RNA–Protein interactions for RNA: ENST00000570828.5

CTDNEP1-205, Transcript of CTD nuclear envelope phosphatase 1, humanhuman

TSL 3

Gene CTDNEP1, Length 986 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1-205ENST00000570828 TRBV2A0A0J9YWF9 115 aa10.05□□□□□ -0.8
CTDNEP1-205ENST00000570828 J3QLW9 94 aa10.05□□□□□ -0.8
CTDNEP1-205ENST00000570828 J3QRE1 110 aa10.05□□□□□ -0.8
CTDNEP1-205ENST00000570828 TSPAN9O75954 239 aa10.05□□□□□ -0.8
CTDNEP1-205ENST00000570828 HAND1O96004 215 aa10.05□□□□□ -0.8
CTDNEP1-205ENST00000570828 ISG15P05161 165 aa10.05□□□□□ -0.8
CTDNEP1-205ENST00000570828 ZNF728P0DKX0 622 aa10.05□□□□□ -0.8
CTDNEP1-205ENST00000570828 ZNF19P17023 458 aa10.05□□□□□ -0.8
CTDNEP1-205ENST00000570828 GABRR1P24046 479 aa10.05□□□□□ -0.8
CTDNEP1-205ENST00000570828 AZGP1P25311 298 aaKnown RBP10.05□□□□□ -0.8
CTDNEP1-205ENST00000570828 GABRA5P31644 462 aa10.05□□□□□ -0.8
CTDNEP1-205ENST00000570828 LY6EQ16553 131 aa10.05□□□□□ -0.8
CTDNEP1-205ENST00000570828 AANATQ16613 207 aa10.05□□□□□ -0.8
CTDNEP1-205ENST00000570828 FDX2Q6P4F2 183 aa10.05□□□□□ -0.8
CTDNEP1-205ENST00000570828 LHFPL2Q6ZUX7 228 aa10.05□□□□□ -0.8
CTDNEP1-205ENST00000570828 UTS2BQ765I0 119 aa10.05□□□□□ -0.8
CTDNEP1-205ENST00000570828 C11orf42Q8N5U0 333 aa10.05□□□□□ -0.8
CTDNEP1-205ENST00000570828 OR4C13Q8NGP0 309 aa10.05□□□□□ -0.8
CTDNEP1-205ENST00000570828 OR13C3Q8NGS6 347 aa10.05□□□□□ -0.8
CTDNEP1-205ENST00000570828 OR13D1Q8NGV5 346 aa10.05□□□□□ -0.8
CTDNEP1-205ENST00000570828 FGGYQ96C11 551 aa10.05□□□□□ -0.8
CTDNEP1-205ENST00000570828 C4orf36Q96KX1 117 aa10.05□□□□□ -0.8
CTDNEP1-205ENST00000570828 MBOAT4Q96T53 435 aa10.05□□□□□ -0.8
CTDNEP1-205ENST00000570828 ARPC5LQ9BPX5 153 aa10.05□□□□□ -0.8
CTDNEP1-205ENST00000570828 C9orf16Q9BUW7 83 aa10.05□□□□□ -0.8
CTDNEP1-205ENST00000570828 RBFOX1Q9NWB1 397 aaKnown RBP10.05□□□□□ -0.8
CTDNEP1-205ENST00000570828 FRRS1LQ9P0K9 344 aa10.05□□□□□ -0.8
CTDNEP1-205ENST00000570828 HHLA2Q9UM44 414 aa10.05□□□□□ -0.8
CTDNEP1-205ENST00000570828 VWFP04275 2813 aa10.04□□□□□ -0.8
CTDNEP1-205ENST00000570828 IGKV1-9A0A0C4DH69 117 aa10.04□□□□□ -0.8
CTDNEP1-205ENST00000570828 hADV38S2A0JD32 116 aa10.04□□□□□ -0.8
CTDNEP1-205ENST00000570828 MEX3AA1L020 520 aaKnown RBP10.04□□□□□ -0.8
CTDNEP1-205ENST00000570828 C17orf98A8MV24 154 aa10.04□□□□□ -0.8
CTDNEP1-205ENST00000570828 MPZL2O60487 215 aa10.04□□□□□ -0.8
CTDNEP1-205ENST00000570828 RBP4P02753 201 aa10.04□□□□□ -0.8
CTDNEP1-205ENST00000570828 ARG1P05089 322 aa10.04□□□□□ -0.8
CTDNEP1-205ENST00000570828 ATF1P18846 271 aa10.04□□□□□ -0.8
CTDNEP1-205ENST00000570828 BCL3P20749 454 aa10.04□□□□□ -0.8
CTDNEP1-205ENST00000570828 PEX2P28328 305 aa10.04□□□□□ -0.8
CTDNEP1-205ENST00000570828 CCR9P51686 369 aa10.04□□□□□ -0.8
CTDNEP1-205ENST00000570828 DLX6P56179 175 aa10.04□□□□□ -0.8
CTDNEP1-205ENST00000570828 NANOS3P60323 173 aaKnown RBP10.04□□□□□ -0.8
CTDNEP1-205ENST00000570828 KRTAP10-3P60369 221 aa10.04□□□□□ -0.8
CTDNEP1-205ENST00000570828 ZNF91Q05481 1191 aa10.04□□□□□ -0.8
CTDNEP1-205ENST00000570828 GRK1Q15835 563 aa10.04□□□□□ -0.8
CTDNEP1-205ENST00000570828 FAM58AQ8N1B3 248 aa10.04□□□□□ -0.8
CTDNEP1-205ENST00000570828 ZNF676Q8N7Q3 588 aa10.04□□□□□ -0.8
CTDNEP1-205ENST00000570828 FOXRED1Q96CU9 486 aaPredicted RBP10.04□□□□□ -0.8
CTDNEP1-205ENST00000570828 LGALS12Q96DT0 336 aa10.04□□□□□ -0.8
CTDNEP1-205ENST00000570828 PELI1Q96FA3 418 aa10.04□□□□□ -0.8
CTDNEP1-205ENST00000570828 AJUBAQ96IF1 538 aa10.04□□□□□ -0.8
CTDNEP1-205ENST00000570828 SNX22Q96L94 193 aa10.04□□□□□ -0.8
CTDNEP1-205ENST00000570828 Q96MT0 163 aa10.04□□□□□ -0.8
CTDNEP1-205ENST00000570828 ZNF714Q96N38 554 aa10.04□□□□□ -0.8
CTDNEP1-205ENST00000570828 OPALINQ96PE5 141 aa10.04□□□□□ -0.8
CTDNEP1-205ENST00000570828 ALG8Q9BVK2 526 aa10.04□□□□□ -0.8
CTDNEP1-205ENST00000570828 KRTAP9-9Q9BYP9 154 aa10.04□□□□□ -0.8
CTDNEP1-205ENST00000570828 KRTAP9-4Q9BYQ2 154 aa10.04□□□□□ -0.8
CTDNEP1-205ENST00000570828 MEGF9Q9H1U4 602 aa10.04□□□□□ -0.8
CTDNEP1-205ENST00000570828 MMP27Q9H306 513 aa10.04□□□□□ -0.8
CTDNEP1-205ENST00000570828 NEK6Q9HC98 313 aa10.04□□□□□ -0.8
CTDNEP1-205ENST00000570828 TPSG1Q9NRR2 321 aa10.04□□□□□ -0.8
CTDNEP1-205ENST00000570828 IL36RNQ9UBH0 155 aa10.04□□□□□ -0.8
CTDNEP1-205ENST00000570828 GLS2Q9UI32 602 aa10.04□□□□□ -0.8
CTDNEP1-205ENST00000570828 EXOGQ9Y2C4 368 aaKnown RBP10.04□□□□□ -0.8
CTDNEP1-205ENST00000570828 TMEM82A0PJX8 343 aa10.03□□□□□ -0.8
CTDNEP1-205ENST00000570828 E9PQ18 207 aa10.03□□□□□ -0.8
CTDNEP1-205ENST00000570828 FADS2O95864 444 aaKnown RBP10.03□□□□□ -0.8
CTDNEP1-205ENST00000570828 IGHV1-8P0DP01 117 aa10.03□□□□□ -0.8
CTDNEP1-205ENST00000570828 DBTP11182 482 aaKnown RBP10.03□□□□□ -0.8
CTDNEP1-205ENST00000570828 PRKACAP17612 351 aa10.03□□□□□ -0.8
CTDNEP1-205ENST00000570828 PAX6P26367 422 aa10.03□□□□□ -0.8
CTDNEP1-205ENST00000570828 NPBWR2P48146 333 aa10.03□□□□□ -0.8
CTDNEP1-205ENST00000570828 SNU13P55769 128 aaKnown RBP10.03□□□□□ -0.8
CTDNEP1-205ENST00000570828 MEF2CQ06413 473 aaPredicted RBP10.03□□□□□ -0.8
CTDNEP1-205ENST00000570828 ALKBH1Q13686 389 aaKnown RBP10.03□□□□□ -0.8
CTDNEP1-205ENST00000570828 SPIN3Q5JUX0 258 aa10.03□□□□□ -0.8
CTDNEP1-205ENST00000570828 SLC35E4Q6ICL7 350 aa10.03□□□□□ -0.8
CTDNEP1-205ENST00000570828 SYS1Q8N2H4 156 aa10.03□□□□□ -0.8
CTDNEP1-205ENST00000570828 OR51A4Q8NGJ6 313 aa10.03□□□□□ -0.8
CTDNEP1-205ENST00000570828 OR13C9Q8NGT0 318 aa10.03□□□□□ -0.8
CTDNEP1-205ENST00000570828 PPP1R35Q8TAP8 253 aa10.03□□□□□ -0.8
CTDNEP1-205ENST00000570828 RFT1Q96AA3 541 aa10.03□□□□□ -0.8
CTDNEP1-205ENST00000570828 NPFFR1Q9GZQ6 430 aa10.03□□□□□ -0.8
CTDNEP1-205ENST00000570828 CHST6Q9GZX3 395 aa10.03□□□□□ -0.8
CTDNEP1-205ENST00000570828 SEBOXQ9HB31 216 aaPredicted RBP10.03□□□□□ -0.8
CTDNEP1-205ENST00000570828 INPP5EQ9NRR6 644 aa10.03□□□□□ -0.8
CTDNEP1-205ENST00000570828 AASSQ9UDR5 926 aa10.03□□□□□ -0.8
CTDNEP1-205ENST00000570828 TBL2Q9Y4P3 447 aaKnown RBP10.03□□□□□ -0.8
CTDNEP1-205ENST00000570828 PCDHGB5Q9Y5G0 923 aa10.03□□□□□ -0.8
CTDNEP1-205ENST00000570828 LINC00312Q9Y6C7 94 aa10.03□□□□□ -0.8
CTDNEP1-205ENST00000570828 OR4C45A6NMZ5 311 aa10.02□□□□□ -0.81
CTDNEP1-205ENST00000570828 BPNT1O95861 308 aa10.02□□□□□ -0.81
CTDNEP1-205ENST00000570828 RPSAP08865 295 aaKnown RBP10.02□□□□□ -0.81
CTDNEP1-205ENST00000570828 GABRB1P18505 474 aa10.02□□□□□ -0.81
CTDNEP1-205ENST00000570828 DUSP1P28562 367 aa10.02□□□□□ -0.81
CTDNEP1-205ENST00000570828 PDZK1IP1Q13113 114 aa10.02□□□□□ -0.81
CTDNEP1-205ENST00000570828 DYNC1I2Q13409 638 aaKnown RBP10.02□□□□□ -0.81
CTDNEP1-205ENST00000570828 GALEQ14376 348 aa10.02□□□□□ -0.81
CTDNEP1-205ENST00000570828 ZNF146Q15072 292 aa10.02□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 63.3 ms