 RIPK1Q13546 671 aa16.98■□□□□ 0.31
CHMP6-204ENST00000572778 YIF1BQ5BJH7 314 aa16.98■□□□□ 0.31
CHMP6-204ENST00000572778 TMEM200BQ69YZ2 307 aa16.98■□□□□ 0.31
CHMP6-204ENST00000572778 ASPHD2Q6ICH7 369 aa16.98■□□□□ 0.31
CHMP6-204ENST00000572778 ZNF529Q6P280 563 aa16.98■□□□□ 0.31
CHMP6-204ENST00000572778 SAXO1Q8IYX7 474 aa16.98■□□□□ 0.31
CHMP6-204ENST00000572778 ORAI1Q96D31 301 aa16.98■□□□□ 0.31
CHMP6-204ENST00000572778 PGLYRP3Q96LB9 341 aa16.98■□□□□ 0.31
CHMP6-204ENST00000572778 TPRKBQ9Y3C4 175 aa16.98■□□□□ 0.31
CHMP6-204ENST00000572778 A0A1W2PPH5 198 aa16.97■□□□□ 0.31
CHMP6-204ENST00000572778 DNAJC9-AS1A6NH13 148 aa16.97■□□□□ 0.31
CHMP6-204ENST00000572778 ZNF737O75373 536 aa16.97■□□□□ 0.31
CHMP6-204ENST00000572778 GABRR1P24046 479 aa16.97■□□□□ 0.31
CHMP6-204ENST00000572778 EDDM3BP56851 147 aa16.97■□□□□ 0.31
CHMP6-204ENST00000572778 ZP1P60852 638 aa16.97■□□□□ 0.31
CHMP6-204ENST00000572778 ACTG1P63261 375 aa16.97■□□□□ 0.31
CHMP6-204ENST00000572778 ZNF146Q15072 292 aa16.97■□□□□ 0.31
CHMP6-204ENST00000572778 Q499Y3 187 aa16.97■□□□□ 0.31
CHMP6-204ENST00000572778 C1orf122Q6ZSJ8 110 aa16.97■□□□□ 0.31
CHMP6-204ENST00000572778 GDPD3Q7L5L3 318 aa16.97■□□□□ 0.31
CHMP6-204ENST00000572778 ZSCAN4Q8NAM6 433 aaPredicted RBP16.97■□□□□ 0.31
CHMP6-204ENST00000572778 OR52N4Q8NGI2 321 aa16.97■□□□□ 0.31
CHMP6-204ENST00000572778 TBC1D15Q8TC07 691 aa16.97■□□□□ 0.31
CHMP6-204ENST00000572778 FAM216AQ8WUB2 273 aa16.97■□□□□ 0.31
CHMP6-204ENST00000572778 SGCDQ92629 289 aa16.97■□□□□ 0.31
CHMP6-204ENST00000572778 SNX22Q96L94 193 aa16.97■□□□□ 0.31
CHMP6-204ENST00000572778 MND1Q9BWT6 205 aa16.97■□□□□ 0.31
CHMP6-204ENST00000572778 METTL8Q9H825 291 aaKnown RBP16.97■□□□□ 0.31
CHMP6-204ENST00000572778 SEBOXQ9HB31 216 aaPredicted RBP16.97■□□□□ 0.31
CHMP6-204ENST00000572778 PAK1IP1Q9NWT1 392 aaPredicted RBP16.97■□□□□ 0.31
CHMP6-204ENST00000572778 PCDHGB5Q9Y5G0 923 aa16.97■□□□□ 0.31
CHMP6-204ENST00000572778 DNHD1Q96M86 4753 aa16.96■□□□□ 0.31
CHMP6-204ENST00000572778 TRBV5-5A0A0J9YX44 114 aa16.96■□□□□ 0.31
CHMP6-204ENST00000572778 A0A1W2PRD5 423 aa16.96■□□□□ 0.31
CHMP6-204ENST00000572778 A0A1W2PRF3 423 aa16.96■□□□□ 0.31
CHMP6-204ENST00000572778 A0A1W2PRM7 423 aa16.96■□□□□ 0.31
CHMP6-204ENST00000572778 TMEM82A0PJX8 343 aa16.96■□□□□ 0.31
CHMP6-204ENST00000572778 RNASEK-C17orf49H0YIS7 233 aa16.96■□□□□ 0.31
CHMP6-204ENST00000572778 PRTN3P24158 256 aa16.96■□□□□ 0.31
CHMP6-204ENST00000572778 RPS11P62280 158 aaKnown RBP eCLIP16.96■□□□□ 0.31
CHMP6-204ENST00000572778 KLRD1Q13241 179 aa16.96■□□□□ 0.31
CHMP6-204ENST00000572778 SPIN3Q5JUX0 258 aa16.96■□□□□ 0.31
CHMP6-204ENST00000572778 RNLSQ5VYX0 342 aa16.96■□□□□ 0.31
CHMP6-204ENST00000572778 C17orf107Q6ZR85 190 aa16.96■□□□□ 0.31
CHMP6-204ENST00000572778 OR5D13Q8NGL4 314 aa16.96■□□□□ 0.31
CHMP6-204ENST00000572778 TNFAIP8L1Q8WVP5 186 aa16.96■□□□□ 0.31
CHMP6-204ENST00000572778 CNBD2Q96M20 576 aa16.96■□□□□ 0.31
CHMP6-204ENST00000572778 NKX3-1Q99801 234 aaPredicted RBP16.96■□□□□ 0.31
CHMP6-204ENST00000572778 CDCA4Q9BXL8 241 aa16.96■□□□□ 0.31
CHMP6-204ENST00000572778 FAM192AQ9GZU8 254 aa16.96■□□□□ 0.31
CHMP6-204ENST00000572778 RHOFQ9HBH0 211 aa16.96■□□□□ 0.31
CHMP6-204ENST00000572778 EXOSC4Q9NPD3 245 aaKnown RBP16.96■□□□□ 0.31
CHMP6-204ENST00000572778 A0A1W2PPK0 400 aa16.95■□□□□ 0.3
CHMP6-204ENST00000572778 SIRPB1O00241 398 aa16.95■□□□□ 0.3
CHMP6-204ENST00000572778 GABRPO00591 440 aa16.95■□□□□ 0.3
CHMP6-204ENST00000572778 SH2D1BO14796 132 aa16.95■□□□□ 0.3
CHMP6-204ENST00000572778 EEF1B2P24534 225 aaKnown RBP16.95■□□□□ 0.3
CHMP6-204ENST00000572778 SLC35A2P78381 396 aa16.95■□□□□ 0.3
CHMP6-204ENST00000572778 GUCA2AQ02747 115 aa16.95■□□□□ 0.3
CHMP6-204ENST00000572778 SCN1BQ07699 218 aa16.95■□□□□ 0.3
CHMP6-204ENST00000572778 DOC2BQ14184 412 aa16.95■□□□□ 0.3
CHMP6-204ENST00000572778 EDDM3AQ14507 147 aa16.95■□□□□ 0.3
CHMP6-204ENST00000572778 GRK1Q15835 563 aa16.95■□□□□ 0.3
CHMP6-204ENST00000572778 DDI2Q5TDH0 399 aa16.95■□□□□ 0.3
CHMP6-204ENST00000572778 METAP1DQ6UB28 335 aaPredicted RBP16.95■□□□□ 0.3
CHMP6-204ENST00000572778 OR8H2Q8N162 312 aa16.95■□□□□ 0.3
CHMP6-204ENST00000572778 C1orf147Q96MC9 270 aaPredicted RBP16.95■□□□□ 0.3
CHMP6-204ENST00000572778 OR14A2Q96R54 314 aa16.95■□□□□ 0.3
CHMP6-204ENST00000572778 CHST6Q9GZX3 395 aa16.95■□□□□ 0.3
CHMP6-204ENST00000572778 TMEM138Q9NPI0 162 aa16.95■□□□□ 0.3
CHMP6-204ENST00000572778 CKLFQ9UBR5 152 aa16.95■□□□□ 0.3
CHMP6-204ENST00000572778 A0A0U1RQK1 487 aa16.94■□□□□ 0.3
CHMP6-204ENST00000572778 MEX3AA1L020 520 aaKnown RBP16.94■□□□□ 0.3
CHMP6-204ENST00000572778 HOXA3O43365 443 aaPredicted RBP16.94■□□□□ 0.3
CHMP6-204ENST00000572778 ALDOBP05062 364 aa16.94■□□□□ 0.3
CHMP6-204ENST00000572778 CCL3L1P16619 93 aa16.94■□□□□ 0.3
CHMP6-204ENST00000572778 BDKRB2P30411 391 aa16.94■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms