RNA–Protein interactions for RNA: ENST00000569916.1

CNOT1-220, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

TSL 3

Gene CNOT1, Length 599 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-220ENST00000569916 ZP1P60852 638 aa10.66□□□□□ -0.7
CNOT1-220ENST00000569916 SLC34A1Q06495 639 aa10.66□□□□□ -0.7
CNOT1-220ENST00000569916 ZNF146Q15072 292 aa10.66□□□□□ -0.7
CNOT1-220ENST00000569916 AWAT1Q58HT5 328 aa10.66□□□□□ -0.7
CNOT1-220ENST00000569916 NCR3LG1Q68D85 454 aa10.66□□□□□ -0.7
CNOT1-220ENST00000569916 ZNF529Q6P280 563 aa10.66□□□□□ -0.7
CNOT1-220ENST00000569916 C16orf87Q6PH81 154 aa10.66□□□□□ -0.7
CNOT1-220ENST00000569916 C17orf107Q6ZR85 190 aa10.66□□□□□ -0.7
CNOT1-220ENST00000569916 OR8H2Q8N162 312 aa10.66□□□□□ -0.7
CNOT1-220ENST00000569916 PNKDQ8N490 385 aa10.66□□□□□ -0.7
CNOT1-220ENST00000569916 C11orf42Q8N5U0 333 aa10.66□□□□□ -0.7
CNOT1-220ENST00000569916 TMEM86BQ8N661 226 aa10.66□□□□□ -0.7
CNOT1-220ENST00000569916 ZNF485Q8NCK3 441 aa10.66□□□□□ -0.7
CNOT1-220ENST00000569916 OR5D14Q8NGL3 314 aa10.66□□□□□ -0.7
CNOT1-220ENST00000569916 OR52N1Q8NH53 320 aa10.66□□□□□ -0.7
CNOT1-220ENST00000569916 TFAP2CQ92754 450 aa10.66□□□□□ -0.7
CNOT1-220ENST00000569916 SMIM19Q96E16 107 aa10.66□□□□□ -0.7
CNOT1-220ENST00000569916 CHIAQ9BZP6 476 aa10.66□□□□□ -0.7
CNOT1-220ENST00000569916 VCXQ9H320 206 aa10.66□□□□□ -0.7
CNOT1-220ENST00000569916 HMG20AQ9NP66 347 aa10.66□□□□□ -0.7
CNOT1-220ENST00000569916 FBN3Q75N90 2809 aa10.66□□□□□ -0.7
CNOT1-220ENST00000569916 EFCAB10A6NFE3 127 aa10.65□□□□□ -0.7
CNOT1-220ENST00000569916 OGG1O15527 345 aa10.65□□□□□ -0.7
CNOT1-220ENST00000569916 XPNPEP2O43895 674 aa10.65□□□□□ -0.7
CNOT1-220ENST00000569916 HCKP08631 526 aa10.65□□□□□ -0.7
CNOT1-220ENST00000569916 CALCBP10092 127 aa10.65□□□□□ -0.7
CNOT1-220ENST00000569916 CCL3L1P16619 93 aa10.65□□□□□ -0.7
CNOT1-220ENST00000569916 PRKACAP17612 351 aa10.65□□□□□ -0.7
CNOT1-220ENST00000569916 EEF1B2P24534 225 aaKnown RBP10.65□□□□□ -0.7
CNOT1-220ENST00000569916 SAA4P35542 130 aa10.65□□□□□ -0.7
CNOT1-220ENST00000569916 SOX2P48431 317 aa10.65□□□□□ -0.7
CNOT1-220ENST00000569916 SNU13P55769 128 aaKnown RBP10.65□□□□□ -0.7
CNOT1-220ENST00000569916 ST3GAL4Q11206 333 aa10.65□□□□□ -0.7
CNOT1-220ENST00000569916 FOXL1Q12952 345 aa10.65□□□□□ -0.7
CNOT1-220ENST00000569916 MED21Q13503 144 aa10.65□□□□□ -0.7
CNOT1-220ENST00000569916 SPIN3Q5JUX0 258 aa10.65□□□□□ -0.7
CNOT1-220ENST00000569916 FIP1L1Q6UN15 594 aaKnown RBP10.65□□□□□ -0.7
CNOT1-220ENST00000569916 TCF23Q7RTU1 214 aa10.65□□□□□ -0.7
CNOT1-220ENST00000569916 SAXO1Q8IYX7 474 aa10.65□□□□□ -0.7
CNOT1-220ENST00000569916 OR52N4Q8NGI2 321 aa10.65□□□□□ -0.7
CNOT1-220ENST00000569916 OR51A2Q8NGJ7 313 aa10.65□□□□□ -0.7
CNOT1-220ENST00000569916 OR5D13Q8NGL4 314 aa10.65□□□□□ -0.7
CNOT1-220ENST00000569916 TBC1D15Q8TC07 691 aa10.65□□□□□ -0.7
CNOT1-220ENST00000569916 GPR148Q8TDV2 347 aa10.65□□□□□ -0.7
CNOT1-220ENST00000569916 SSMEM1Q8WWF3 244 aa10.65□□□□□ -0.7
CNOT1-220ENST00000569916 NRG4Q8WWG1 115 aa10.65□□□□□ -0.7
CNOT1-220ENST00000569916 TAF15Q92804 592 aaKnown RBP eCLIP10.65□□□□□ -0.7
CNOT1-220ENST00000569916 SNX22Q96L94 193 aa10.65□□□□□ -0.7
CNOT1-220ENST00000569916 NEK6Q9HC98 313 aa10.65□□□□□ -0.7
CNOT1-220ENST00000569916 TNFRSF19Q9NS68 423 aa10.65□□□□□ -0.7
CNOT1-220ENST00000569916 PLCXD1Q9NUJ7 323 aa10.65□□□□□ -0.7
CNOT1-220ENST00000569916 BABAM2Q9NXR7 383 aa10.65□□□□□ -0.7
CNOT1-220ENST00000569916 CNOT2Q9NZN8 540 aaKnown RBP10.65□□□□□ -0.7
CNOT1-220ENST00000569916 ZNRD1Q9P1U0 126 aa10.65□□□□□ -0.7
CNOT1-220ENST00000569916 PSORS1C1Q9UIG5 152 aa10.65□□□□□ -0.7
CNOT1-220ENST00000569916 POMT1Q9Y6A1 747 aa10.65□□□□□ -0.7
CNOT1-220ENST00000569916 A0A1W2PPH5 198 aa10.64□□□□□ -0.71
CNOT1-220ENST00000569916 PSPNO60542 156 aa10.64□□□□□ -0.71
CNOT1-220ENST00000569916 IGHV4-59P01825 116 aa10.64□□□□□ -0.71
CNOT1-220ENST00000569916 FBP1P09467 338 aa10.64□□□□□ -0.71
CNOT1-220ENST00000569916 DUSP1P28562 367 aa10.64□□□□□ -0.71
CNOT1-220ENST00000569916 IER3P46695 156 aa10.64□□□□□ -0.71
CNOT1-220ENST00000569916 DLX6P56179 175 aa10.64□□□□□ -0.71
CNOT1-220ENST00000569916 EDDM3BP56851 147 aa10.64□□□□□ -0.71
CNOT1-220ENST00000569916 ACSM1Q08AH1 577 aa10.64□□□□□ -0.71
CNOT1-220ENST00000569916 KISS1Q15726 138 aa10.64□□□□□ -0.71
CNOT1-220ENST00000569916 DMKNQ6E0U4 476 aaPredicted RBP10.64□□□□□ -0.71
CNOT1-220ENST00000569916 AHSA2Q719I0 299 aa10.64□□□□□ -0.71
CNOT1-220ENST00000569916 GDPD3Q7L5L3 318 aa10.64□□□□□ -0.71
CNOT1-220ENST00000569916 OR13C5Q8NGS8 318 aa10.64□□□□□ -0.71
CNOT1-220ENST00000569916 TMEM106AQ96A25 262 aa10.64□□□□□ -0.71
CNOT1-220ENST00000569916 CHST6Q9GZX3 395 aa10.64□□□□□ -0.71
CNOT1-220ENST00000569916 FKBP14Q9NWM8 211 aa10.64□□□□□ -0.71
CNOT1-220ENST00000569916 CHCHD3Q9NX63 227 aaKnown RBP10.64□□□□□ -0.71
CNOT1-220ENST00000569916 TAS2R4Q9NYW5 299 aa10.64□□□□□ -0.71
CNOT1-220ENST00000569916 FAM96BQ9Y3D0 163 aa10.64□□□□□ -0.71
CNOT1-220ENST00000569916 TRBV5-5A0A0J9YX44 114 aa10.63□□□□□ -0.71
CNOT1-220ENST00000569916 MEX3AA1L020 520 aaKnown RBP10.63□□□□□ -0.71
CNOT1-220ENST00000569916 MEIOCA2RUB1 952 aa10.63□□□□□ -0.71
CNOT1-220ENST00000569916 FAM181BA6NEQ2 426 aa10.63□□□□□ -0.71
CNOT1-220ENST00000569916 ERICH4A6NGS2 130 aa10.63□□□□□ -0.71
CNOT1-220ENST00000569916 C17orf98A8MV24 154 aa10.63□□□□□ -0.71
CNOT1-220ENST00000569916 OR2H2O95918 312 aa10.63□□□□□ -0.71
CNOT1-220ENST00000569916 CD2P06729 351 aa10.63□□□□□ -0.71
CNOT1-220ENST00000569916 RAB3AP20336 220 aa10.63□□□□□ -0.71
CNOT1-220ENST00000569916 GABRR1P24046 479 aa10.63□□□□□ -0.71
CNOT1-220ENST00000569916 AQP4P55087 323 aa10.63□□□□□ -0.71
CNOT1-220ENST00000569916 ERVFRD-1P60508 538 aa10.63□□□□□ -0.71
CNOT1-220ENST00000569916 DOC2BQ14184 412 aa10.63□□□□□ -0.71
CNOT1-220ENST00000569916 EDDM3AQ14507 147 aa10.63□□□□□ -0.71
CNOT1-220ENST00000569916 GRK1Q15835 563 aa10.63□□□□□ -0.71
CNOT1-220ENST00000569916 C3orf56Q8N813 242 aa10.63□□□□□ -0.71
CNOT1-220ENST00000569916 ZFP41Q8N8Y5 198 aa10.63□□□□□ -0.71
CNOT1-220ENST00000569916 ZSCAN4Q8NAM6 433 aaPredicted RBP10.63□□□□□ -0.71
CNOT1-220ENST00000569916 BPIFB6Q8NFQ5 453 aa10.63□□□□□ -0.71
CNOT1-220ENST00000569916 OR4S1Q8NGB4 309 aa10.63□□□□□ -0.71
CNOT1-220ENST00000569916 PGLYRP3Q96LB9 341 aa10.63□□□□□ -0.71
CNOT1-220ENST00000569916 RHOFQ9HBH0 211 aa10.63□□□□□ -0.71
CNOT1-220ENST00000569916 EXOSC4Q9NPD3 245 aaKnown RBP10.63□□□□□ -0.71
CNOT1-220ENST00000569916 GSTK1Q9Y2Q3 226 aa10.63□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms